RNA–Protein interactions for RNA: ENST00000261439.8

TBC1D1-201, Transcript of TBC1 domain family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TBC1D1, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-201ENST00000261439 FAM57AQ8TBR7 257 aa12.03□□□□□ -0.48
TBC1D1-201ENST00000261439 NABP1Q96AH0 204 aa12.03□□□□□ -0.48
TBC1D1-201ENST00000261439 TRAV21A0A0B4J279 112 aa12.03□□□□□ -0.48
TBC1D1-201ENST00000261439 FAM90A9PA6NNJ1 464 aa12.03□□□□□ -0.48
TBC1D1-201ENST00000261439 IGHV1-18A0A0C4DH31 117 aa12.03□□□□□ -0.48
TBC1D1-201ENST00000261439 BCL6BQ8N143 479 aaPredicted RBP12.03□□□□□ -0.48
TBC1D1-201ENST00000261439 TIMM23O14925 209 aa12.02□□□□□ -0.48
TBC1D1-201ENST00000261439 SMAD7O15105 426 aaKnown RBP12.02□□□□□ -0.48
TBC1D1-201ENST00000261439 PSPNO60542 156 aa12.02□□□□□ -0.48
TBC1D1-201ENST00000261439 SRD5A1P18405 259 aa12.02□□□□□ -0.48
TBC1D1-201ENST00000261439 MCRIP2Q9BUT9 160 aaKnown RBP12.02□□□□□ -0.48
TBC1D1-201ENST00000261439 FREM3P0C091 2139 aa12.02□□□□□ -0.49
TBC1D1-201ENST00000261439 CD28P10747 220 aa12.02□□□□□ -0.49
TBC1D1-201ENST00000261439 NEU4Q8WWR8 484 aaPredicted RBP12.02□□□□□ -0.49
TBC1D1-201ENST00000261439 THSD7AQ9UPZ6 1657 aa12.02□□□□□ -0.49
TBC1D1-201ENST00000261439 A0A1W2PRX2 142 aa12.02□□□□□ -0.49
TBC1D1-201ENST00000261439 SCRT1Q9BWW7 348 aa12.02□□□□□ -0.49
TBC1D1-201ENST00000261439 C7orf69Q9H7B7 122 aa12.02□□□□□ -0.49
TBC1D1-201ENST00000261439 NYNRINQ9P2P1 1898 aaKnown RBP12.02□□□□□ -0.49
TBC1D1-201ENST00000261439 IGLV3-19P01714 112 aa12.02□□□□□ -0.49
TBC1D1-201ENST00000261439 SRSF4Q08170 494 aaKnown RBP12.02□□□□□ -0.49
TBC1D1-201ENST00000261439 LOC102723996A0A087X1L8 192 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 MYOD1P15172 320 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 NPC2P61916 151 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 FAM166AQ6J272 317 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 ABHD17AQ96GS6 310 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 PATJQ8NI35 1801 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 MLNRO43193 412 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 CFAP161Q6P656 301 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 SPRR3Q9UBC9 169 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 HTN3P15516 51 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 ZNF138P52744 262 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 TPTE2P1Q5T6R2 138 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 TMEM42Q69YG0 159 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 TMEM14EPQ6UXP3 125 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 NUP35Q8NFH5 326 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 SLC25A2Q9BXI2 301 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 PRTN3P24158 256 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 SLC25A15Q9Y619 301 aa12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 TP53BP1Q12888 1972 aaPredicted RBP12.01□□□□□ -0.49
TBC1D1-201ENST00000261439 PLNP26678 52 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
TBC1D1-201ENST00000261439 LYZL1Q6UWQ5 148 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 COLCA1Q6ZS62 124 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 OR9G4Q8NGQ1 327 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 LINC00527Q9UJ94 153 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 LINC00205P59089 165 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 SRSF7Q16629 238 aaKnown RBP eCLIP12□□□□□ -0.49
TBC1D1-201ENST00000261439 SLC25A48Q6ZT89 311 aaKnown RBP12□□□□□ -0.49
TBC1D1-201ENST00000261439 LAGE3Q14657 143 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 SCN10AQ9Y5Y9 1956 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 TCRAP04437 139 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 PSG1P11464 419 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 ABCA7Q8IZY2 2146 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 F2Z2F3 143 aa12□□□□□ -0.49
TBC1D1-201ENST00000261439 TMEM167AQ8TBQ9 72 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 NDUFS8O00217 210 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 EREGO14944 169 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 ERG28Q9UKR5 140 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 GVINP1Q7Z2Y8 2422 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 CEP250Q9BV73 2442 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 IGHV1-46P01743 117 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 NTF4P34130 210 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 PNRC2Q9NPJ4 139 aaKnown RBP11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 TAF1LQ8IZX4 1826 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 C9JQL5 133 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 FAM168AQ92567 244 aa11.99□□□□□ -0.49
TBC1D1-201ENST00000261439 SRSF6Q13247 344 aaKnown RBP11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 SLC25A39Q9BZJ4 359 aaPredicted RBP11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 SBF2Q86WG5 1849 aa11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 NRXN2Q9P2S2 1712 aa11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 QRFPP83859 136 aa11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 CFHR1Q03591 330 aa11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 TMEM155Q4W5P6 130 aa11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 A0A0G2JRQ6 117 aa11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 GGNQ86UU5 652 aa11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 YAE1D1Q9NRH1 226 aa11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 LTBP4Q8N2S1 1624 aa11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 RPUSD1Q9UJJ7 312 aaKnown RBP11.98□□□□□ -0.49
TBC1D1-201ENST00000261439 LRRC37AA6NMS7 1700 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 LINC00473A8K010 186 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 FAM90A2PQ658T7 463 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 LILRA1O75019 489 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 UBE2V1Q13404 147 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 MED12Q93074 2177 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 TRAV8-1A0A0A6YYK1 113 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 SYS1-DBNDD2H3BUS1 97 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 MALP21145 153 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 LTBRP36941 435 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 CD177Q8N6Q3 437 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 GREB1Q4ZG55 1949 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 M0R2P5 195 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 GAGE2EQ4V326 116 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 GAGE2DQ9UEU5 116 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 SMPXQ9UHP9 88 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 CACNA1EQ15878 2313 aa11.97□□□□□ -0.49
TBC1D1-201ENST00000261439 Q8TAT8 98 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms