RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 SCRT1Q9BWW7 348 aa8.92□□□□□ -0.98
TPM3-204ENST00000323144 NRN1Q9NPD7 142 aa8.92□□□□□ -0.98
TPM3-204ENST00000323144 TBC1D24Q9ULP9 559 aa8.92□□□□□ -0.98
TPM3-204ENST00000323144 APLNQ9ULZ1 77 aa8.92□□□□□ -0.98
TPM3-204ENST00000323144 A0A0B4J2A0 478 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 BUB3O43684 328 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 IFNA4P05014 189 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 IAPPP10997 89 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 EIF2B2P49770 351 aaKnown RBP8.91□□□□□ -0.98
TPM3-204ENST00000323144 ZNF90Q03938 601 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 LGI3Q8N145 548 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 RNF125Q96EQ8 232 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 RAB40CQ96S21 281 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 WDR12Q9GZL7 423 aaKnown RBP8.91□□□□□ -0.98
TPM3-204ENST00000323144 HRH4Q9H3N8 390 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 XCL2Q9UBD3 114 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 SHPKQ9UHJ6 478 aa8.91□□□□□ -0.98
TPM3-204ENST00000323144 RD3LP0DJH9 198 aa8.9□□□□□ -0.98
TPM3-204ENST00000323144 HLA-DRB4P13762 266 aa8.9□□□□□ -0.98
TPM3-204ENST00000323144 CCR6P51684 374 aa8.9□□□□□ -0.98
TPM3-204ENST00000323144 LYZP61626 148 aa8.9□□□□□ -0.98
TPM3-204ENST00000323144 KLF9Q13886 244 aaPredicted RBP8.9□□□□□ -0.98
TPM3-204ENST00000323144 TMEM41BQ5BJD5 291 aa8.9□□□□□ -0.98
TPM3-204ENST00000323144 ETFRF1Q6IPR1 90 aa8.9□□□□□ -0.98
TPM3-204ENST00000323144 TMED4Q7Z7H5 227 aa8.9□□□□□ -0.98
TPM3-204ENST00000323144 SCP2D1Q9UJQ7 156 aa8.9□□□□□ -0.98
TPM3-204ENST00000323144 V9GYH0 126 aa8.9□□□□□ -0.98
TPM3-204ENST00000323144 HLA-DRB4X5D2U9 266 aa8.9□□□□□ -0.98
TPM3-204ENST00000323144 IGHV4-4A0A075B6R2 117 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 ZFP92A6NM28 416 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 H3BMM0 161 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 SOCS3O14543 225 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 IGKV3-20P01619 116 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 TNFSF8P32971 234 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 TMBIM6P55061 237 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 FXYD7P58549 80 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 SNRPD3P62318 126 aaKnown RBP8.89□□□□□ -0.99
TPM3-204ENST00000323144 OR2F1Q13607 317 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 ZNF79Q15937 498 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 OR1S1Q8NH92 325 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 MCFD2Q8NI22 146 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 SLC35E1Q96K37 410 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 SOSTQ9BQB4 213 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 BCL7BQ9BQE9 202 aa8.89□□□□□ -0.99
TPM3-204ENST00000323144 RSL24D1Q9UHA3 163 aaKnown RBP8.89□□□□□ -0.99
TPM3-204ENST00000323144 IGKV1OR2-108A0A075B7D4 117 aa8.88□□□□□ -0.99
TPM3-204ENST00000323144 TRAV10A0A0B4J240 114 aa8.88□□□□□ -0.99
TPM3-204ENST00000323144 C11orf94C9JXX5 98 aa8.88□□□□□ -0.99
TPM3-204ENST00000323144 NOL3O60936 208 aaKnown RBP8.88□□□□□ -0.99
TPM3-204ENST00000323144 AMBPP02760 352 aa8.88□□□□□ -0.99
TPM3-204ENST00000323144 SRPXP78539 464 aa8.88□□□□□ -0.99
TPM3-204ENST00000323144 GAMTQ14353 236 aa8.88□□□□□ -0.99
TPM3-204ENST00000323144 RABL2AQ9UBK7 228 aaPredicted RBP8.88□□□□□ -0.99
TPM3-204ENST00000323144 RABL2BQ9UNT1 228 aa8.88□□□□□ -0.99
TPM3-204ENST00000323144 FABP12A6NFH5 140 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 F6UB75 175 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 PITX3O75364 302 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 VAMP1P23763 118 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 C12orf74Q32Q52 190 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 OR8G2PQ6IF36 304 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 NOXA1Q86UR1 476 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 ZNF709Q8N972 641 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 KRTAP17-1Q9BYP8 105 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 KCNIP3Q9Y2W7 256 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 U3KQ87 197 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 FAT2Q9NYQ8 4349 aa8.87□□□□□ -0.99
TPM3-204ENST00000323144 PRSS46E5RG02 174 aa8.86□□□□□ -0.99
TPM3-204ENST00000323144 H3BP45 60 aa8.86□□□□□ -0.99
TPM3-204ENST00000323144 ANXA3P12429 323 aa8.86□□□□□ -0.99
TPM3-204ENST00000323144 NKX2-1P43699 371 aaPredicted RBP8.86□□□□□ -0.99
TPM3-204ENST00000323144 AP2S1P53680 142 aaPredicted RBP8.86□□□□□ -0.99
TPM3-204ENST00000323144 TCTAP57738 103 aa8.86□□□□□ -0.99
TPM3-204ENST00000323144 PPP1R1AQ13522 171 aa8.86□□□□□ -0.99
TPM3-204ENST00000323144 SCGB3A2Q96PL1 93 aa8.86□□□□□ -0.99
TPM3-204ENST00000323144 MAGT1Q9H0U3 335 aa8.86□□□□□ -0.99
TPM3-204ENST00000323144 SLC35B3Q9H1N7 401 aa8.86□□□□□ -0.99
TPM3-204ENST00000323144 SLC25A32Q9H2D1 315 aa8.86□□□□□ -0.99
TPM3-204ENST00000323144 PAIP2BQ9ULR5 123 aaKnown RBP8.86□□□□□ -0.99
TPM3-204ENST00000323144 IGHV3OR16-12A0A075B7B8 117 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 DEFB131BA0A096LNP1 70 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 DUXBA0A1W2PPF3 345 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 ZNF705FA8MVS1 300 aaPredicted RBP8.85□□□□□ -0.99
TPM3-204ENST00000323144 ZNF705DP0CH99 300 aaPredicted RBP8.85□□□□□ -0.99
TPM3-204ENST00000323144 ZNF705BP0CI00 300 aaPredicted RBP8.85□□□□□ -0.99
TPM3-204ENST00000323144 NUP62P37198 522 aaPredicted RBP8.85□□□□□ -0.99
TPM3-204ENST00000323144 PSMB3P49720 205 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 PYDC2Q56P42 97 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 ZNF705AQ6ZN79 300 aaPredicted RBP8.85□□□□□ -0.99
TPM3-204ENST00000323144 THAP8Q8NA92 274 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 COQ8AQ8NI60 647 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 C20orf173Q96LM9 149 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 LINC00052Q96N35 136 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 C1QTNF4Q9BXJ3 329 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 SAV1Q9H4B6 383 aaPredicted RBP8.85□□□□□ -0.99
TPM3-204ENST00000323144 CACFD1Q9UGQ2 172 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 DNAH2Q9P225 4427 aa8.85□□□□□ -0.99
TPM3-204ENST00000323144 FAUP35544 74 aaKnown RBP8.84□□□□□ -0.99
TPM3-204ENST00000323144 EMP1P54849 157 aa8.84□□□□□ -0.99
TPM3-204ENST00000323144 TMEM128Q5BJH2 165 aa8.84□□□□□ -0.99
TPM3-204ENST00000323144 FOXI2Q6ZQN5 318 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms