RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 TOMM40O96008 361 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 IGHV3-23P01764 117 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 CD99P14209 185 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 SRD5A1P18405 259 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 ORM2P19652 201 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 TAS2R45P59539 299 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 PLP1P60201 277 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 OR51G1Q8NGK1 321 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 USMG5Q96IX5 58 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 ATP6V0BQ99437 205 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 SMDT1Q9H4I9 107 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 TECRQ9NZ01 308 aaKnown RBP13.66□□□□□ -0.22
KRT28-201ENST00000306658 DOK5Q9P104 306 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 ANKRD34BA5PLL1 514 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 OR2T8A6NH00 312 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 NUPL2O15504 423 aaKnown RBP13.66□□□□□ -0.22
KRT28-201ENST00000306658 IGLV1-40P01703 118 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 PSMB3P49720 205 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 PPT1P50897 306 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 TPPP2P59282 170 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 CFHR3Q02985 330 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 HAGHQ16775 308 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 SPATA31B1PQ5VZV4 182 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 IQCF2Q8IXL9 164 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 OR1B1Q8NGR6 318 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 Q8WTZ3 238 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 SCRT1Q9BWW7 348 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 TMEM231Q9H6L2 316 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 ZNF702PQ9H963 129 aa13.66□□□□□ -0.22
KRT28-201ENST00000306658 DNAJC9-AS1A6NH13 148 aa13.65□□□□□ -0.22
KRT28-201ENST00000306658 CLEC3BP05452 202 aa13.65□□□□□ -0.22
KRT28-201ENST00000306658 CTSGP08311 255 aa13.65□□□□□ -0.22
KRT28-201ENST00000306658 ARL14EPLP0DKL9 152 aa13.65□□□□□ -0.22
KRT28-201ENST00000306658 PF4V1P10720 104 aa13.65□□□□□ -0.22
KRT28-201ENST00000306658 PATE2Q6UY27 113 aa13.65□□□□□ -0.22
KRT28-201ENST00000306658 MIR17HGQ75NE6 70 aa13.65□□□□□ -0.22
KRT28-201ENST00000306658 C8orf88P0DMB2 117 aa13.64□□□□□ -0.23
KRT28-201ENST00000306658 TAGLN2P37802 199 aaKnown RBP13.64□□□□□ -0.23
KRT28-201ENST00000306658 LYZP61626 148 aa13.64□□□□□ -0.23
KRT28-201ENST00000306658 TMEM95Q3KNT9 176 aa13.64□□□□□ -0.23
KRT28-201ENST00000306658 KHDC3LQ587J8 217 aa13.64□□□□□ -0.23
KRT28-201ENST00000306658 RARRES2Q99969 163 aa13.64□□□□□ -0.23
KRT28-201ENST00000306658 TMPRSS5Q9H3S3 457 aa13.64□□□□□ -0.23
KRT28-201ENST00000306658 A0A0G2JLM5 398 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 TMEM218A2RU14 115 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 TMEM89A2RUT3 159 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 CLDN34H7C241 214 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 IGHG4P01861 327 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 BCL2P10415 239 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 GPR183P32249 361 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 SLC35B1P78383 322 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 ZNF506Q5JVG8 444 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 PQLC2Q6ZP29 291 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 LINC00305Q7Z4B0 112 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 Q8N2B8 174 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 ZNF418Q8TF45 676 aaPredicted RBP13.63□□□□□ -0.23
KRT28-201ENST00000306658 MANBALQ9NQG1 85 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 MTORP42345 2549 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 ZP3P21754 424 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 RAB9AP51151 201 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 CLEC19AQ6UXS0 136 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 S100A7AQ86SG5 101 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 CCDC140Q96MF4 163 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 HIGD1AQ9Y241 93 aa13.63□□□□□ -0.23
KRT28-201ENST00000306658 LOC102723971A0A1B0GUV8 181 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 OR2C1O95371 312 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 IL4P05112 153 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 GCHFRP30047 84 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 ZNF329Q86UD4 541 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 ZNF491Q8N8L2 437 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 RNF125Q96EQ8 232 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 LINC00052Q96N35 136 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 UHRF2Q96PU4 802 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 CHRDL1Q9BU40 450 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 KLK15Q9H2R5 256 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 VAX2Q9UIW0 290 aa13.62□□□□□ -0.23
KRT28-201ENST00000306658 WI2-2373I1.2A0A1W2PRP0 233 aa13.61□□□□□ -0.23
KRT28-201ENST00000306658 FAM181BA6NEQ2 426 aa13.61□□□□□ -0.23
KRT28-201ENST00000306658 OR7C2O60412 319 aa13.61□□□□□ -0.23
KRT28-201ENST00000306658 HSPB1P04792 205 aaKnown RBP13.61□□□□□ -0.23
KRT28-201ENST00000306658 ADMP35318 185 aa13.61□□□□□ -0.23
KRT28-201ENST00000306658 ICAM4Q14773 271 aa13.61□□□□□ -0.23
KRT28-201ENST00000306658 TMEM167BQ9NRX6 74 aa13.61□□□□□ -0.23
KRT28-201ENST00000306658 MRPL27Q9P0M9 148 aaKnown RBP13.61□□□□□ -0.23
KRT28-201ENST00000306658 TGOLN2O43493 480 aa13.6□□□□□ -0.23
KRT28-201ENST00000306658 PSMB8P28062 276 aa13.6□□□□□ -0.23
KRT28-201ENST00000306658 RPL15P61313 204 aaKnown RBP13.6□□□□□ -0.23
KRT28-201ENST00000306658 TEX38Q6PEX7 206 aa13.6□□□□□ -0.23
KRT28-201ENST00000306658 ZNF600Q6ZNG1 722 aa13.6□□□□□ -0.23
KRT28-201ENST00000306658 STXBP6Q8NFX7 210 aa13.6□□□□□ -0.23
KRT28-201ENST00000306658 OR5AU1Q8NGC0 362 aa13.6□□□□□ -0.23
KRT28-201ENST00000306658 RXFP4Q8TDU9 374 aa13.6□□□□□ -0.23
KRT28-201ENST00000306658 SLC35B3Q9H1N7 401 aa13.6□□□□□ -0.23
KRT28-201ENST00000306658 ESM1Q9NQ30 184 aa13.6□□□□□ -0.23
KRT28-201ENST00000306658 C9JQL5 133 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 SFTA3P0C7M3 94 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 RELQ04864 619 aaPredicted RBP13.59□□□□□ -0.23
KRT28-201ENST00000306658 MORN5Q5VZ52 161 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 FAM167A-AS1Q96KT0 104 aa13.59□□□□□ -0.23
KRT28-201ENST00000306658 SLC25A2Q9BXI2 301 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms