RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CR1P17927 2039 aa16.88■□□□□ 0.29
SOX17-201ENST00000297316 TRGC1P0CF51 173 aa16.88■□□□□ 0.29
SOX17-201ENST00000297316 FAM167A-AS1Q96KT0 104 aa16.88■□□□□ 0.29
SOX17-201ENST00000297316 B4DSR2 109 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 OR7C2O60412 319 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 OR10J4P0C629 311 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 FAM106CPP0CH98 169 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 CX3CL1P78423 397 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 PDZD11Q5EBL8 140 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 SLC25A2Q9BXI2 301 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 WNT10AQ9GZT5 417 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 DNAJC4Q9NNZ3 241 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 TNFRSF19Q9NS68 423 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 AURKAIP1Q9NWT8 199 aaPredicted RBP16.87■□□□□ 0.29
SOX17-201ENST00000297316 A0A0U1RQK1 487 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 PGPEP1LA6NFU8 196 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 F6UZH7 168 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 PPP1R2P9O14990 202 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 RD3LP0DJH9 198 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 DEFB113Q30KQ7 82 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 ETFRF1Q6IPR1 90 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 CDPF1Q6NVV7 123 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 TMEM116Q8NCL8 245 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 OR4X1Q8NH49 305 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 GPR61Q9BZJ8 451 aa16.87■□□□□ 0.29
SOX17-201ENST00000297316 ZNF469Q96JG9 3925 aaPredicted RBP16.87■□□□□ 0.29
SOX17-201ENST00000297316 TRBV20OR9-2A0A075B6H5 130 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 RNF223E7ERA6 249 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 HIST3H2BBQ8N257 126 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 Q8N9W7 124 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 OR10D4PQ8NGN7 298 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 C19orf24Q9BVV8 132 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 SH2D7A6NKC9 451 aaPredicted RBP16.86■□□□□ 0.29
SOX17-201ENST00000297316 I3L2K1 104 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 C8orf88P0DMB2 117 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 BRS3P32247 399 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 KLF17Q5JT82 389 aaPredicted RBP16.86■□□□□ 0.29
SOX17-201ENST00000297316 C16orf82Q7Z2V1 217 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 OR5T1Q8NG75 326 aa16.86■□□□□ 0.29
SOX17-201ENST00000297316 COX7A2P2O60397 106 aa16.85■□□□□ 0.29
SOX17-201ENST00000297316 PSMG3-AS1Q96PY0 264 aa16.85■□□□□ 0.29
SOX17-201ENST00000297316 TRBV24-1A0A075B6N3 115 aa16.85■□□□□ 0.29
SOX17-201ENST00000297316 CORTO00230 105 aa16.85■□□□□ 0.29
SOX17-201ENST00000297316 ASPHD1Q5U4P2 390 aa16.85■□□□□ 0.29
SOX17-201ENST00000297316 PQLC2Q6ZP29 291 aa16.85■□□□□ 0.29
SOX17-201ENST00000297316 TMEM219Q86XT9 240 aa16.85■□□□□ 0.29
SOX17-201ENST00000297316 TXNDC17Q9BRA2 123 aa16.85■□□□□ 0.29
SOX17-201ENST00000297316 MRPL32Q9BYC8 188 aaKnown RBP16.85■□□□□ 0.29
SOX17-201ENST00000297316 CTDSP1Q9GZU7 261 aa16.85■□□□□ 0.29
SOX17-201ENST00000297316 ZNF355PQ9NSJ1 428 aa16.85■□□□□ 0.29
SOX17-201ENST00000297316 ELOA3CA0A087WX78 387 aaPredicted RBP16.84■□□□□ 0.29
SOX17-201ENST00000297316 C10orf113Q5VZT2 155 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 ZNF562Q6V9R5 426 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 LINC01551Q86U37 167 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 TRGV9Q99603 122 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 PHOX2AO14813 284 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 TAS2R45P59539 299 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 SELENOTP62341 195 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 Q5PR19 223 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 OR5AU1Q8NGC0 362 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 ARPC1AQ92747 370 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 HSPB9Q9BQS6 159 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 SRSF8Q9BRL6 282 aaKnown RBP16.84■□□□□ 0.29
SOX17-201ENST00000297316 TMEM167BQ9NRX6 74 aa16.84■□□□□ 0.29
SOX17-201ENST00000297316 TGOLN2O43493 480 aa16.83■□□□□ 0.28
SOX17-201ENST00000297316 PYYP10082 97 aa16.83■□□□□ 0.28
SOX17-201ENST00000297316 PRRC2AP48634 2157 aaKnown RBP16.83■□□□□ 0.28
SOX17-201ENST00000297316 IGHV7-81A0A0B4J1V7 117 aa16.82■□□□□ 0.28
SOX17-201ENST00000297316 PIFOQ8TCI5 191 aa16.82■□□□□ 0.28
SOX17-201ENST00000297316 BEX4Q9NWD9 120 aaPredicted RBP16.82■□□□□ 0.28
SOX17-201ENST00000297316 GGTLC3B5MD39 225 aa16.82■□□□□ 0.28
SOX17-201ENST00000297316 K7EIM0 57 aa16.82■□□□□ 0.28
SOX17-201ENST00000297316 ORM2P19652 201 aa16.82■□□□□ 0.28
SOX17-201ENST00000297316 NECAP1Q8NC96 275 aa16.82■□□□□ 0.28
SOX17-201ENST00000297316 OR1L4Q8NGR5 311 aa16.82■□□□□ 0.28
SOX17-201ENST00000297316 C11orf52Q96A22 123 aa16.82■□□□□ 0.28
SOX17-201ENST00000297316 PFDN5Q99471 154 aa16.82■□□□□ 0.28
SOX17-201ENST00000297316 GCN1Q92616 2671 aaKnown RBP16.81■□□□□ 0.28
SOX17-201ENST00000297316 EGR2P11161 476 aaPredicted RBP16.81■□□□□ 0.28
SOX17-201ENST00000297316 LINC01356Q8N9X3 169 aa16.81■□□□□ 0.28
SOX17-201ENST00000297316 C22orf15Q8WYQ4 148 aa16.81■□□□□ 0.28
SOX17-201ENST00000297316 ELOVL1Q9BW60 279 aa16.81■□□□□ 0.28
SOX17-201ENST00000297316 SNRPCP09234 159 aaKnown RBP16.81■□□□□ 0.28
SOX17-201ENST00000297316 IGLC1P0CG04 106 aa16.81■□□□□ 0.28
SOX17-201ENST00000297316 LINC00305Q7Z4B0 112 aa16.81■□□□□ 0.28
SOX17-201ENST00000297316 OR1B1Q8NGR6 318 aa16.81■□□□□ 0.28
SOX17-201ENST00000297316 RNF2Q99496 336 aa16.81■□□□□ 0.28
SOX17-201ENST00000297316 TGFAP01135 160 aa16.8■□□□□ 0.28
SOX17-201ENST00000297316 FABP4P15090 132 aa16.8■□□□□ 0.28
SOX17-201ENST00000297316 BPIFB3P59826 476 aa16.8■□□□□ 0.28
SOX17-201ENST00000297316 UBE2L3P68036 154 aaKnown RBP16.8■□□□□ 0.28
SOX17-201ENST00000297316 C9orf152Q5JTZ5 239 aa16.8■□□□□ 0.28
SOX17-201ENST00000297316 S4R3C0 116 aa16.8■□□□□ 0.28
SOX17-201ENST00000297316 TEX15Q9BXT5 2789 aa16.8■□□□□ 0.28
SOX17-201ENST00000297316 LINC01548A6NM66 108 aa16.8■□□□□ 0.28
SOX17-201ENST00000297316 HNF1AP20823 631 aa16.8■□□□□ 0.28
SOX17-201ENST00000297316 C1RLQ9NZP8 487 aa16.8■□□□□ 0.28
SOX17-201ENST00000297316 ARL2-SNX15V9GYD0 113 aa16.8■□□□□ 0.28
SOX17-201ENST00000297316 CRYBB3P26998 211 aa16.79■□□□□ 0.28
SOX17-201ENST00000297316 KRTAP1-3Q8IUG1 177 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms