RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 DNAH17Q9UFH2 4485 aa10.39□□□□□ -0.75
RPP40-201ENST00000319533 DNAH2Q9P225 4427 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 IGHV3-49A0A0A0MS15 119 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 TRAV2A0A0B4J234 112 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 RPS10-NUDT3A0A1W2PQS6 291 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 C9orf170A2RU37 121 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 PRAF2O60831 178 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 DFFBO76075 338 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 TFPI2P48307 235 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 DHRS2Q13268 280 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 BSXQ3C1V8 233 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 NMSQ5H8A3 153 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 NOXA1Q86UR1 476 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 SLC24A4Q8NFF2 622 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 C2CD4CQ8TF44 421 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 PCLOQ9Y6V0 5065 aa10.38□□□□□ -0.75
RPP40-201ENST00000319533 NXPH3O95157 252 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 SFT2D2O95562 160 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 PAFAH1B2P68402 229 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 C4orf46Q504U0 113 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 TOMM20LQ6UXN7 152 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 TCF24Q7RTU0 167 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 LILRB2Q8N423 598 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 GBGT1Q8N5D6 347 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 OR1S1Q8NH92 325 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 ZNF431Q8TF32 576 aaPredicted RBP10.37□□□□□ -0.75
RPP40-201ENST00000319533 GINS3Q9BRX5 216 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 HRH4Q9H3N8 390 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 FBXL17Q9UF56 701 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 APLNQ9ULZ1 77 aa10.37□□□□□ -0.75
RPP40-201ENST00000319533 IGKV3-7A0A075B6H7 116 aa10.36□□□□□ -0.75
RPP40-201ENST00000319533 A0A1B0GU03 582 aa10.36□□□□□ -0.75
RPP40-201ENST00000319533 CA1P00915 261 aaPredicted RBP10.36□□□□□ -0.75
RPP40-201ENST00000319533 FCN2Q15485 313 aa10.36□□□□□ -0.75
RPP40-201ENST00000319533 C2orf83Q53S99 150 aa10.36□□□□□ -0.75
RPP40-201ENST00000319533 LRTM2Q8N967 370 aa10.36□□□□□ -0.75
RPP40-201ENST00000319533 RNASEH2CQ8TDP1 164 aaKnown RBP10.36□□□□□ -0.75
RPP40-201ENST00000319533 DTD1Q8TEA8 209 aa10.36□□□□□ -0.75
RPP40-201ENST00000319533 ST8SIA2Q92186 375 aa10.36□□□□□ -0.75
RPP40-201ENST00000319533 MS4A6AQ9H2W1 248 aa10.36□□□□□ -0.75
RPP40-201ENST00000319533 HSPB7Q9UBY9 170 aa10.36□□□□□ -0.75
RPP40-201ENST00000319533 IGHV3OR16-13A0A075B7E8 117 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 IGHV3-74A0A0B4J1X5 117 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 SNRPGP15A8MWD9 76 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 C11orf94C9JXX5 98 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 CLN5O75503 358 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 IFNA10P01566 189 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 APOHP02749 345 aaPredicted RBP10.35□□□□□ -0.75
RPP40-201ENST00000319533 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
RPP40-201ENST00000319533 NPY1RP25929 384 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 RRAS2P62070 204 aaPredicted RBP10.35□□□□□ -0.75
RPP40-201ENST00000319533 CD300CQ08708 224 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 ETFRF1Q6IPR1 90 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 ZNF600Q6ZNG1 722 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 Q8NAQ8 132 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 OR11H7Q8NGC8 314 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 OR4X1Q8NH49 305 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 CHAC2Q8WUX2 184 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 TMED3Q9Y3Q3 217 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 U3KQ87 197 aa10.35□□□□□ -0.75
RPP40-201ENST00000319533 TRAV30A0A087WSZ9 112 aa10.34□□□□□ -0.75
RPP40-201ENST00000319533 DEFB4AO15263 64 aa10.34□□□□□ -0.75
RPP40-201ENST00000319533 TMEM50AO95807 157 aa10.34□□□□□ -0.75
RPP40-201ENST00000319533 SLC25A4P12235 298 aa10.34□□□□□ -0.75
RPP40-201ENST00000319533 SLC25A6P12236 298 aa10.34□□□□□ -0.75
RPP40-201ENST00000319533 DEFB131AP59861 70 aa10.34□□□□□ -0.75
RPP40-201ENST00000319533 FAM24BQ8N5W8 94 aa10.34□□□□□ -0.75
RPP40-201ENST00000319533 MITD1Q8WV92 249 aa10.34□□□□□ -0.75
RPP40-201ENST00000319533 RBKSQ9H477 322 aa10.34□□□□□ -0.75
RPP40-201ENST00000319533 FNDC4Q9H6D8 234 aaPredicted RBP10.34□□□□□ -0.75
RPP40-201ENST00000319533 GPN1Q9HCN4 374 aaPredicted RBP10.34□□□□□ -0.75
RPP40-201ENST00000319533 PUS1Q9Y606 427 aaKnown RBP eCLIP10.34□□□□□ -0.75
RPP40-201ENST00000319533 PKHD1P08F94 4074 aa10.33□□□□□ -0.76
RPP40-201ENST00000319533 DYNC1H1Q14204 4646 aaKnown RBP10.33□□□□□ -0.76
RPP40-201ENST00000319533 DNASE2O00115 360 aaPredicted RBP10.33□□□□□ -0.76
RPP40-201ENST00000319533 HOXB5P09067 269 aa10.33□□□□□ -0.76
RPP40-201ENST00000319533 CXCL3P19876 107 aa10.33□□□□□ -0.76
RPP40-201ENST00000319533 ATP5IP56385 69 aaPredicted RBP10.33□□□□□ -0.76
RPP40-201ENST00000319533 MLANAQ16655 118 aa10.33□□□□□ -0.76
RPP40-201ENST00000319533 TMEM41BQ5BJD5 291 aa10.33□□□□□ -0.76
RPP40-201ENST00000319533 LEMD1Q68G75 181 aa10.33□□□□□ -0.76
RPP40-201ENST00000319533 C12orf45Q8N5I9 185 aaPredicted RBP10.33□□□□□ -0.76
RPP40-201ENST00000319533 OR1S2Q8NGQ3 325 aa10.33□□□□□ -0.76
RPP40-201ENST00000319533 COQ8AQ8NI60 647 aa10.33□□□□□ -0.76
RPP40-201ENST00000319533 MED28Q9H204 178 aa10.33□□□□□ -0.76
RPP40-201ENST00000319533 DNAH11Q96DT5 4516 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 ZNF705EA8MWA4 302 aaPredicted RBP10.32□□□□□ -0.76
RPP40-201ENST00000319533 FAM90A26D6RGX4 464 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 CCSO14618 274 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 SSNA1O43805 119 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 MED6O75586 246 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 RBMY1A1P0DJD3 496 aaKnown RBP10.32□□□□□ -0.76
RPP40-201ENST00000319533 RBMY1CP0DJD4 496 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 RND2P52198 227 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 RBMY1FQ15415 496 aaKnown RBP10.32□□□□□ -0.76
RPP40-201ENST00000319533 PRSS54Q6PEW0 395 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 TRPT1Q86TN4 253 aaKnown RBP10.32□□□□□ -0.76
RPP40-201ENST00000319533 GRAMD2BQ96HH9 432 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 TMEM231Q9H6L2 316 aa10.32□□□□□ -0.76
RPP40-201ENST00000319533 MRPL36Q9P0J6 103 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms