RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 TMEM160Q9NX00 188 aa18.24■□□□□ 0.51
TSEN54-201ENST00000333213 GAR1Q9NY12 217 aaKnown RBP18.24■□□□□ 0.51
TSEN54-201ENST00000333213 IGLV11-55A0A075B6I3 123 aa18.23■□□□□ 0.51
TSEN54-201ENST00000333213 TRBV24-1A0A075B6N3 115 aa18.23■□□□□ 0.51
TSEN54-201ENST00000333213 SOX15O60248 233 aa18.23■□□□□ 0.51
TSEN54-201ENST00000333213 S100A2P29034 98 aa18.23■□□□□ 0.51
TSEN54-201ENST00000333213 ZNF343Q6P1L6 599 aa18.23■□□□□ 0.51
TSEN54-201ENST00000333213 TMEM144Q7Z5S9 345 aa18.23■□□□□ 0.51
TSEN54-201ENST00000333213 K7EIM0 57 aa18.23■□□□□ 0.51
TSEN54-201ENST00000333213 IGF1P05019 195 aa18.23■□□□□ 0.51
TSEN54-201ENST00000333213 CRIP2P52943 208 aaPredicted RBP18.23■□□□□ 0.51
TSEN54-201ENST00000333213 VSIRQ9H7M9 311 aa18.23■□□□□ 0.51
TSEN54-201ENST00000333213 MTORP42345 2549 aa18.23■□□□□ 0.51
TSEN54-201ENST00000333213 TGIF2-C20orf24A0A0A6YYL0 155 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 CYSRT1A8MQ03 144 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 CORTO00230 105 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST1H2BKO60814 126 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST1H2BJP06899 126 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST1H2BOP23527 126 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST1H2BBP33778 126 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 NDUFA6P56556 154 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST1H2BDP58876 126 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST1H2BCP62807 126 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST2H2BEQ16778 126 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST2H2BFQ5QNW6 126 aaPredicted RBP18.22■□□□□ 0.51
TSEN54-201ENST00000333213 TEPPQ6URK8 271 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 FAM110DQ8TAY7 271 aaPredicted RBP18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST1H2BHQ93079 126 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 ACY3Q96HD9 319 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST1H2BNQ99877 126 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 HIST1H2BMQ99879 126 aa18.22■□□□□ 0.51
TSEN54-201ENST00000333213 NPIPB3Q92617 1050 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 FAM210BQ96KR6 192 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 NOL4LQ96MY1 436 aaPredicted RBP18.21■□□□□ 0.51
TSEN54-201ENST00000333213 GGTLC1Q9BX51 225 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 MAP1LC3B2A6NCE7 125 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 ZFP92A6NM28 416 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 IFITM10A6NMD0 228 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 CYB5BO43169 146 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 MBP02144 154 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 CD99P14209 185 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 HNF1AP20823 631 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 ACSM6Q6P461 480 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 LCN15Q6UWW0 184 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 MAP1LC3BQ9GZQ8 125 aa18.21■□□□□ 0.51
TSEN54-201ENST00000333213 MPDU1O75352 247 aa18.2■□□□□ 0.5
TSEN54-201ENST00000333213 YIF1AO95070 293 aa18.2■□□□□ 0.5
TSEN54-201ENST00000333213 Q71RC1 249 aaPredicted RBP18.2■□□□□ 0.5
TSEN54-201ENST00000333213 OR1L6Q8NGR2 347 aa18.2■□□□□ 0.5
TSEN54-201ENST00000333213 SLC35E1Q96K37 410 aa18.2■□□□□ 0.5
TSEN54-201ENST00000333213 ZMAT5Q9UDW3 170 aaKnown RBP18.2■□□□□ 0.5
TSEN54-201ENST00000333213 IGKV1D-37A0A075B6S9 117 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 TRAV41A0A0B4J266 112 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 TMEM95Q3KNT9 176 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 TMEM116Q8NCL8 245 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 TMEM68Q96MH6 324 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 ESM1Q9NQ30 184 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 NAT8Q9UHE5 227 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 HIVEP2P31629 2446 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 TMEM250H0YL14 139 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 PPP1R2P9O14990 202 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 KLK9Q2XQG4 91 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 GSX1Q9H4S2 264 aaPredicted RBP18.19■□□□□ 0.5
TSEN54-201ENST00000333213 KLK9Q9UKQ9 250 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 URGCP-MRPS24S4R325 110 aa18.19■□□□□ 0.5
TSEN54-201ENST00000333213 OR2J3O76001 311 aa18.18■□□□□ 0.5
TSEN54-201ENST00000333213 NDUFB8O95169 186 aa18.18■□□□□ 0.5
TSEN54-201ENST00000333213 ELLP55199 621 aaPredicted RBP18.18■□□□□ 0.5
TSEN54-201ENST00000333213 ETFRF1Q6IPR1 90 aa18.18■□□□□ 0.5
TSEN54-201ENST00000333213 CYP2G1PQ6ZSU1 146 aa18.18■□□□□ 0.5
TSEN54-201ENST00000333213 S4R3C0 116 aa18.18■□□□□ 0.5
TSEN54-201ENST00000333213 GATCO43716 136 aaKnown RBP18.17■□□□□ 0.5
TSEN54-201ENST00000333213 TRGC2P03986 189 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 PPIFP30405 207 aaKnown RBP18.17■□□□□ 0.5
TSEN54-201ENST00000333213 MIC13Q5XKP0 118 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 SSX7Q7RTT5 188 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 SLC39A9Q9NUM3 307 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 NF1P21359 2839 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 TRBV9A0A0B4J1U6 114 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 GATA2P23769 480 aaPredicted RBP18.17■□□□□ 0.5
TSEN54-201ENST00000333213 OR10J1P30954 320 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 PYY3Q5JQD4 70 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 HIST3H2BBQ8N257 126 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 ZNF709Q8N972 641 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 THAP8Q8NA92 274 aa18.17■□□□□ 0.5
TSEN54-201ENST00000333213 CTXND1A0A1B0GTU2 59 aa18.16■□□□□ 0.5
TSEN54-201ENST00000333213 DNAJC9-AS1A6NH13 148 aa18.16■□□□□ 0.5
TSEN54-201ENST00000333213 TMEM86BQ8N661 226 aa18.16■□□□□ 0.5
TSEN54-201ENST00000333213 PYGO2Q9BRQ0 406 aa18.16■□□□□ 0.5
TSEN54-201ENST00000333213 MANBALQ9NQG1 85 aa18.16■□□□□ 0.5
TSEN54-201ENST00000333213 SLC45A2Q9UMX9 530 aa18.16■□□□□ 0.5
TSEN54-201ENST00000333213 C17orf112F2Z3M2 114 aa18.15■□□□□ 0.5
TSEN54-201ENST00000333213 PHOX2AO14813 284 aa18.15■□□□□ 0.5
TSEN54-201ENST00000333213 FOSL1P15407 271 aa18.15■□□□□ 0.5
TSEN54-201ENST00000333213 PRR20EP86478 221 aa18.15■□□□□ 0.5
TSEN54-201ENST00000333213 PRR20CP86479 221 aa18.15■□□□□ 0.5
TSEN54-201ENST00000333213 PRR20DP86480 221 aa18.15■□□□□ 0.5
TSEN54-201ENST00000333213 PRR20BP86481 221 aa18.15■□□□□ 0.5
TSEN54-201ENST00000333213 PRR20AP86496 221 aa18.15■□□□□ 0.5
TSEN54-201ENST00000333213 MEF2BQ02080 365 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms