RNA–Protein interactions for RNA: ENST00000262643.7

CCNE1-201, Transcript of cyclin E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNE1, Length 2,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-201ENST00000262643 GPR61Q9BZJ8 451 aa16.41■□□□□ 0.22
CCNE1-201ENST00000262643 TMEM231Q9H6L2 316 aa16.41■□□□□ 0.22
CCNE1-201ENST00000262643 AURKAIP1Q9NWT8 199 aaPredicted RBP16.41■□□□□ 0.22
CCNE1-201ENST00000262643 H3BUA1 57 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 MPDU1O75352 247 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 EIF3GO75821 320 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCNE1-201ENST00000262643 TMEM41BQ5BJD5 291 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 RNASEH2CQ8TDP1 164 aaKnown RBP16.4■□□□□ 0.22
CCNE1-201ENST00000262643 SFT2D1Q8WV19 159 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 IGHV4OR15-8A0A075B7B6 117 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 A0A087WW49 117 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 OPRK1P41145 380 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 KRTAP10-11P60412 298 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 CCL20P78556 96 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 ZNF726P1Q15940 193 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 SPSB3Q6PJ21 355 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 REC114Q7Z4M0 266 aa16.4■□□□□ 0.22
CCNE1-201ENST00000262643 RPP25LQ8N5L8 163 aaKnown RBP16.4■□□□□ 0.22
CCNE1-201ENST00000262643 FNDC10F2Z333 226 aa16.39■□□□□ 0.21
CCNE1-201ENST00000262643 GPX4P36969 197 aaPredicted RBP16.39■□□□□ 0.21
CCNE1-201ENST00000262643 SLURP1P55000 103 aa16.39■□□□□ 0.21
CCNE1-201ENST00000262643 SSX7Q7RTT5 188 aa16.39■□□□□ 0.21
CCNE1-201ENST00000262643 SLC16A13Q7RTY0 426 aa16.39■□□□□ 0.21
CCNE1-201ENST00000262643 TMEM144Q7Z5S9 345 aa16.39■□□□□ 0.21
CCNE1-201ENST00000262643 ZNF114Q8NC26 417 aa16.39■□□□□ 0.21
CCNE1-201ENST00000262643 MISP3Q96FF7 219 aa16.39■□□□□ 0.21
CCNE1-201ENST00000262643 GGTLC1Q9BX51 225 aa16.39■□□□□ 0.21
CCNE1-201ENST00000262643 TREM1Q9NP99 234 aa16.39■□□□□ 0.21
CCNE1-201ENST00000262643 IGKV1OR2-108A0A075B7D4 117 aa16.38■□□□□ 0.21
CCNE1-201ENST00000262643 LINC01619G3V211 115 aa16.38■□□□□ 0.21
CCNE1-201ENST00000262643 MIC13Q5XKP0 118 aa16.38■□□□□ 0.21
CCNE1-201ENST00000262643 PVRIGQ6DKI7 326 aa16.38■□□□□ 0.21
CCNE1-201ENST00000262643 OR1P1Q8NH06 330 aa16.38■□□□□ 0.21
CCNE1-201ENST00000262643 CACNG8Q8WXS5 425 aa16.38■□□□□ 0.21
CCNE1-201ENST00000262643 DMRT1Q9Y5R6 373 aa16.38■□□□□ 0.21
CCNE1-201ENST00000262643 F11RQ9Y624 299 aaKnown RBP16.38■□□□□ 0.21
CCNE1-201ENST00000262643 A0A0G2JLM5 398 aa16.38■□□□□ 0.21
CCNE1-201ENST00000262643 SEC14L6B5MCN3 397 aa16.38■□□□□ 0.21
CCNE1-201ENST00000262643 ACY3Q96HD9 319 aa16.38■□□□□ 0.21
CCNE1-201ENST00000262643 GCSAMLQ5JQS6 135 aa16.37■□□□□ 0.21
CCNE1-201ENST00000262643 OR10G4Q8NGN3 311 aa16.37■□□□□ 0.21
CCNE1-201ENST00000262643 OR10G9Q8NGN4 311 aa16.37■□□□□ 0.21
CCNE1-201ENST00000262643 OR10G7Q8NGN6 311 aa16.37■□□□□ 0.21
CCNE1-201ENST00000262643 SRSF8Q9BRL6 282 aaKnown RBP16.37■□□□□ 0.21
CCNE1-201ENST00000262643 MRPL36Q9P0J6 103 aaKnown RBP16.37■□□□□ 0.21
CCNE1-201ENST00000262643 PXMP4Q9Y6I8 212 aa16.37■□□□□ 0.21
CCNE1-201ENST00000262643 IGHV3-21A0A0B4J1V1 117 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 HSPB1P04792 205 aaKnown RBP16.36■□□□□ 0.21
CCNE1-201ENST00000262643 DEFA4P12838 97 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 EGFEM1PQ0D2K5 195 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 LCN15Q6UWW0 184 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 MRAPQ8TCY5 172 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 DLX4Q92988 240 aaPredicted RBP16.36■□□□□ 0.21
CCNE1-201ENST00000262643 SLC35E1Q96K37 410 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 CTRB1P17538 263 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 C9orf66Q5T8R8 295 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 CTRB2Q6GPI1 263 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 TTC9CQ8N5M4 171 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 NPIPB3Q92617 1050 aa16.36■□□□□ 0.21
CCNE1-201ENST00000262643 TMEM218A2RU14 115 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 YIF1AO95070 293 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 BRI3O95415 125 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 MBP02144 154 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 GUK1Q16774 197 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 OVOL1O14753 267 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 HMGB3O15347 200 aaKnown RBP16.35■□□□□ 0.21
CCNE1-201ENST00000262643 CD5P06127 495 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 M6PRP20645 277 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 FGF8P55075 233 aaPredicted RBP16.35■□□□□ 0.21
CCNE1-201ENST00000262643 RHOGP84095 191 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 RAB31Q13636 194 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 FAM122CQ6P4D5 195 aa16.35■□□□□ 0.21
CCNE1-201ENST00000262643 HBE1P02100 147 aa16.34■□□□□ 0.21
CCNE1-201ENST00000262643 GATA2P23769 480 aaPredicted RBP16.34■□□□□ 0.21
CCNE1-201ENST00000262643 OR10J1P30954 320 aa16.34■□□□□ 0.21
CCNE1-201ENST00000262643 ACOT6Q3I5F7 207 aaPredicted RBP16.34■□□□□ 0.21
CCNE1-201ENST00000262643 CCDC28AQ8IWP9 274 aa16.34■□□□□ 0.21
CCNE1-201ENST00000262643 MBD3L1Q8WWY6 194 aa16.34■□□□□ 0.21
CCNE1-201ENST00000262643 USMG5Q96IX5 58 aa16.34■□□□□ 0.21
CCNE1-201ENST00000262643 SCRT1Q9BWW7 348 aa16.34■□□□□ 0.21
CCNE1-201ENST00000262643 EIF5A2Q9GZV4 153 aaKnown RBP16.34■□□□□ 0.21
CCNE1-201ENST00000262643 SLC25A22Q9H936 323 aa16.34■□□□□ 0.21
CCNE1-201ENST00000262643 SLC39A9Q9NUM3 307 aa16.34■□□□□ 0.21
CCNE1-201ENST00000262643 SLC45A2Q9UMX9 530 aa16.34■□□□□ 0.21
CCNE1-201ENST00000262643 MT-CO2P00403 227 aa16.33■□□□□ 0.21
CCNE1-201ENST00000262643 B2MP61769 119 aa16.33■□□□□ 0.21
CCNE1-201ENST00000262643 STPG3Q8N7X2 389 aa16.33■□□□□ 0.21
CCNE1-201ENST00000262643 CRYGCP07315 174 aa16.33■□□□□ 0.2
CCNE1-201ENST00000262643 LINC00869P0C866 280 aa16.33■□□□□ 0.2
CCNE1-201ENST00000262643 RPL29P47914 159 aaKnown RBP16.33■□□□□ 0.2
CCNE1-201ENST00000262643 RND2P52198 227 aa16.33■□□□□ 0.2
CCNE1-201ENST00000262643 PBDC1Q9BVG4 233 aa16.33■□□□□ 0.2
CCNE1-201ENST00000262643 TRAV1-1A0A0B4J248 108 aa16.32■□□□□ 0.2
CCNE1-201ENST00000262643 WI2-2373I1.2A0A1W2PRP0 233 aa16.32■□□□□ 0.2
CCNE1-201ENST00000262643 C9JQL5 133 aa16.32■□□□□ 0.2
CCNE1-201ENST00000262643 APOC3P02656 99 aa16.32■□□□□ 0.2
CCNE1-201ENST00000262643 MAP1LC3B2A6NCE7 125 aa16.31■□□□□ 0.2
CCNE1-201ENST00000262643 K7EIL1 84 aa16.31■□□□□ 0.2
CCNE1-201ENST00000262643 CORTO00230 105 aa16.31■□□□□ 0.2
CCNE1-201ENST00000262643 CYB5BO43169 146 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms