RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 MIC13Q5XKP0 118 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 RBMS3Q6XE24 437 aaKnown RBP12.03□□□□□ -0.48
CLN6-219ENST00000637329 NECAP1Q8NC96 275 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 OR10G4Q8NGN3 311 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 OR10G9Q8NGN4 311 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 OR10G7Q8NGN6 311 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 MBD3L1Q8WWY6 194 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 RCC1LQ96I51 464 aaKnown RBP12.03□□□□□ -0.48
CLN6-219ENST00000637329 ATP6V0BQ99437 205 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 TXN2Q99757 166 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 ACTR3CQ9C0K3 210 aaPredicted RBP12.03□□□□□ -0.48
CLN6-219ENST00000637329 HRH4Q9H3N8 390 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 VSIRQ9H7M9 311 aa12.03□□□□□ -0.48
CLN6-219ENST00000637329 MRPL36Q9P0J6 103 aaKnown RBP12.03□□□□□ -0.48
CLN6-219ENST00000637329 FBN1P35555 2871 aaKnown RBP12.03□□□□□ -0.48
CLN6-219ENST00000637329 PLXNB1O43157 2135 aa12.02□□□□□ -0.48
CLN6-219ENST00000637329 TRAV30A0A087WSZ9 112 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 MFSD2BA6NFX1 497 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 FAM223BA6NKX1 122 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 YIF1AO95070 293 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 IGLC1P0CG04 106 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 CDC34P49427 236 aaPredicted RBP12.02□□□□□ -0.49
CLN6-219ENST00000637329 MFAP4P55083 255 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 UQCC3Q6UW78 93 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 FAM223AQ8IWN6 122 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 RPP25LQ8N5L8 163 aaKnown RBP12.02□□□□□ -0.49
CLN6-219ENST00000637329 OR5T1Q8NG75 326 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 MARC2Q969Z3 335 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 PRSS22Q9GZN4 317 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 TNFRSF19Q9NS68 423 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 CDC42EP3Q9UKI2 254 aa12.02□□□□□ -0.49
CLN6-219ENST00000637329 STAB1Q9NY15 2570 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 LINC01548A6NM66 108 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 G3V318 75 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 LINC00869P0C866 280 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 BLCAPP62952 87 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 ZNF726P1Q15940 193 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 BPIFCQ8NFQ6 507 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 PFDN5Q99471 154 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 RNF2Q99496 336 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 GAR1Q9NY12 217 aaKnown RBP12.01□□□□□ -0.49
CLN6-219ENST00000637329 C21orf62Q9NYP8 219 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 FBXL7Q9UJT9 491 aa12.01□□□□□ -0.49
CLN6-219ENST00000637329 TMEM89A2RUT3 159 aa12□□□□□ -0.49
CLN6-219ENST00000637329 MAP1LC3B2A6NCE7 125 aa12□□□□□ -0.49
CLN6-219ENST00000637329 CLDN34H7C241 214 aa12□□□□□ -0.49
CLN6-219ENST00000637329 OR2J3O76001 311 aa12□□□□□ -0.49
CLN6-219ENST00000637329 LY6G6DO95868 133 aa12□□□□□ -0.49
CLN6-219ENST00000637329 IGHV3-48P01763 117 aa12□□□□□ -0.49
CLN6-219ENST00000637329 PPIFP30405 207 aaKnown RBP12□□□□□ -0.49
CLN6-219ENST00000637329 RPL15P61313 204 aaKnown RBP12□□□□□ -0.49
CLN6-219ENST00000637329 RHOBP62745 196 aa12□□□□□ -0.49
CLN6-219ENST00000637329 RHOGP84095 191 aa12□□□□□ -0.49
CLN6-219ENST00000637329 CFHR3Q02985 330 aa12□□□□□ -0.49
CLN6-219ENST00000637329 FAM122CQ6P4D5 195 aa12□□□□□ -0.49
CLN6-219ENST00000637329 OR1L4Q8NGR5 311 aa12□□□□□ -0.49
CLN6-219ENST00000637329 SFT2D1Q8WV19 159 aa12□□□□□ -0.49
CLN6-219ENST00000637329 MRPL32Q9BYC8 188 aaKnown RBP12□□□□□ -0.49
CLN6-219ENST00000637329 MAP1LC3BQ9GZQ8 125 aa12□□□□□ -0.49
CLN6-219ENST00000637329 SLC25A22Q9H936 323 aa12□□□□□ -0.49
CLN6-219ENST00000637329 TRBV7-1A0A0A6YYK4 115 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 IGHV3-21A0A0B4J1V1 117 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 A0A1W2PPV4 95 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 GNG7O60262 68 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 NDUFB8O95169 186 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 OR5G3P0C626 314 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 SPSB3Q6PJ21 355 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 Q8N2B8 174 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 GATAD1Q8WUU5 269 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 PBDC1Q9BVG4 233 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 ZNF355PQ9NSJ1 428 aa11.99□□□□□ -0.49
CLN6-219ENST00000637329 MXRA5Q9NR99 2828 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 ELOA3CA0A087WX78 387 aaPredicted RBP11.98□□□□□ -0.49
CLN6-219ENST00000637329 DNAJC9-AS1A6NH13 148 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 IGLV1-40P01703 118 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 SRD5A1P18405 259 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 S100A1P23297 94 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 PLP1P60201 277 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 YPEL3P61236 119 aaPredicted RBP11.98□□□□□ -0.49
CLN6-219ENST00000637329 ZNF90Q03938 601 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 PMS2P11Q13670 270 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 C15orf32Q32M92 178 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 SSX7Q7RTT5 188 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 ZNF502Q8TBZ5 544 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 RAB24Q969Q5 203 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 EEF1AKMT3Q96AZ1 226 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 USMG5Q96IX5 58 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 FAM210AQ96ND0 272 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 ZNF702PQ9H963 129 aa11.98□□□□□ -0.49
CLN6-219ENST00000637329 FN1P02751 2386 aaKnown RBP11.97□□□□□ -0.49
CLN6-219ENST00000637329 PSMB11A5LHX3 300 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 F8W735 103 aaPredicted RBP11.97□□□□□ -0.49
CLN6-219ENST00000637329 COX7A2P2O60397 106 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 TOMM40O96008 361 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 IGKV1-17P01599 117 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 PPT1P50897 306 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 Q56UQ5 140 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 GCSAMLQ5JQS6 135 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 FAM209BQ5JX69 171 aa11.97□□□□□ -0.49
CLN6-219ENST00000637329 LCN15Q6UWW0 184 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms