RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 MZT2AQ6P582 158 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 AP3S1Q92572 193 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 RBPMSQ93062 196 aaKnown RBP7.42□□□□□ -1.22
VPS50-201ENST00000251739 TMEM230Q96A57 120 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 NARS2Q96I59 477 aaKnown RBP7.42□□□□□ -1.22
VPS50-201ENST00000251739 RTBDNQ9BSG5 229 aaPredicted RBP7.42□□□□□ -1.22
VPS50-201ENST00000251739 RNF126Q9BV68 326 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 NAA60Q9H7X0 242 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 ENY2Q9NPA8 101 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.42□□□□□ -1.22
VPS50-201ENST00000251739 CACNG5Q9UF02 275 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 TBC1D24Q9ULP9 559 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 CELA1Q9UNI1 258 aa7.42□□□□□ -1.22
VPS50-201ENST00000251739 NACAE9PAV3 2078 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 A0A1B0GVY2 172 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 GABARAPH6UMI1 98 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 BUB3O43684 328 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 SMIM18P0DKX4 95 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 OR10J1P30954 320 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 DHODHQ02127 395 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 DHRS2Q13268 280 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 C12orf74Q32Q52 190 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 NMSQ5H8A3 153 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 PSMG4Q5JS54 123 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 GPR107Q5VW38 600 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 FAAP20Q6NZ36 180 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 STEAP1BQ6NZ63 245 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 SELENOHQ8IZQ5 122 aaKnown RBP7.41□□□□□ -1.22
VPS50-201ENST00000251739 SLC24A4Q8NFF2 622 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 C15orf40Q8WUR7 153 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 SMIM4Q8WVI0 70 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 GPR146Q96CH1 333 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 RAB40CQ96S21 281 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 HEYLQ9NQ87 328 aaPredicted RBP7.41□□□□□ -1.22
VPS50-201ENST00000251739 CLEC5AQ9NY25 188 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 TMEM56-RWDD3S4R434 201 aa7.41□□□□□ -1.22
VPS50-201ENST00000251739 TEX13DA0A0J9YY54 714 aaPredicted RBP7.4□□□□□ -1.22
VPS50-201ENST00000251739 CRYM-AS1A6NIL9 109 aa7.4□□□□□ -1.22
VPS50-201ENST00000251739 H3BMM0 161 aa7.4□□□□□ -1.22
VPS50-201ENST00000251739 TOMM40O96008 361 aa7.4□□□□□ -1.22
VPS50-201ENST00000251739 HLA-DRB4P13762 266 aa7.4□□□□□ -1.22
VPS50-201ENST00000251739 EIF2B2P49770 351 aaKnown RBP7.4□□□□□ -1.22
VPS50-201ENST00000251739 AP2S1P53680 142 aaPredicted RBP7.4□□□□□ -1.22
VPS50-201ENST00000251739 SUMO1P63165 101 aaKnown RBP7.4□□□□□ -1.22
VPS50-201ENST00000251739 MRPS10P82664 201 aaKnown RBP7.4□□□□□ -1.22
VPS50-201ENST00000251739 MEF2DQ14814 521 aa7.4□□□□□ -1.22
VPS50-201ENST00000251739 SCGB2B2Q4G0G5 96 aa7.4□□□□□ -1.22
VPS50-201ENST00000251739 ZNF705AQ6ZN79 300 aaPredicted RBP7.4□□□□□ -1.22
VPS50-201ENST00000251739 RNASE11Q8TAA1 199 aaKnown RBP7.4□□□□□ -1.22
VPS50-201ENST00000251739 Q8WTZ3 238 aa7.4□□□□□ -1.22
VPS50-201ENST00000251739 NRN1Q9NPD7 142 aa7.4□□□□□ -1.22
VPS50-201ENST00000251739 GPR132Q9UNW8 380 aa7.4□□□□□ -1.22
VPS50-201ENST00000251739 HLA-DRB4X5D2U9 266 aa7.4□□□□□ -1.22
VPS50-201ENST00000251739 ABCA13Q86UQ4 5058 aa7.4□□□□□ -1.23
VPS50-201ENST00000251739 ZNF705FA8MVS1 300 aaPredicted RBP7.39□□□□□ -1.23
VPS50-201ENST00000251739 GSTZ1O43708 216 aaPredicted RBP7.39□□□□□ -1.23
VPS50-201ENST00000251739 IL4P05112 153 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 ZNF705DP0CH99 300 aaPredicted RBP7.39□□□□□ -1.23
VPS50-201ENST00000251739 ZNF705BP0CI00 300 aaPredicted RBP7.39□□□□□ -1.23
VPS50-201ENST00000251739 NPY1RP25929 384 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 TMEM268Q5VZI3 342 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 SIGLEC15Q6ZMC9 328 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 LINC00336Q6ZUF6 198 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 OR4C16Q8NGL9 310 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 IL22RA2Q969J5 263 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 NEU1Q99519 415 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 SCRT1Q9BWW7 348 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 C1QTNF4Q9BXJ3 329 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 CDIP1Q9H305 208 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 HSPB7Q9UBY9 170 aa7.39□□□□□ -1.23
VPS50-201ENST00000251739 C14orf166Q9Y224 244 aaKnown RBP7.39□□□□□ -1.23
VPS50-201ENST00000251739 CEBPZOSA8MTT3 80 aa7.38□□□□□ -1.23
VPS50-201ENST00000251739 PSG1P11464 419 aa7.38□□□□□ -1.23
VPS50-201ENST00000251739 SNRPD3P62318 126 aaKnown RBP7.38□□□□□ -1.23
VPS50-201ENST00000251739 ETFRF1Q6IPR1 90 aa7.38□□□□□ -1.23
VPS50-201ENST00000251739 NPIPB3Q92617 1050 aa7.38□□□□□ -1.23
VPS50-201ENST00000251739 ACY3Q96HD9 319 aa7.38□□□□□ -1.23
VPS50-201ENST00000251739 CLUHP3Q96NS8 147 aa7.38□□□□□ -1.23
VPS50-201ENST00000251739 XCL2Q9UBD3 114 aa7.38□□□□□ -1.23
VPS50-201ENST00000251739 CACFD1Q9UGQ2 172 aa7.38□□□□□ -1.23
VPS50-201ENST00000251739 IGKV1D-37A0A075B6S9 117 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 DEFB131BA0A096LNP1 70 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 SOCS3O14543 225 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 CTDSP2O14595 271 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 CTDSPLO15194 276 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 RTL8CO15255 209 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 RD3LP0DJH9 198 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 SULT1A3P0DMM9 295 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 SULT1A4P0DMN0 295 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 NKX2-1P43699 371 aaPredicted RBP7.37□□□□□ -1.23
VPS50-201ENST00000251739 NUTF2P61970 127 aaKnown RBP7.37□□□□□ -1.23
VPS50-201ENST00000251739 SUPT4H1P63272 117 aaKnown RBP7.37□□□□□ -1.23
VPS50-201ENST00000251739 GDF5OSQ5U4N7 250 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 OR8G2PQ6IF36 304 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 ZNF767PQ75MW2 155 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 POM121L12Q8N7R1 296 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 ZNF709Q8N972 641 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 SUN5Q8TC36 379 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 RNF125Q96EQ8 232 aa7.37□□□□□ -1.23
VPS50-201ENST00000251739 PRRT1Q99946 306 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms