RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 APCSP02743 223 aa12.18□□□□□ -0.46
EFNB1-201ENST00000204961 GRNP28799 593 aaKnown RBP12.18□□□□□ -0.46
EFNB1-201ENST00000204961 EXOC3-AS1Q8N2X6 119 aa12.18□□□□□ -0.46
EFNB1-201ENST00000204961 RAB1CQ92928 201 aa12.18□□□□□ -0.46
EFNB1-201ENST00000204961 CTSZQ9UBR2 303 aa12.18□□□□□ -0.46
EFNB1-201ENST00000204961 CBY3A6NI87 242 aa12.18□□□□□ -0.46
EFNB1-201ENST00000204961 TMEM11P17152 192 aa12.18□□□□□ -0.46
EFNB1-201ENST00000204961 RPL19P84098 196 aaKnown RBP12.18□□□□□ -0.46
EFNB1-201ENST00000204961 PATE2Q6UY27 113 aa12.18□□□□□ -0.46
EFNB1-201ENST00000204961 CDC42EP3Q9UKI2 254 aa12.18□□□□□ -0.46
EFNB1-201ENST00000204961 C20orf202A1L168 122 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 MBD3L4A6NDZ8 208 aaPredicted RBP12.17□□□□□ -0.46
EFNB1-201ENST00000204961 MBD3L3A6NE82 208 aaPredicted RBP12.17□□□□□ -0.46
EFNB1-201ENST00000204961 MBD3L5A6NJ08 208 aaPredicted RBP12.17□□□□□ -0.46
EFNB1-201ENST00000204961 ZNF891A8MT65 544 aaPredicted RBP12.17□□□□□ -0.46
EFNB1-201ENST00000204961 CGB3P0DN86 165 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 CGB7P0DN87 165 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 MBD3L2Q8NHZ7 208 aaPredicted RBP12.17□□□□□ -0.46
EFNB1-201ENST00000204961 TMEM167BQ9NRX6 74 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 TNFRSF19Q9NS68 423 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 C17orf100A8MU93 164 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 HIGD1CA8MV81 97 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 H0YJW9 148 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 FOXC1Q12948 553 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 SLC25A48Q6ZT89 311 aaKnown RBP12.17□□□□□ -0.46
EFNB1-201ENST00000204961 RNASE8Q8TDE3 154 aaKnown RBP12.17□□□□□ -0.46
EFNB1-201ENST00000204961 A0A1W2PPI3 338 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 BMPR1BO00238 502 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 TNFRSF1AP19438 455 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 SLC25A2Q9BXI2 301 aa12.17□□□□□ -0.46
EFNB1-201ENST00000204961 IGFL4Q6B9Z1 124 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 NUDT10Q8NFP7 164 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 BORCS7Q96B45 105 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 NUDT11Q96G61 164 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 IGHV3OR16-13A0A075B7E8 117 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 IGHV3-74A0A0B4J1X5 117 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 KIR2DS2P43631 304 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 LRRC10Q5BKY1 277 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 PRNTQ86SH4 94 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 ONECUT1Q9UBC0 465 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 A0A1W2PS18 150 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 CIARTQ8N365 385 aaPredicted RBP12.16□□□□□ -0.46
EFNB1-201ENST00000204961 PNKDQ8N490 385 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 LOXL4Q96JB6 756 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 GAL3ST2Q9H3Q3 398 aa12.16□□□□□ -0.46
EFNB1-201ENST00000204961 PTPN13Q12923 2485 aa12.15□□□□□ -0.46
EFNB1-201ENST00000204961 C17orf77Q96MU5 243 aa12.15□□□□□ -0.46
EFNB1-201ENST00000204961 M0R2Z0 102 aa12.15□□□□□ -0.46
EFNB1-201ENST00000204961 ARF6P62330 175 aa12.15□□□□□ -0.46
EFNB1-201ENST00000204961 COTL1Q14019 142 aa12.15□□□□□ -0.46
EFNB1-201ENST00000204961 LINC00322Q6ZN03 302 aaPredicted RBP12.15□□□□□ -0.46
EFNB1-201ENST00000204961 TEX43Q6ZNM6 134 aa12.15□□□□□ -0.46
EFNB1-201ENST00000204961 PDPNQ86YL7 162 aa12.15□□□□□ -0.46
EFNB1-201ENST00000204961 PRSS33Q8NF86 280 aa12.15□□□□□ -0.46
EFNB1-201ENST00000204961 CORO2AQ92828 525 aa12.15□□□□□ -0.46
EFNB1-201ENST00000204961 DLL1O00548 723 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 C3orf79P0CE67 100 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 PAFAH1B2P68402 229 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 TMEM136Q6ZRR5 245 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 LINC00173Q6ZV60 143 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 FAM222BQ8WU58 562 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 C20orf144Q9BQM9 153 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 GDF5OSQ5U4N7 250 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 CRYBG3Q68DQ2 2970 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 ACACBO00763 2458 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 IGLV2-8P01709 118 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 GPX1P07203 203 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 NUP35Q8NFH5 326 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 OR4C13Q8NGP0 309 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 ADTRPQ96IZ2 230 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 INSIG2Q9Y5U4 225 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 ARL2-SNX15V9GYD0 113 aa12.14□□□□□ -0.47
EFNB1-201ENST00000204961 IGLV3-9A0A075B6K5 115 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 C22orf46C9J442 243 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 PEX7O00628 323 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 GOLT1AQ6ZVE7 132 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 CCL25O15444 150 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 ZNF841Q6ZN19 808 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 ZFHX3Q15911 3703 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 CGB1A6NKQ9 187 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 CD99P14209 185 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 YPEL3P61236 119 aaPredicted RBP12.13□□□□□ -0.47
EFNB1-201ENST00000204961 KLRD1Q13241 179 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 TMEM177Q53S58 311 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 BCL6BQ8N143 479 aaPredicted RBP12.13□□□□□ -0.47
EFNB1-201ENST00000204961 DAZAP1Q96EP5 407 aaKnown RBP12.13□□□□□ -0.47
EFNB1-201ENST00000204961 FAM167A-AS1Q96KT0 104 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 OR8B2Q96RD0 313 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 LAMTOR2Q9Y2Q5 125 aa12.13□□□□□ -0.47
EFNB1-201ENST00000204961 CX3CL1P78423 397 aa12.12□□□□□ -0.47
EFNB1-201ENST00000204961 ZC2HC1AQ96GY0 325 aa12.12□□□□□ -0.47
EFNB1-201ENST00000204961 ZFP30Q9Y2G7 519 aa12.12□□□□□ -0.47
EFNB1-201ENST00000204961 LINC00312Q9Y6C7 94 aa12.12□□□□□ -0.47
EFNB1-201ENST00000204961 HYPMO75409 117 aa12.12□□□□□ -0.47
EFNB1-201ENST00000204961 THBDP07204 575 aa12.12□□□□□ -0.47
EFNB1-201ENST00000204961 NBEAP1P0C6P0 100 aa12.12□□□□□ -0.47
EFNB1-201ENST00000204961 COMPP49747 757 aaPredicted RBP12.12□□□□□ -0.47
EFNB1-201ENST00000204961 NDUFA4L2Q9NRX3 87 aa12.12□□□□□ -0.47
EFNB1-201ENST00000204961 LOC389332A0A1B0GUA5 103 aa12.11□□□□□ -0.47
EFNB1-201ENST00000204961 M0R3E3 92 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms