RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 NRARPQ7Z6K4 114 aa20.46■□□□□ 0.87
ATPAF1-201ENST00000329231 KIR2DL5AQ8N109 375 aa20.46■□□□□ 0.87
ATPAF1-201ENST00000329231 OR4D5Q8NGN0 318 aa20.46■□□□□ 0.87
ATPAF1-201ENST00000329231 KIR2DL5BQ8NHK3 375 aa20.46■□□□□ 0.87
ATPAF1-201ENST00000329231 MAP6D1Q9H9H5 199 aa20.46■□□□□ 0.87
ATPAF1-201ENST00000329231 U3KQE9 123 aa20.46■□□□□ 0.87
ATPAF1-201ENST00000329231 WRBO00258 174 aa20.45■□□□□ 0.86
ATPAF1-201ENST00000329231 IL5P05113 134 aa20.45■□□□□ 0.86
ATPAF1-201ENST00000329231 EIF2B2P49770 351 aaKnown RBP20.45■□□□□ 0.86
ATPAF1-201ENST00000329231 IAH1Q2TAA2 248 aaPredicted RBP20.45■□□□□ 0.86
ATPAF1-201ENST00000329231 C12orf45Q8N5I9 185 aaPredicted RBP20.45■□□□□ 0.86
ATPAF1-201ENST00000329231 RABAC1Q9UI14 185 aa20.45■□□□□ 0.86
ATPAF1-201ENST00000329231 ZFP92A6NM28 416 aa20.44■□□□□ 0.86
ATPAF1-201ENST00000329231 PSG1P11464 419 aa20.44■□□□□ 0.86
ATPAF1-201ENST00000329231 RPL35AP18077 110 aaKnown RBP20.44■□□□□ 0.86
ATPAF1-201ENST00000329231 NKX2-1P43699 371 aaPredicted RBP20.44■□□□□ 0.86
ATPAF1-201ENST00000329231 Q6ZWC4 215 aa20.44■□□□□ 0.86
ATPAF1-201ENST00000329231 STPG3Q8N7X2 389 aa20.44■□□□□ 0.86
ATPAF1-201ENST00000329231 OVOL2Q9BRP0 275 aa20.44■□□□□ 0.86
ATPAF1-201ENST00000329231 USF2Q15853 346 aaPredicted RBP20.43■□□□□ 0.86
ATPAF1-201ENST00000329231 ZBTB8BQ8NAP8 495 aaPredicted RBP20.43■□□□□ 0.86
ATPAF1-201ENST00000329231 STXBP6Q8NFX7 210 aa20.43■□□□□ 0.86
ATPAF1-201ENST00000329231 OR51G1Q8NGK1 321 aa20.43■□□□□ 0.86
ATPAF1-201ENST00000329231 HELTA6NFD8 242 aa20.42■□□□□ 0.86
ATPAF1-201ENST00000329231 FABP1P07148 127 aa20.42■□□□□ 0.86
ATPAF1-201ENST00000329231 POLR2GP62487 172 aaKnown RBP eCLIP20.42■□□□□ 0.86
ATPAF1-201ENST00000329231 TP53TG1Q9Y2A0 90 aa20.42■□□□□ 0.86
ATPAF1-201ENST00000329231 AP2S1P53680 142 aaPredicted RBP20.41■□□□□ 0.86
ATPAF1-201ENST00000329231 ZNF124Q15973 351 aa20.41■□□□□ 0.86
ATPAF1-201ENST00000329231 SPANXN5Q5MJ07 72 aa20.41■□□□□ 0.86
ATPAF1-201ENST00000329231 C16orf54Q6UWD8 224 aa20.41■□□□□ 0.86
ATPAF1-201ENST00000329231 GPN1Q9HCN4 374 aaPredicted RBP20.41■□□□□ 0.86
ATPAF1-201ENST00000329231 GSKIPQ9P0R6 139 aa20.41■□□□□ 0.86
ATPAF1-201ENST00000329231 STRAPQ9Y3F4 350 aaKnown RBP20.41■□□□□ 0.86
ATPAF1-201ENST00000329231 CCSO14618 274 aa20.4■□□□□ 0.86
ATPAF1-201ENST00000329231 DEFB131AP59861 70 aa20.4■□□□□ 0.86
ATPAF1-201ENST00000329231 IL17DQ8TAD2 202 aa20.4■□□□□ 0.86
ATPAF1-201ENST00000329231 GLMPQ8WWB7 406 aa20.4■□□□□ 0.86
ATPAF1-201ENST00000329231 RNF125Q96EQ8 232 aa20.4■□□□□ 0.86
ATPAF1-201ENST00000329231 PFDN2Q9UHV9 154 aa20.4■□□□□ 0.86
ATPAF1-201ENST00000329231 IGKV1D-37A0A075B6S9 117 aa20.39■□□□□ 0.85
ATPAF1-201ENST00000329231 INMT-MINDY4F8WBC2 141 aa20.39■□□□□ 0.85
ATPAF1-201ENST00000329231 K7EQG2 157 aa20.39■□□□□ 0.85
ATPAF1-201ENST00000329231 SPRY2O43597 315 aa20.39■□□□□ 0.85
ATPAF1-201ENST00000329231 PRAF2O60831 178 aa20.39■□□□□ 0.85
ATPAF1-201ENST00000329231 SCGB1D2O95969 90 aa20.39■□□□□ 0.85
ATPAF1-201ENST00000329231 ZNF90Q03938 601 aa20.39■□□□□ 0.85
ATPAF1-201ENST00000329231 ZFAND6Q6FIF0 208 aa20.39■□□□□ 0.85
ATPAF1-201ENST00000329231 TRGV9Q99603 122 aa20.39■□□□□ 0.85
ATPAF1-201ENST00000329231 DNAH7Q8WXX0 4024 aa20.38■□□□□ 0.85
ATPAF1-201ENST00000329231 FAM25EA8MYX2 175 aa20.38■□□□□ 0.85
ATPAF1-201ENST00000329231 SSSCA1O60232 199 aa20.38■□□□□ 0.85
ATPAF1-201ENST00000329231 NUP62P37198 522 aaPredicted RBP20.38■□□□□ 0.85
ATPAF1-201ENST00000329231 DEFB135Q30KP9 77 aa20.38■□□□□ 0.85
ATPAF1-201ENST00000329231 FAM24BQ8N5W8 94 aa20.38■□□□□ 0.85
ATPAF1-201ENST00000329231 MARVELD1Q9BSK0 173 aa20.38■□□□□ 0.85
ATPAF1-201ENST00000329231 PBDC1Q9BVG4 233 aa20.38■□□□□ 0.85
ATPAF1-201ENST00000329231 KMT2CQ8NEZ4 4911 aaKnown RBP20.38■□□□□ 0.85
ATPAF1-201ENST00000329231 PRSS46E5RG02 174 aa20.37■□□□□ 0.85
ATPAF1-201ENST00000329231 H3BP45 60 aa20.37■□□□□ 0.85
ATPAF1-201ENST00000329231 BUB3O43684 328 aa20.37■□□□□ 0.85
ATPAF1-201ENST00000329231 OR8G2PQ6IF36 304 aa20.37■□□□□ 0.85
ATPAF1-201ENST00000329231 DCANP1Q8TF63 244 aa20.37■□□□□ 0.85
ATPAF1-201ENST00000329231 SMIM8Q96KF7 97 aa20.37■□□□□ 0.85
ATPAF1-201ENST00000329231 CSTL1Q9H114 145 aa20.37■□□□□ 0.85
ATPAF1-201ENST00000329231 PSENENQ9NZ42 101 aa20.37■□□□□ 0.85
ATPAF1-201ENST00000329231 C5orf51A6NDU8 294 aa20.36■□□□□ 0.85
ATPAF1-201ENST00000329231 SNRPGP15A8MWD9 76 aa20.36■□□□□ 0.85
ATPAF1-201ENST00000329231 LEMD1Q68G75 181 aa20.36■□□□□ 0.85
ATPAF1-201ENST00000329231 THAP8Q8NA92 274 aa20.36■□□□□ 0.85
ATPAF1-201ENST00000329231 RNF183Q96D59 192 aa20.36■□□□□ 0.85
ATPAF1-201ENST00000329231 RAB40CQ96S21 281 aa20.36■□□□□ 0.85
ATPAF1-201ENST00000329231 C2orf50Q96LR7 162 aa20.35■□□□□ 0.85
ATPAF1-201ENST00000329231 MBPP02686 304 aaPredicted RBP20.34■□□□□ 0.85
ATPAF1-201ENST00000329231 LYZP61626 148 aa20.34■□□□□ 0.85
ATPAF1-201ENST00000329231 GSG1LQ6UXU4 331 aa20.34■□□□□ 0.85
ATPAF1-201ENST00000329231 SIGLEC15Q6ZMC9 328 aa20.34■□□□□ 0.85
ATPAF1-201ENST00000329231 RCL1Q9Y2P8 373 aaKnown RBP20.34■□□□□ 0.85
ATPAF1-201ENST00000329231 IGKV1OR2-108A0A075B7D4 117 aa20.33■□□□□ 0.85
ATPAF1-201ENST00000329231 ZNF688P0C7X2 276 aa20.33■□□□□ 0.85
ATPAF1-201ENST00000329231 PAX9P55771 341 aa20.33■□□□□ 0.85
ATPAF1-201ENST00000329231 TAS2R30P59541 319 aa20.33■□□□□ 0.85
ATPAF1-201ENST00000329231 OR2F1Q13607 317 aa20.33■□□□□ 0.85
ATPAF1-201ENST00000329231 CFDP00746 253 aaPredicted RBP20.32■□□□□ 0.84
ATPAF1-201ENST00000329231 AKR1C1Q04828 323 aa20.32■□□□□ 0.84
ATPAF1-201ENST00000329231 ACOT7LQ6ZUV0 252 aa20.32■□□□□ 0.84
ATPAF1-201ENST00000329231 STHQ8IWL8 128 aa20.32■□□□□ 0.84
ATPAF1-201ENST00000329231 NRN1Q9NPD7 142 aa20.32■□□□□ 0.84
ATPAF1-201ENST00000329231 TSC22D2O75157 780 aa20.31■□□□□ 0.84
ATPAF1-201ENST00000329231 TMEM14EPQ6UXP3 125 aa20.3■□□□□ 0.84
ATPAF1-201ENST00000329231 SNRPD3P62318 126 aaKnown RBP20.29■□□□□ 0.84
ATPAF1-201ENST00000329231 C1orf194Q5T5A4 169 aa20.29■□□□□ 0.84
ATPAF1-201ENST00000329231 TMEM144Q7Z5S9 345 aa20.29■□□□□ 0.84
ATPAF1-201ENST00000329231 GATAD1Q8WUU5 269 aa20.29■□□□□ 0.84
ATPAF1-201ENST00000329231 PPP1R14BQ96C90 147 aa20.29■□□□□ 0.84
ATPAF1-201ENST00000329231 SEPSECSQ9HD40 501 aaKnown RBP20.29■□□□□ 0.84
ATPAF1-201ENST00000329231 FBXL17Q9UF56 701 aa20.29■□□□□ 0.84
ATPAF1-201ENST00000329231 LSM5Q9Y4Y9 91 aaKnown RBP20.29■□□□□ 0.84
ATPAF1-201ENST00000329231 C7orf66A4D0T2 115 aa20.28■□□□□ 0.84
ATPAF1-201ENST00000329231 K7EPK0 472 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms