RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ACP7Q6ZNF0 438 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 GDF15Q99988 308 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 PTPRBP23467 1997 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 H0YIZ8 118 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 TIAF1O95411 115 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 IGKCP01834 107 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 VDAC2P45880 294 aaPredicted RBP6.62□□□□□ -1.35
CIITA-201ENST00000324288 OR5P3Q8WZ94 311 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 LAMTOR3Q9UHA4 124 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 RNF222A6NCQ9 220 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 CD200R1LQ6Q8B3 271 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 SPATA31B1PQ5VZV4 182 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 PRSS57Q6UWY2 283 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 HAPLN4Q86UW8 402 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 UBE2DNLQ8IWF7 75 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 TMEM186Q96B77 213 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 TMEM14DPA8MWL7 114 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 COLCA2A8K830 154 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 TIMP3P35625 211 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 UCNP55089 124 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 OTORQ9NRC9 128 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 HS3ST3B1Q9Y662 390 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 GLRXP35754 106 aa6.62□□□□□ -1.35
CIITA-201ENST00000324288 C1orf162Q8NEQ5 155 aaPredicted RBP6.62□□□□□ -1.35
CIITA-201ENST00000324288 FAM27E3Q08E93 113 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 COLCA1Q6ZS62 124 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 TSSC4Q9Y5U2 329 aaPredicted RBP6.61□□□□□ -1.35
CIITA-201ENST00000324288 PKIBQ9C010 78 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 C21orf62Q9NYP8 219 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 RBMY1BA6NDE4 496 aaKnown RBP6.61□□□□□ -1.35
CIITA-201ENST00000324288 RBMY1EA6NEQ0 496 aaKnown RBP6.61□□□□□ -1.35
CIITA-201ENST00000324288 RBMY1DP0C7P1 496 aaKnown RBP6.61□□□□□ -1.35
CIITA-201ENST00000324288 RBMY1A1P0DJD3 496 aaKnown RBP6.61□□□□□ -1.35
CIITA-201ENST00000324288 RBMY1CP0DJD4 496 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 FDCSPQ8NFU4 85 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 CFHR5Q9BXR6 569 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 OR13A1Q8NGR1 328 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 GUSBP1Q15486 140 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 JPT1Q9UK76 154 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 MARF1Q9Y4F3 1742 aaKnown RBP6.61□□□□□ -1.35
CIITA-201ENST00000324288 DENND4CQ5VZ89 1909 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 CECR9P0C854 216 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 BTCP35070 178 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 FOXH1O75593 365 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 HBDP02042 147 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 PSG3Q16557 428 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 ZNF474Q6S9Z5 364 aaPredicted RBP6.61□□□□□ -1.35
CIITA-201ENST00000324288 FAM168AQ92567 244 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 FMC1Q96HJ9 113 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 C7orf69Q9H7B7 122 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 PTGDSP41222 190 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 DLX4Q92988 240 aaPredicted RBP6.61□□□□□ -1.35
CIITA-201ENST00000324288 MBNL3Q9NUK0 354 aaKnown RBP6.61□□□□□ -1.35
CIITA-201ENST00000324288 RNF126Q9BV68 326 aa6.61□□□□□ -1.35
CIITA-201ENST00000324288 WISP3O95389 354 aaPredicted RBP6.6□□□□□ -1.35
CIITA-201ENST00000324288 CRPP02741 224 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 GAGE2AQ6NT46 116 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 ATP5L2Q7Z4Y8 100 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 GLI3P10071 1580 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 TCRBV4S1A1TA0A5B7 111 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 ERVK11-1P61568 191 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 IGKV1D-8A0A087WSZ0 117 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 FAM231BA6NCW3 169 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 TOMM40O96008 361 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 ACTL10Q5JWF8 245 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 C1orf194Q5T5A4 169 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 LINC00527Q9UJ94 153 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 PSG8Q9UQ74 426 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 LYNX1G3V0Z9 82 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 NPSP0C0P6 89 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 LYNX1P0DP58 116 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 STHQ8IWL8 128 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 ZCCHC24Q8N2G6 241 aaKnown RBP6.6□□□□□ -1.35
CIITA-201ENST00000324288 TRGV4A0A0C4DH28 118 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 C9orf153Q5TBE3 101 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 ZNF664Q8N3J9 261 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 INS-IGF2F8WCM5 200 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 INSP01308 110 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 LY6G6FQ5SQ64 297 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 C12orf77C9JDV5 145 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 PAX4O43316 350 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 LINC01590Q5TEZ4 76 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 DNM1P46Q6ZS02 220 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 VGLL1Q99990 258 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 A0A1W2PRE2 83 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 RS1O15537 224 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 RAMP3O60896 148 aa6.6□□□□□ -1.35
CIITA-201ENST00000324288 CDK2AP2O75956 126 aa6.59□□□□□ -1.35
CIITA-201ENST00000324288 SAXO1Q8IYX7 474 aa6.59□□□□□ -1.35
CIITA-201ENST00000324288 PILRAQ9UKJ1 303 aa6.59□□□□□ -1.35
CIITA-201ENST00000324288 IGKV1D-13A0A0B4J2D9 117 aa6.59□□□□□ -1.35
CIITA-201ENST00000324288 B9A039 149 aa6.59□□□□□ -1.35
CIITA-201ENST00000324288 IGKV1-13P0DP09 117 aa6.59□□□□□ -1.35
CIITA-201ENST00000324288 PIEZO1Q92508 2521 aa6.59□□□□□ -1.35
CIITA-201ENST00000324288 LGALS1P09382 135 aaKnown RBP6.59□□□□□ -1.35
CIITA-201ENST00000324288 RPL35AP18077 110 aaKnown RBP6.59□□□□□ -1.35
CIITA-201ENST00000324288 RIPPLY2Q5TAB7 128 aa6.59□□□□□ -1.35
CIITA-201ENST00000324288 SIGLEC12Q96PQ1 595 aa6.59□□□□□ -1.35
CIITA-201ENST00000324288 C19orf24Q9BVV8 132 aa6.59□□□□□ -1.35
CIITA-201ENST00000324288 UMODP07911 640 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms