RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 TP53BP1Q12888 1972 aaPredicted RBP11.03□□□□□ -0.64
NEK4-201ENST00000233027 NMSQ5H8A3 153 aa11.03□□□□□ -0.64
NEK4-201ENST00000233027 TMEM167AQ8TBQ9 72 aa11.03□□□□□ -0.64
NEK4-201ENST00000233027 TRAV21A0A0B4J279 112 aa11.02□□□□□ -0.64
NEK4-201ENST00000233027 D6R8Y8 96 aa11.02□□□□□ -0.64
NEK4-201ENST00000233027 CD300EQ496F6 205 aaPredicted RBP11.02□□□□□ -0.64
NEK4-201ENST00000233027 AGMATQ9BSE5 352 aa11.02□□□□□ -0.64
NEK4-201ENST00000233027 SNRNP200O75643 2136 aaKnown RBP11.02□□□□□ -0.64
NEK4-201ENST00000233027 SRSF7Q16629 238 aaKnown RBP eCLIP11.02□□□□□ -0.64
NEK4-201ENST00000233027 TMEM42Q69YG0 159 aa11.02□□□□□ -0.64
NEK4-201ENST00000233027 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.02□□□□□ -0.65
NEK4-201ENST00000233027 ADCYAP1P18509 176 aa11.02□□□□□ -0.65
NEK4-201ENST00000233027 KLRD1Q13241 179 aa11.02□□□□□ -0.65
NEK4-201ENST00000233027 NXT2Q9NPJ8 142 aaKnown RBP11.02□□□□□ -0.65
NEK4-201ENST00000233027 ALPK2Q86TB3 2170 aa11.02□□□□□ -0.65
NEK4-201ENST00000233027 SVILO95425 2214 aa11.02□□□□□ -0.65
NEK4-201ENST00000233027 A0A1B0GW64 132 aa11.02□□□□□ -0.65
NEK4-201ENST00000233027 CD28P10747 220 aa11.02□□□□□ -0.65
NEK4-201ENST00000233027 TMEM200BQ69YZ2 307 aa11.02□□□□□ -0.65
NEK4-201ENST00000233027 RBMY1BA6NDE4 496 aaKnown RBP11.01□□□□□ -0.65
NEK4-201ENST00000233027 RBMY1EA6NEQ0 496 aaKnown RBP11.01□□□□□ -0.65
NEK4-201ENST00000233027 RBMY1DP0C7P1 496 aaKnown RBP11.01□□□□□ -0.65
NEK4-201ENST00000233027 RBMY1A1P0DJD3 496 aaKnown RBP11.01□□□□□ -0.65
NEK4-201ENST00000233027 RBMY1CP0DJD4 496 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 SAMD5Q5TGI4 173 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 CRIPAKQ8N1N5 446 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 CYSLTR1Q9Y271 337 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 ZFP36L1Q07352 338 aaKnown RBP11.01□□□□□ -0.65
NEK4-201ENST00000233027 LCN12Q6JVE5 192 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 STHQ8IWL8 128 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 QRFPP83859 136 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 SIGLEC15Q6ZMC9 328 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 ATP5L2Q7Z4Y8 100 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 ZNF124Q15973 351 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 CFAP161Q6P656 301 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 SLC25A39Q9BZJ4 359 aaPredicted RBP11.01□□□□□ -0.65
NEK4-201ENST00000233027 IGHV2-26A0A0B4J1V2 119 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 THBDP07204 575 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 PSG1P11464 419 aa11.01□□□□□ -0.65
NEK4-201ENST00000233027 VDAC2P45880 294 aaPredicted RBP11.01□□□□□ -0.65
NEK4-201ENST00000233027 MBNL3Q9NUK0 354 aaKnown RBP11.01□□□□□ -0.65
NEK4-201ENST00000233027 LINC00473A8K010 186 aa11□□□□□ -0.65
NEK4-201ENST00000233027 RALGAPA1Q6GYQ0 2036 aa11□□□□□ -0.65
NEK4-201ENST00000233027 NTF4P34130 210 aa11□□□□□ -0.65
NEK4-201ENST00000233027 PYY3Q5JQD4 70 aa11□□□□□ -0.65
NEK4-201ENST00000233027 FAM166AQ6J272 317 aa11□□□□□ -0.65
NEK4-201ENST00000233027 LYZL1Q6UWQ5 148 aa11□□□□□ -0.65
NEK4-201ENST00000233027 MCRIP2Q9BUT9 160 aaKnown RBP11□□□□□ -0.65
NEK4-201ENST00000233027 IGHV3-73A0A0B4J1V6 119 aa11□□□□□ -0.65
NEK4-201ENST00000233027 A0A0G2JRQ6 117 aa11□□□□□ -0.65
NEK4-201ENST00000233027 TCRAP04437 139 aa11□□□□□ -0.65
NEK4-201ENST00000233027 Q0VFX4 171 aa11□□□□□ -0.65
NEK4-201ENST00000233027 RNF182Q8N6D2 247 aa11□□□□□ -0.65
NEK4-201ENST00000233027 NUP35Q8NFH5 326 aa11□□□□□ -0.65
NEK4-201ENST00000233027 RNASE6Q93091 150 aaKnown RBP11□□□□□ -0.65
NEK4-201ENST00000233027 ZNF479Q96JC4 524 aa11□□□□□ -0.65
NEK4-201ENST00000233027 PEMTQ9UBM1 199 aa11□□□□□ -0.65
NEK4-201ENST00000233027 NDUFS6O75380 124 aaKnown RBP11□□□□□ -0.65
NEK4-201ENST00000233027 IGFL4Q6B9Z1 124 aa11□□□□□ -0.65
NEK4-201ENST00000233027 NPFFR1Q9GZQ6 430 aa11□□□□□ -0.65
NEK4-201ENST00000233027 SCN5AQ14524 2016 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 A0A087X0K7 114 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 TRAV1-1A0A0B4J248 108 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 MALP21145 153 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 ORMDL2Q53FV1 153 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 TRAV8-4A0A0B4J246 113 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 ERVK11-1P61568 191 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 PAX8Q06710 450 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 LAGE3Q14657 143 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 HSD52Q0P140 79 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 TMEM219Q86XT9 240 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 C11orf68Q9H3H3 251 aaKnown RBP10.99□□□□□ -0.65
NEK4-201ENST00000233027 C1orf194Q5T5A4 169 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 C11orf44Q8N8P7 122 aa10.99□□□□□ -0.65
NEK4-201ENST00000233027 RPUSD1Q9UJJ7 312 aaKnown RBP10.99□□□□□ -0.65
NEK4-201ENST00000233027 TMEM14EPQ6UXP3 125 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 OR2K2Q8NGT1 345 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 IL18BPO95998 194 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 VMO1Q7Z5L0 202 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 KIF26BQ2KJY2 2108 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 TRAV40A0A0B4J280 105 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 ZNF138P52744 262 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 PSMG4Q5JS54 123 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 Q8TAT8 98 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 SRRM5B3KS81 715 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 PPBPP02775 128 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 KLF17Q5JT82 389 aaPredicted RBP10.98□□□□□ -0.65
NEK4-201ENST00000233027 ANAPC13Q9BS18 74 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 ABCA7Q8IZY2 2146 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 GUSBP1Q15486 140 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 SIGMAR1Q99720 223 aa10.98□□□□□ -0.65
NEK4-201ENST00000233027 F2Z2F3 143 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 NDPQ00604 133 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 C20orf204Q6ZNR8 217 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 MPDZO75970 2070 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 IGHV1-3A0A0C4DH29 117 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 Q6P435 159 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 E9PLN8 166 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 SH2D1AO60880 128 aa10.97□□□□□ -0.65
NEK4-201ENST00000233027 IGHV1-8P0DP01 117 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms