RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 ZNF585BQ52M93 769 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 NABP1Q96AH0 204 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 GGTLC1Q9BX51 225 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 PINLYPA6NC86 204 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 NPFFO15130 113 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 TMPRSS3P57727 454 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 TMEM249Q2WGJ8 235 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 MRPS18CQ9Y3D5 142 aaKnown RBP13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 PRCDQ00LT1 54 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 NMSQ5H8A3 153 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 COPS9Q8WXC6 57 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 COQ2Q96H96 371 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 NOTCH3Q9UM47 2321 aa13.64□□□□□ -0.23
SH3RF1-201ENST00000284637 KIR3DS1Q14943 382 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 CRIPAKQ8N1N5 446 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 VKORC1Q9BQB6 163 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 TNFRSF18Q9Y5U5 241 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 LY96Q9Y6Y9 160 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 FABP5P3A8MUU1 101 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 HOXA3O43365 443 aaPredicted RBP13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 CFHR1Q03591 330 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 ZNF581Q9P0T4 197 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 ACACAQ13085 2346 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 IGKV1-5P01602 117 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 KIR3DL3Q8N743 410 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 PIMREGQ9BSJ6 248 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 PSG8Q9UQ74 426 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 SYS1-DBNDD2H3BUS1 97 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 VOPP1Q96AW1 172 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 FOXF2Q12947 444 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 RNF125Q96EQ8 232 aa13.63□□□□□ -0.23
SH3RF1-201ENST00000284637 RNASE4P34096 147 aaKnown RBP13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 GUSBP1Q15486 140 aa13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 BCL6BQ8N143 479 aaPredicted RBP13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 PSME4Q14997 1843 aa13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 SEPSECSQ9HD40 501 aaKnown RBP13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 MMP23AO75900 390 aa13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 BMPERQ8N8U9 685 aa13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 FER1L5A0AVI2 2057 aa13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 HAX1O00165 279 aa13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 SPINK8P0C7L1 97 aa13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 C10orf55Q5SWW7 151 aa13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 IFI27L1Q96BM0 104 aa13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 JMJD8Q96S16 334 aa13.62□□□□□ -0.23
SH3RF1-201ENST00000284637 FOXH1O75593 365 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 IGHV3-11P01762 117 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 CENPVQ7Z7K6 275 aaPredicted RBP13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 PSPNO60542 156 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 DPM2O94777 84 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 LRRK1Q38SD2 2015 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 DOCK6Q96HP0 2047 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 LILRA1O75019 489 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 LOC285556D6RIA3 1793 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 PKDREJQ9NTG1 2253 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 EVI2AP22794 236 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 CFPP27918 469 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 GLMPQ8WWB7 406 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 CREBBPQ92793 2442 aa13.61□□□□□ -0.23
SH3RF1-201ENST00000284637 A0A1B0GUS0 222 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 PDLIM4P50479 330 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 Q6ZWC4 215 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 STPG4Q8N801 248 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 SLC25A2Q9BXI2 301 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 CACNA1HO95180 2353 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 OR5AN1Q8NGI8 311 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 H7C1H1 209 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 QRFPP83859 136 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 SPANXA1Q9NS26 97 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 RALGAPA2Q2PPJ7 1873 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 NBR2O15453 112 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 ADAMTSL5Q6ZMM2 481 aa13.6□□□□□ -0.23
SH3RF1-201ENST00000284637 TMEM238C9JI98 176 aa13.59□□□□□ -0.23
SH3RF1-201ENST00000284637 K7EP13 123 aa13.59□□□□□ -0.23
SH3RF1-201ENST00000284637 PHF3Q92576 2039 aaKnown RBP13.59□□□□□ -0.23
SH3RF1-201ENST00000284637 FAM231BA6NCW3 169 aa13.59□□□□□ -0.23
SH3RF1-201ENST00000284637 TEX43Q6ZNM6 134 aa13.59□□□□□ -0.23
SH3RF1-201ENST00000284637 ZNF48Q96MX3 618 aaPredicted RBP13.59□□□□□ -0.23
SH3RF1-201ENST00000284637 PNRC2Q9NPJ4 139 aaKnown RBP13.59□□□□□ -0.23
SH3RF1-201ENST00000284637 PSG3Q16557 428 aa13.59□□□□□ -0.23
SH3RF1-201ENST00000284637 ATP6V0BQ99437 205 aa13.59□□□□□ -0.23
SH3RF1-201ENST00000284637 KIR2DL5BA0A0G2JN68 375 aa13.58□□□□□ -0.23
SH3RF1-201ENST00000284637 KIR2DL5BA0A0G2JPC4 375 aa13.58□□□□□ -0.23
SH3RF1-201ENST00000284637 TMEM14EPQ6UXP3 125 aa13.58□□□□□ -0.23
SH3RF1-201ENST00000284637 KIR2DL5AQ8N109 375 aa13.58□□□□□ -0.23
SH3RF1-201ENST00000284637 TMEM133Q9H2Q1 129 aa13.58□□□□□ -0.23
SH3RF1-201ENST00000284637 A0A0G2JMZ2 1700 aa13.58□□□□□ -0.24
SH3RF1-201ENST00000284637 LRRC37A2A6NM11 1700 aa13.58□□□□□ -0.24
SH3RF1-201ENST00000284637 LYNX1G3V0Z9 82 aa13.58□□□□□ -0.24
SH3RF1-201ENST00000284637 LYNX1P0DP58 116 aa13.58□□□□□ -0.24
SH3RF1-201ENST00000284637 TRAV3A0A0B4J244 114 aa13.58□□□□□ -0.24
SH3RF1-201ENST00000284637 MGST2Q99735 147 aa13.58□□□□□ -0.24
SH3RF1-201ENST00000284637 ASCL2Q99929 193 aa13.58□□□□□ -0.24
SH3RF1-201ENST00000284637 PVRIGQ6DKI7 326 aa13.57□□□□□ -0.24
SH3RF1-201ENST00000284637 GGNQ86UU5 652 aa13.57□□□□□ -0.24
SH3RF1-201ENST00000284637 TOMM7Q9P0U1 55 aa13.57□□□□□ -0.24
SH3RF1-201ENST00000284637 IGHV1-18A0A0C4DH31 117 aa13.57□□□□□ -0.24
SH3RF1-201ENST00000284637 NPIPB5A8MRT5 1133 aa13.57□□□□□ -0.24
SH3RF1-201ENST00000284637 SRSF7Q16629 238 aaKnown RBP eCLIP13.57□□□□□ -0.24
SH3RF1-201ENST00000284637 FAM90A9PA6NNJ1 464 aa13.57□□□□□ -0.24
SH3RF1-201ENST00000284637 IGKCP01834 107 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms