RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 FREM1Q5H8C1 2179 aa12.57□□□□□ -0.4
DDB1-201ENST00000301764 RPS20P60866 119 aaKnown RBP12.56□□□□□ -0.4
DDB1-201ENST00000301764 LSM4Q9Y4Z0 139 aaKnown RBP12.56□□□□□ -0.4
DDB1-201ENST00000301764 TRAV8-1A0A0A6YYK1 113 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 KLK10O43240 276 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 GLRXP35754 106 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 RASL11AQ6T310 242 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 ZNF788Q6ZQV5 615 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 DPF1Q92782 380 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 SIGMAR1Q99720 223 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 MRPL16Q9NX20 251 aaKnown RBP12.56□□□□□ -0.4
DDB1-201ENST00000301764 IGHV3OR16-13A0A075B7E8 117 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 IGHV3OR16-8A0A075B7F1 116 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 IGHV3-74A0A0B4J1X5 117 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 HBDP02042 147 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 HSD52Q0P140 79 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 OR5A1Q8NGJ0 315 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 NEUROG1Q92886 237 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 GTSF1LQ9H1H1 148 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 CD5LO43866 347 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 CD24P25063 80 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 CIARTQ8N365 385 aaPredicted RBP12.56□□□□□ -0.4
DDB1-201ENST00000301764 IFI27L1Q96BM0 104 aa12.56□□□□□ -0.4
DDB1-201ENST00000301764 YLPM1P49750 1951 aaKnown RBP12.55□□□□□ -0.4
DDB1-201ENST00000301764 SAMD5Q5TGI4 173 aa12.55□□□□□ -0.4
DDB1-201ENST00000301764 DEFB124Q8NES8 71 aa12.55□□□□□ -0.4
DDB1-201ENST00000301764 GP6Q9HCN6 339 aa12.55□□□□□ -0.4
DDB1-201ENST00000301764 FOXA2Q9Y261 457 aaPredicted RBP12.55□□□□□ -0.4
DDB1-201ENST00000301764 AHRRA9YTQ3 701 aa12.55□□□□□ -0.4
DDB1-201ENST00000301764 MLNRO43193 412 aa12.55□□□□□ -0.4
DDB1-201ENST00000301764 NPPCP23582 126 aa12.55□□□□□ -0.4
DDB1-201ENST00000301764 PDLIM4P50479 330 aa12.55□□□□□ -0.4
DDB1-201ENST00000301764 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.55□□□□□ -0.4
DDB1-201ENST00000301764 CCL25O15444 150 aa12.55□□□□□ -0.4
DDB1-201ENST00000301764 PSG9Q00887 426 aa12.55□□□□□ -0.4
DDB1-201ENST00000301764 PRB3Q04118 309 aaPredicted RBP12.55□□□□□ -0.4
DDB1-201ENST00000301764 TRIP6Q15654 476 aaKnown RBP12.55□□□□□ -0.4
DDB1-201ENST00000301764 CD177Q8N6Q3 437 aa12.55□□□□□ -0.4
DDB1-201ENST00000301764 CEACAM8P31997 349 aaPredicted RBP12.54□□□□□ -0.4
DDB1-201ENST00000301764 MFAP4P55083 255 aa12.54□□□□□ -0.4
DDB1-201ENST00000301764 TIMM23BQ5SRD1 257 aa12.54□□□□□ -0.4
DDB1-201ENST00000301764 KIR3DL3Q8N743 410 aa12.54□□□□□ -0.4
DDB1-201ENST00000301764 PCNTO95613 3336 aa12.54□□□□□ -0.4
DDB1-201ENST00000301764 TMEM30BQ3MIR4 351 aa12.54□□□□□ -0.4
DDB1-201ENST00000301764 Q6AWC8 147 aa12.54□□□□□ -0.4
DDB1-201ENST00000301764 RNASE8Q8TDE3 154 aaKnown RBP12.54□□□□□ -0.4
DDB1-201ENST00000301764 OR5AN1Q8NGI8 311 aa12.54□□□□□ -0.4
DDB1-201ENST00000301764 C1orf185Q5T7R7 199 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 FER1L6-AS1Q8NA97 138 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 OTORQ9NRC9 128 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 PCNX3Q9H6A9 2034 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 GTF3C1Q12789 2109 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 APOMO95445 188 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 TGFAP01135 160 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 EXOC3-AS1Q8N2X6 119 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 CENPFP49454 3210 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 A0A1B0GW15 77 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 FAM90A27PA6NNH2 459 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 CD3EP07766 207 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 LEPP41159 167 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 KIR3DS1Q14943 382 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 PSG8Q9UQ74 426 aa12.53□□□□□ -0.4
DDB1-201ENST00000301764 SRRM5B3KS81 715 aa12.52□□□□□ -0.4
DDB1-201ENST00000301764 GGTLC3B5MD39 225 aa12.52□□□□□ -0.4
DDB1-201ENST00000301764 LOXL3P58215 753 aa12.52□□□□□ -0.4
DDB1-201ENST00000301764 FAM169BQ8N8A8 192 aa12.52□□□□□ -0.4
DDB1-201ENST00000301764 SPACA3Q8IXA5 215 aa12.52□□□□□ -0.41
DDB1-201ENST00000301764 BCL6BQ8N143 479 aaPredicted RBP12.52□□□□□ -0.41
DDB1-201ENST00000301764 ZCCHC24Q8N2G6 241 aaKnown RBP12.52□□□□□ -0.41
DDB1-201ENST00000301764 TICRRQ7Z2Z1 1910 aa12.52□□□□□ -0.41
DDB1-201ENST00000301764 K7EN84 100 aa12.52□□□□□ -0.41
DDB1-201ENST00000301764 TM4SF5O14894 197 aa12.52□□□□□ -0.41
DDB1-201ENST00000301764 NDUFA3O95167 84 aa12.52□□□□□ -0.41
DDB1-201ENST00000301764 FAM231BA6NCW3 169 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 PRSS2P07478 247 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 DTX1Q86Y01 620 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 ZNF71Q9NQZ8 489 aaPredicted RBP12.51□□□□□ -0.41
DDB1-201ENST00000301764 C1RLQ9NZP8 487 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 LMO1P25800 156 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 ZFP36L1Q07352 338 aaKnown RBP12.51□□□□□ -0.41
DDB1-201ENST00000301764 ZNF479Q96JC4 524 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.51□□□□□ -0.412e-7■■■□□ 18.1
DDB1-201ENST00000301764 D6R8Y8 96 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 ATP5LO75964 103 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 NCR2O95944 276 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 IGHV3-23P01764 117 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 TCRAP04437 139 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 PPIFP30405 207 aaKnown RBP12.51□□□□□ -0.41
DDB1-201ENST00000301764 PLA2G5P39877 138 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 FAM90A1Q86YD7 464 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 OR9G4Q8NGQ1 327 aa12.51□□□□□ -0.41
DDB1-201ENST00000301764 IGHV2-26A0A0B4J1V2 119 aa12.5□□□□□ -0.41
DDB1-201ENST00000301764 Q0VFX4 171 aa12.5□□□□□ -0.41
DDB1-201ENST00000301764 C9orf106Q8NAJ2 232 aa12.5□□□□□ -0.41
DDB1-201ENST00000301764 SLC25A48Q6ZT89 311 aaKnown RBP12.5□□□□□ -0.41
DDB1-201ENST00000301764 PRR7Q8TB68 274 aa12.5□□□□□ -0.41
DDB1-201ENST00000301764 LINC00312Q9Y6C7 94 aa12.5□□□□□ -0.41
DDB1-201ENST00000301764 IGHV3-49A0A0A0MS15 119 aa12.5□□□□□ -0.41
DDB1-201ENST00000301764 RABAC1Q9UI14 185 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms