RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 TEX13DA0A0J9YY54 714 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-213ENST00000641272 RPS10-NUDT3A0A1W2PQS6 291 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 CEBPZOSA8MTT3 80 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 RGS5O15539 181 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 HNRNPCP07910 306 aaKnown RBP eCLIP12.11□□□□□ -0.47
PHGDH-213ENST00000641272 SPP1P10451 314 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 OR10J1P30954 320 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 USF2Q15853 346 aaPredicted RBP12.11□□□□□ -0.47
PHGDH-213ENST00000641272 TMEM268Q5VZI3 342 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 PRSS54Q6PEW0 395 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 ZNF767PQ75MW2 155 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 SLC24A4Q8NFF2 622 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 GPR146Q96CH1 333 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 APLNQ9ULZ1 77 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 CELA1Q9UNI1 258 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 X6R8D5 127 aa12.11□□□□□ -0.47
PHGDH-213ENST00000641272 ELOA3CA0A087WX78 387 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-213ENST00000641272 IL4P05112 153 aa12.1□□□□□ -0.47
PHGDH-213ENST00000641272 MIFP14174 115 aa12.1□□□□□ -0.47
PHGDH-213ENST00000641272 HTR2BP41595 481 aa12.1□□□□□ -0.47
PHGDH-213ENST00000641272 RPL5P46777 297 aaKnown RBP12.1□□□□□ -0.47
PHGDH-213ENST00000641272 DHODHQ02127 395 aa12.1□□□□□ -0.47
PHGDH-213ENST00000641272 MORN3Q6PF18 240 aaPredicted RBP12.1□□□□□ -0.47
PHGDH-213ENST00000641272 SELENOHQ8IZQ5 122 aaKnown RBP12.1□□□□□ -0.47
PHGDH-213ENST00000641272 OR1S2Q8NGQ3 325 aa12.1□□□□□ -0.47
PHGDH-213ENST00000641272 GLYATL2Q8WU03 294 aa12.1□□□□□ -0.47
PHGDH-213ENST00000641272 TMEM170AQ8WVE7 144 aa12.1□□□□□ -0.47
PHGDH-213ENST00000641272 GLMPQ8WWB7 406 aa12.1□□□□□ -0.47
PHGDH-213ENST00000641272 RBPMSQ93062 196 aaKnown RBP12.1□□□□□ -0.47
PHGDH-213ENST00000641272 ACY3Q96HD9 319 aa12.1□□□□□ -0.47
PHGDH-213ENST00000641272 HELTA6NFD8 242 aa12.09□□□□□ -0.47
PHGDH-213ENST00000641272 GABARAPH6UMI1 98 aa12.09□□□□□ -0.47
PHGDH-213ENST00000641272 CDS2O95674 445 aa12.09□□□□□ -0.47
PHGDH-213ENST00000641272 C2orf83Q53S99 150 aa12.09□□□□□ -0.47
PHGDH-213ENST00000641272 C16orf54Q6UWD8 224 aa12.09□□□□□ -0.47
PHGDH-213ENST00000641272 FAM219AQ8IW50 185 aa12.09□□□□□ -0.47
PHGDH-213ENST00000641272 OR4C16Q8NGL9 310 aa12.09□□□□□ -0.47
PHGDH-213ENST00000641272 RTBDNQ9BSG5 229 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-213ENST00000641272 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.09□□□□□ -0.47
PHGDH-213ENST00000641272 TBC1D24Q9ULP9 559 aa12.09□□□□□ -0.47
PHGDH-213ENST00000641272 TRAV30A0A087WSZ9 112 aa12.08□□□□□ -0.48
PHGDH-213ENST00000641272 ZNF705EA8MWA4 302 aaPredicted RBP12.08□□□□□ -0.48
PHGDH-213ENST00000641272 C11orf94C9JXX5 98 aa12.08□□□□□ -0.48
PHGDH-213ENST00000641272 NPY1RP25929 384 aa12.08□□□□□ -0.48
PHGDH-213ENST00000641272 AARDQ4LEZ3 155 aa12.08□□□□□ -0.48
PHGDH-213ENST00000641272 TMEM41BQ5BJD5 291 aa12.08□□□□□ -0.48
PHGDH-213ENST00000641272 OR52E5Q8NH55 327 aa12.08□□□□□ -0.48
PHGDH-213ENST00000641272 Q8WTZ3 238 aa12.08□□□□□ -0.48
PHGDH-213ENST00000641272 HRH4Q9H3N8 390 aa12.08□□□□□ -0.48
PHGDH-213ENST00000641272 U3KQE9 123 aa12.08□□□□□ -0.48
PHGDH-213ENST00000641272 IGHV4-4A0A075B6R2 117 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 TRAV10A0A0B4J240 114 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 CRYM-AS1A6NIL9 109 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 DISC1C4P0D8 188 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 CTDSP2O14595 271 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 B3GALNT1O75752 331 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 SLC25A4P12235 298 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 EIF2B2P49770 351 aaKnown RBP12.07□□□□□ -0.48
PHGDH-213ENST00000641272 SPCS2Q15005 226 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 GSG1LQ6UXU4 331 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 RNASEH2CQ8TDP1 164 aaKnown RBP12.07□□□□□ -0.48
PHGDH-213ENST00000641272 SMIM4Q8WVI0 70 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 RAB40CQ96S21 281 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 XCL2Q9UBD3 114 aa12.07□□□□□ -0.48
PHGDH-213ENST00000641272 FAM90A26D6RGX4 464 aa12.06□□□□□ -0.48
PHGDH-213ENST00000641272 TCTAP57738 103 aa12.06□□□□□ -0.48
PHGDH-213ENST00000641272 DEFB1P60022 68 aa12.06□□□□□ -0.48
PHGDH-213ENST00000641272 CSNK1G2-AS1Q8NCQ2 148 aa12.06□□□□□ -0.48
PHGDH-213ENST00000641272 C15orf40Q8WUR7 153 aa12.06□□□□□ -0.48
PHGDH-213ENST00000641272 SCRT1Q9BWW7 348 aa12.06□□□□□ -0.48
PHGDH-213ENST00000641272 AKAIN1P0CW23 69 aa12.05□□□□□ -0.48
PHGDH-213ENST00000641272 YPEL3P61236 119 aaPredicted RBP12.05□□□□□ -0.48
PHGDH-213ENST00000641272 IL18Q14116 193 aa12.05□□□□□ -0.48
PHGDH-213ENST00000641272 SIGLEC15Q6ZMC9 328 aa12.05□□□□□ -0.48
PHGDH-213ENST00000641272 CENPSQ8N2Z9 138 aa12.05□□□□□ -0.48
PHGDH-213ENST00000641272 OR51S1Q8NGJ8 323 aa12.05□□□□□ -0.48
PHGDH-213ENST00000641272 OR51G1Q8NGK1 321 aa12.05□□□□□ -0.48
PHGDH-213ENST00000641272 PBDC1Q9BVG4 233 aa12.05□□□□□ -0.48
PHGDH-213ENST00000641272 TOMM40O96008 361 aa12.04□□□□□ -0.48
PHGDH-213ENST00000641272 IFNA10P01566 189 aa12.04□□□□□ -0.48
PHGDH-213ENST00000641272 IGKV3-20P01619 116 aa12.04□□□□□ -0.48
PHGDH-213ENST00000641272 SULT1A3P0DMM9 295 aa12.04□□□□□ -0.48
PHGDH-213ENST00000641272 SULT1A4P0DMN0 295 aa12.04□□□□□ -0.48
PHGDH-213ENST00000641272 FXYD7P58549 80 aa12.04□□□□□ -0.48
PHGDH-213ENST00000641272 SNRPD3P62318 126 aaKnown RBP12.04□□□□□ -0.48
PHGDH-213ENST00000641272 MRPS10P82664 201 aaKnown RBP12.04□□□□□ -0.48
PHGDH-213ENST00000641272 SSBP1Q04837 148 aaKnown RBP12.04□□□□□ -0.48
PHGDH-213ENST00000641272 SURF2Q15527 256 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-213ENST00000641272 NMSQ5H8A3 153 aa12.04□□□□□ -0.48
PHGDH-213ENST00000641272 CLVS1Q8IUQ0 354 aaPredicted RBP12.04□□□□□ -0.48
PHGDH-213ENST00000641272 NRN1Q9NPD7 142 aa12.04□□□□□ -0.48
PHGDH-213ENST00000641272 GPR132Q9UNW8 380 aa12.04□□□□□ -0.48
PHGDH-213ENST00000641272 KIAA1109Q2LD37 5005 aa12.03□□□□□ -0.48
PHGDH-213ENST00000641272 RD3LP0DJH9 198 aa12.03□□□□□ -0.48
PHGDH-213ENST00000641272 PSG1P11464 419 aa12.03□□□□□ -0.48
PHGDH-213ENST00000641272 C12orf74Q32Q52 190 aa12.03□□□□□ -0.48
PHGDH-213ENST00000641272 GDF5OSQ5U4N7 250 aa12.03□□□□□ -0.48
PHGDH-213ENST00000641272 ETFRF1Q6IPR1 90 aa12.03□□□□□ -0.48
PHGDH-213ENST00000641272 DTD1Q8TEA8 209 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms