RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 TMEM177Q53S58 311 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 PRR30Q53SZ7 412 aaPredicted RBP9.91□□□□□ -0.82
VPS33B-201ENST00000333371 C19orf24Q9BVV8 132 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 CTSZQ9UBR2 303 aa9.91□□□□□ -0.82
VPS33B-201ENST00000333371 TCRBV4S1A1TA0A5B7 111 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 C17orf100A8MU93 164 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 SFTPCP11686 197 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 CTRLP40313 264 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 RBPJQ06330 500 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 BSPH1Q075Z2 132 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 LINC00322Q6ZN03 302 aaPredicted RBP9.9□□□□□ -0.82
VPS33B-201ENST00000333371 OR1B1Q8NGR6 318 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 CACNG8Q8WXS5 425 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 MBD6Q96DN6 1003 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 RNF2Q99496 336 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 SSUH2Q9Y2M2 353 aa9.9□□□□□ -0.82
VPS33B-201ENST00000333371 TLN1Q9Y490 2541 aaKnown RBP9.9□□□□□ -0.83
VPS33B-201ENST00000333371 HIGD1CA8MV81 97 aa9.9□□□□□ -0.83
VPS33B-201ENST00000333371 M0QZ24 198 aa9.9□□□□□ -0.83
VPS33B-201ENST00000333371 FAM87AP0C7U9 286 aa9.9□□□□□ -0.83
VPS33B-201ENST00000333371 TCF24Q7RTU0 167 aa9.9□□□□□ -0.83
VPS33B-201ENST00000333371 ARL6IP6Q8N6S5 226 aa9.9□□□□□ -0.83
VPS33B-201ENST00000333371 NUP37Q8NFH4 326 aa9.9□□□□□ -0.83
VPS33B-201ENST00000333371 OR4C13Q8NGP0 309 aa9.9□□□□□ -0.83
VPS33B-201ENST00000333371 TMEM167AQ8TBQ9 72 aa9.9□□□□□ -0.83
VPS33B-201ENST00000333371 SH2D7A6NKC9 451 aaPredicted RBP9.89□□□□□ -0.83
VPS33B-201ENST00000333371 MRGPRG-AS1Q2M3A8 158 aa9.89□□□□□ -0.83
VPS33B-201ENST00000333371 KIR3DL3Q8N743 410 aa9.89□□□□□ -0.83
VPS33B-201ENST00000333371 TOX4O94842 621 aa9.89□□□□□ -0.83
VPS33B-201ENST00000333371 SLC25A5P05141 298 aaKnown RBP9.89□□□□□ -0.83
VPS33B-201ENST00000333371 RPL19P84098 196 aaKnown RBP9.89□□□□□ -0.83
VPS33B-201ENST00000333371 PMCHL1Q16048 86 aa9.89□□□□□ -0.83
VPS33B-201ENST00000333371 OR4B1Q8NGF8 309 aa9.89□□□□□ -0.83
VPS33B-201ENST00000333371 CLEC7AQ9BXN2 247 aa9.89□□□□□ -0.83
VPS33B-201ENST00000333371 TP73-AS1Q9UF72 201 aa9.89□□□□□ -0.83
VPS33B-201ENST00000333371 PPIAL4EA0A075B759 164 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 PGPA6NDG6 321 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 PPIAL4DF5H284 164 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 DLEU1O43261 78 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 PPIAL4FP0DN26 164 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 TNFRSF1AP19438 455 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 PPP1R14DQ9NXH3 145 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 M0QZK8 103 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 HYPMO75409 117 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 PRRX1P54821 245 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 RNASEKQ6P5S7 137 aaKnown RBP9.88□□□□□ -0.83
VPS33B-201ENST00000333371 Q6ZVH6 145 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 OR2D3Q8NGH3 330 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 ASCL2Q99929 193 aa9.88□□□□□ -0.83
VPS33B-201ENST00000333371 TMEM178BH3BS89 294 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 THBDP07204 575 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 FOXA3P55318 350 aaPredicted RBP9.87□□□□□ -0.83
VPS33B-201ENST00000333371 EBLN2Q6P2I7 272 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 OR1L4Q8NGR5 311 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 ST6GALNAC6Q969X2 333 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 C7orf69Q9H7B7 122 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 TNFRSF19Q9NS68 423 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 ZNF835Q9Y2P0 537 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 MED13LQ71F56 2210 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 IGLC2P0DOY2 106 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 IGLC3P0DOY3 106 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 ATP5IP56385 69 aaPredicted RBP9.87□□□□□ -0.83
VPS33B-201ENST00000333371 BPIFB3P59826 476 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 UBE2G1P62253 170 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 MEF2CQ06413 473 aaPredicted RBP9.87□□□□□ -0.83
VPS33B-201ENST00000333371 C21orf62-AS1Q17RA5 79 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 Q6ZN92 141 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 SPATA12Q7Z6I5 190 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 PDPNQ86YL7 162 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 STPG4Q8N801 248 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 BORCS7Q96B45 105 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 GRAMD2BQ96HH9 432 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 TXN2Q99757 166 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 CLEC5AQ9NY25 188 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 WASHC3Q9Y3C0 194 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 MSRB2Q9Y3D2 182 aa9.87□□□□□ -0.83
VPS33B-201ENST00000333371 NDUFB3O43676 98 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 HSBP1O75506 76 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 LOXP28300 417 aaPredicted RBP9.86□□□□□ -0.83
VPS33B-201ENST00000333371 Q56UQ5 140 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 EPDR1Q9UM22 224 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 GOLT1BQ9Y3E0 138 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 SPTA1P02549 2419 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 TRAV8-1A0A0A6YYK1 113 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 IGLC7A0M8Q6 106 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 VSTM5A8MXK1 200 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 MYCNOSP40205 109 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 THAP8Q8NA92 274 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 IGFBPL1Q8WX77 278 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 M0R2Z0 102 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 COX19Q49B96 90 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 SSX8Q7RTT4 187 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 URB1-AS1Q96HZ7 61 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 ALKBH7Q9BT30 221 aaPredicted RBP9.86□□□□□ -0.83
VPS33B-201ENST00000333371 NGBQ9NPG2 151 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 JKAMPQ9P055 326 aa9.86□□□□□ -0.83
VPS33B-201ENST00000333371 WNK2Q9Y3S1 2297 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 LYNX1G3V0Z9 82 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 LYNX1P0DP58 116 aa9.85□□□□□ -0.83
VPS33B-201ENST00000333371 ZNF137PP52743 207 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms