RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 GPHB5Q86YW7 130 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 TGIF2LXQ8IUE1 241 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 GCNT2Q8N0V5 402 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 ZNF430Q9H8G1 570 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-201ENST00000315544 BEX4Q9NWD9 120 aaPredicted RBP6.1□□□□□ -1.43
CNOT4-201ENST00000315544 DOPEY1Q5JWR5 2465 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 IGHV3OR15-7A0A075B7D8 119 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 NPSP0C0P6 89 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 PAFAH1B2P68402 229 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 MMD2Q8IY49 270 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 NANOS1Q8WY41 292 aaKnown RBP6.1□□□□□ -1.43
CNOT4-201ENST00000315544 RNF185Q96GF1 192 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 SRSF8Q9BRL6 282 aaKnown RBP6.1□□□□□ -1.43
CNOT4-201ENST00000315544 PRKDCP78527 4128 aaKnown RBP6.1□□□□□ -1.43
CNOT4-201ENST00000315544 C3orf79P0CE67 100 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 IGLC6P0CF74 106 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 ZNF674Q2M3X9 581 aa6.1□□□□□ -1.43
CNOT4-201ENST00000315544 MRPL18Q9H0U6 180 aaKnown RBP6.1□□□□□ -1.43
CNOT4-201ENST00000315544 CBY3A6NI87 242 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 J3QR06 171 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 SPINT2O43291 252 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 DYNAPQ8N1N2 210 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 NUDT10Q8NFP7 164 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 OR2T6Q8NHC8 308 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 NUDT11Q96G61 164 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 MRPS16Q9Y3D3 137 aaKnown RBP6.09□□□□□ -1.43
CNOT4-201ENST00000315544 CNTFRP26992 372 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 FAM78BQ5VT40 261 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 C19orf35Q6ZS72 473 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 LINC00173Q6ZV60 143 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 PDPNQ86YL7 162 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 MRPL41Q8IXM3 137 aaKnown RBP6.09□□□□□ -1.43
CNOT4-201ENST00000315544 OR4S2Q8NH73 311 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 OR51B2Q9Y5P1 312 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 DNAH9Q9NYC9 4486 aa6.09□□□□□ -1.43
CNOT4-201ENST00000315544 URB1O60287 2271 aaKnown RBP6.09□□□□□ -1.43
CNOT4-201ENST00000315544 A0A1W2PN81 502 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 PCP4L1A6NKN8 68 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 IFNA5P01569 189 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 COL8A1P27658 744 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 CHRNA7P36544 502 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 RAB7AP51149 207 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 SELENOVP59797 346 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 RBPJQ06330 500 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 LINC01545Q5VT33 79 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 OR8G2PQ6IF36 304 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 GFRALQ6UXV0 394 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 OR4F5Q8NH21 305 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 IL1F10Q8WWZ1 152 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 WFIKKN1Q96NZ8 548 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 CLEC7AQ9BXN2 247 aa6.09□□□□□ -1.44
CNOT4-201ENST00000315544 MUC4Q99102 2169 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 H3BRN7 92 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 SOCS3O14543 225 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 ZNF324O75467 553 aaPredicted RBP6.08□□□□□ -1.44
CNOT4-201ENST00000315544 GATA2P23769 480 aaPredicted RBP6.08□□□□□ -1.44
CNOT4-201ENST00000315544 NPY1RP25929 384 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 ZFAND3Q9H8U3 227 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 FZR1Q9UM11 496 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 IGLV11-55A0A075B6I3 123 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 IGHV4-4A0A075B6R2 117 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 GRIFINA4D1Z8 144 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 C17orf100A8MU93 164 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 E7EQL1 145 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 H7BYZ3 331 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 DLEU1O43261 78 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 FCGR3BO75015 233 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 IGHV1-8P0DP01 117 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 H2BFWTQ7Z2G1 175 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 OR2Z1Q8NG97 314 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 RPUSD4Q96CM3 377 aaKnown RBP6.08□□□□□ -1.44
CNOT4-201ENST00000315544 HHLA3Q9XRX5 114 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 NIPBLQ6KC79 2804 aaeCLIP6.08□□□□□ -1.44
CNOT4-201ENST00000315544 PLXNB1O43157 2135 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 IGHV1-24A0A0C4DH33 117 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 PRH1P02810 166 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 LINC00614P0C842 121 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 DPF1Q92782 380 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 APC2O95996 2303 aa6.08□□□□□ -1.44
CNOT4-201ENST00000315544 C16orf97H3BN30 126 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 GRPP07492 148 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 VAMP2P63027 116 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 ADAMTSL5Q6ZMM2 481 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 OR1B1Q8NGR6 318 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 KNTC1P50748 2209 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 RD3LP0DJH9 198 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 PQLC2Q6ZP29 291 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 TMEM75Q8N9X5 138 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 ADTRPQ96IZ2 230 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 PRO1933Q9H354 126 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 PRNDQ9UKY0 176 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 TPRP12270 2363 aaKnown RBP6.07□□□□□ -1.44
CNOT4-201ENST00000315544 CCL25O15444 150 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 OR7C2O60412 319 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 GUCA1AP43080 201 aaPredicted RBP6.07□□□□□ -1.44
CNOT4-201ENST00000315544 TEX45Q8NA69 505 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 LINC01600Q96MT4 127 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 SSBP4Q9BWG4 385 aaPredicted RBP6.07□□□□□ -1.44
CNOT4-201ENST00000315544 WNT10AQ9GZT5 417 aa6.07□□□□□ -1.44
CNOT4-201ENST00000315544 A0A087X0K7 114 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms