RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 SLC25A5P05141 298 aaKnown RBP11.92□□□□□ -0.5
CHFR-202ENST00000315585 CEACAM3P40198 252 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 MYCNOSP40205 109 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 PLGLAQ15195 96 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 C5orf17Q8NAS9 161 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 FMC1Q96HJ9 113 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 GPR82Q96P67 336 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 KLF12Q9Y4X4 402 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 ATP5L2Q7Z4Y8 100 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 RITA1Q96K30 269 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 ATG101Q9BSB4 218 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 ZNF586Q9NXT0 402 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 CACNA1AO00555 2505 aa11.92□□□□□ -0.5
CHFR-202ENST00000315585 PGPA6NDG6 321 aa11.91□□□□□ -0.5
CHFR-202ENST00000315585 ZNF705FA8MVS1 300 aaPredicted RBP11.91□□□□□ -0.5
CHFR-202ENST00000315585 GOSR1O95249 250 aa11.91□□□□□ -0.5
CHFR-202ENST00000315585 APCSP02743 223 aa11.91□□□□□ -0.5
CHFR-202ENST00000315585 ZNF705DP0CH99 300 aaPredicted RBP11.91□□□□□ -0.5
CHFR-202ENST00000315585 ZNF705BP0CI00 300 aaPredicted RBP11.91□□□□□ -0.5
CHFR-202ENST00000315585 HIGD1AQ9Y241 93 aa11.91□□□□□ -0.5
CHFR-202ENST00000315585 C22orf46C9J442 243 aa11.91□□□□□ -0.5
CHFR-202ENST00000315585 LINC00469Q8N7U9 141 aa11.91□□□□□ -0.5
CHFR-202ENST00000315585 TSKUQ8WUA8 353 aa11.91□□□□□ -0.5
CHFR-202ENST00000315585 SRSF12Q8WXF0 261 aaKnown RBP11.91□□□□□ -0.5
CHFR-202ENST00000315585 ANKHD1Q8IWZ3 2542 aaKnown RBP11.9□□□□□ -0.5
CHFR-202ENST00000315585 NUPR1O60356 82 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 ZNF253O75346 499 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 IGHV3-48P01763 117 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 MRPL36Q9P0J6 103 aaKnown RBP11.9□□□□□ -0.5
CHFR-202ENST00000315585 SOX21Q9Y651 276 aaPredicted RBP11.9□□□□□ -0.5
CHFR-202ENST00000315585 MOSP00540 346 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 HTR1DP28221 377 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 TCL1AP56279 114 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 CT83Q5H943 113 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 MBD6Q96DN6 1003 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 RASL11BQ9BPW5 248 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 HSPB9Q9BQS6 159 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 C2orf88Q9BSF0 95 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 TMEM14CQ9P0S9 112 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 TP53TG3Q9ULZ0 132 aa11.9□□□□□ -0.5
CHFR-202ENST00000315585 ROS1P08922 2347 aa11.9□□□□□ -0.51
CHFR-202ENST00000315585 CNIH1O95406 144 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 COX7A1P24310 79 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 FAM162BQ5T6X4 162 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 LY6G5BQ8NDX9 201 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 NUDT10Q8NFP7 164 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 NUDT11Q96G61 164 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 TMEM68Q96MH6 324 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 TBX15Q96SF7 602 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 GNB4Q9HAV0 340 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 DPM3Q9P2X0 92 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 TEX22C9J3V5 150 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 LY6LH3BQJ8 138 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 SPINK4O60575 86 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 TOMM40O96008 361 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 GPX1P07203 203 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 ATRXP46100 2492 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 MFAP2P55001 183 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 MRPL54Q6P161 138 aaKnown RBP11.89□□□□□ -0.51
CHFR-202ENST00000315585 MRPL52Q86TS9 123 aaKnown RBP11.89□□□□□ -0.51
CHFR-202ENST00000315585 BLNKQ8WV28 456 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 KCNS1Q96KK3 526 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 LINC00479Q96M42 142 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 MRPL27Q9P0M9 148 aaKnown RBP11.89□□□□□ -0.51
CHFR-202ENST00000315585 ONECUT1Q9UBC0 465 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 PKDREJQ9NTG1 2253 aa11.89□□□□□ -0.51
CHFR-202ENST00000315585 KIR2DL5BA0A0G2JN68 375 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 KIR2DL5BA0A0G2JPC4 375 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 A0A1B0GUS0 222 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 A8MWL6 223 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 M0R1W7 72 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 SSTP61278 116 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 TOMM20LQ6UXN7 152 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 KIR2DL5AQ8N109 375 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 OR11H6Q8NGC7 330 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 DAZAP1Q96EP5 407 aaKnown RBP11.88□□□□□ -0.51
CHFR-202ENST00000315585 FBXL15Q9H469 300 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 UBTD1Q9HAC8 227 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 OTORQ9NRC9 128 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 COL6A6A6NMZ7 2263 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 TPTE2P1Q5T6R2 138 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 CHD8Q9HCK8 2581 aa11.88□□□□□ -0.51
CHFR-202ENST00000315585 A6NNC1 897 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 IGLC1P0CG04 106 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 GP9P14770 177 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 CNTFRP26992 372 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 SRIP30626 198 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 Q6ZWC4 215 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 NHLRC2Q8NBF2 726 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 ZNF492Q9P255 531 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 POLR3KQ9Y2Y1 108 aaPredicted RBP11.87□□□□□ -0.51
CHFR-202ENST00000315585 TRAV30A0A087WSZ9 112 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 TRAV34A0A0B4J273 112 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 FAM231BA6NCW3 169 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 BMPR1BO00238 502 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 SLC35B1P78383 322 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 MMDQ15546 238 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 TEX43Q6ZNM6 134 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 C19orf35Q6ZS72 473 aa11.87□□□□□ -0.51
CHFR-202ENST00000315585 WNT10AQ9GZT5 417 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms