RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 IGLV1-47P01700 117 aa17.33■□□□□ 0.37
SH2D3A-201ENST00000245908 TBR1Q16650 682 aa17.33■□□□□ 0.37
SH2D3A-201ENST00000245908 MRPL54Q6P161 138 aaKnown RBP17.33■□□□□ 0.37
SH2D3A-201ENST00000245908 STPG4Q8N801 248 aa17.33■□□□□ 0.37
SH2D3A-201ENST00000245908 ZNF586Q9NXT0 402 aa17.33■□□□□ 0.37
SH2D3A-201ENST00000245908 RALYQ9UKM9 306 aaKnown RBP17.33■□□□□ 0.37
SH2D3A-201ENST00000245908 PCNX1Q96RV3 2341 aa17.33■□□□□ 0.36
SH2D3A-201ENST00000245908 TNXAQ16473 311 aa17.33■□□□□ 0.36
SH2D3A-201ENST00000245908 SIGLECL1Q8N7X8 197 aa17.33■□□□□ 0.36
SH2D3A-201ENST00000245908 FAM168AQ92567 244 aa17.33■□□□□ 0.36
SH2D3A-201ENST00000245908 PKDREJQ9NTG1 2253 aa17.33■□□□□ 0.36
SH2D3A-201ENST00000245908 RIF1Q5UIP0 2472 aaKnown RBP17.33■□□□□ 0.36
SH2D3A-201ENST00000245908 K7EP13 123 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 CCL25O15444 150 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 PLAUP00749 431 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 CA1P00915 261 aaPredicted RBP17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 CNTFRP26992 372 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 CDKN1BP46527 198 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 PRRX1P54821 245 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 PAX2Q02962 417 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 TMEM116Q8NCL8 245 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 ACACAQ13085 2346 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 TRAV34A0A0B4J273 112 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 DIRC3C9JPN6 131 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 BMPR1BO00238 502 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 CD3EP07766 207 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 PTTG1IPP53801 180 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 KIAA1644Q3SXP7 199 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 SPATA45Q537H7 98 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 SIGLEC9Q9Y336 463 aa17.32■□□□□ 0.36
SH2D3A-201ENST00000245908 GPX1P07203 203 aa17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 ORM2P19652 201 aa17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 RBPJQ06330 500 aa17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 SPACA3Q8IXA5 215 aa17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 OR1B1Q8NGR6 318 aa17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 WIPF2Q8TF74 440 aaPredicted RBP17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 GRAMD2BQ96HH9 432 aa17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 LAMTOR2Q9Y2Q5 125 aa17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 MAP1BP46821 2468 aaKnown RBP17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 PLXNB1O43157 2135 aa17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 RASL11AQ6T310 242 aa17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 SSBP3Q9BWW4 388 aaPredicted RBP17.31■□□□□ 0.36
SH2D3A-201ENST00000245908 IGHV1-3A0A0C4DH29 117 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 TOMM40O96008 361 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 IGLC2P0DOY2 106 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 IGLC3P0DOY3 106 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 ZNF841Q6ZN19 808 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 NUDT10Q8NFP7 164 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 NUDT11Q96G61 164 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 VKORC1Q9BQB6 163 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 C7orf69Q9H7B7 122 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 ZNF331Q9NQX6 463 aaPredicted RBP17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 EPDR1Q9UM22 224 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 ATMQ13315 3056 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 ZFHX2Q9C0A1 2572 aaPredicted RBP17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 BUB1B-PAK6H3BSN5 160 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 CORTO00230 105 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 DLX1P56177 255 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 KRTDAPP60985 99 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 GNG5P63218 68 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 C19orf35Q6ZS72 473 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 KCNS1Q96KK3 526 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 CHRDL1Q9BU40 450 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 CLEC7AQ9BXN2 247 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 RNF114Q9Y508 228 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 INSIG2Q9Y5U4 225 aa17.3■□□□□ 0.36
SH2D3A-201ENST00000245908 SRIP30626 198 aa17.29■□□□□ 0.36
SH2D3A-201ENST00000245908 HYPMO75409 117 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 APCSP02743 223 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 SLC25A5P05141 298 aaKnown RBP17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 HNRNPA3P51991 378 aaKnown RBP17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 PLP1P60201 277 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 ASPHD1Q5U4P2 390 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 SMIM12Q96EX1 92 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 KLF12Q9Y4X4 402 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 TEX22C9J3V5 150 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 ZNF253O75346 499 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 UBE2V1Q13404 147 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 Q6ZN92 141 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 RCHY1Q96PM5 261 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 TXN2Q99757 166 aa17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 F11RQ9Y624 299 aaKnown RBP17.28■□□□□ 0.36
SH2D3A-201ENST00000245908 RBP4P02753 201 aa17.27■□□□□ 0.36
SH2D3A-201ENST00000245908 UBE2G1P62253 170 aa17.27■□□□□ 0.36
SH2D3A-201ENST00000245908 PPP1R27Q86WC6 154 aa17.27■□□□□ 0.36
SH2D3A-201ENST00000245908 BLNKQ8WV28 456 aa17.27■□□□□ 0.36
SH2D3A-201ENST00000245908 A0A1W2PS18 150 aa17.27■□□□□ 0.35
SH2D3A-201ENST00000245908 PGPA6NDG6 321 aa17.27■□□□□ 0.35
SH2D3A-201ENST00000245908 LYNX1G3V0Z9 82 aa17.27■□□□□ 0.35
SH2D3A-201ENST00000245908 NBEAP1P0C6P0 100 aa17.27■□□□□ 0.35
SH2D3A-201ENST00000245908 APELAP0DMC3 54 aa17.27■□□□□ 0.35
SH2D3A-201ENST00000245908 LYNX1P0DP58 116 aa17.27■□□□□ 0.35
SH2D3A-201ENST00000245908 GP9P14770 177 aa17.27■□□□□ 0.35
SH2D3A-201ENST00000245908 NUP35Q8NFH5 326 aa17.27■□□□□ 0.35
SH2D3A-201ENST00000245908 TBL2Q9Y4P3 447 aaKnown RBP17.27■□□□□ 0.35
SH2D3A-201ENST00000245908 K7ENP7 123 aa17.26■□□□□ 0.35
SH2D3A-201ENST00000245908 HIST1H1EP10412 219 aaKnown RBP17.26■□□□□ 0.35
SH2D3A-201ENST00000245908 PRB3Q04118 309 aaPredicted RBP17.26■□□□□ 0.35
SH2D3A-201ENST00000245908 OR2D3Q8NGH3 330 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms