RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 ZNF846Q147U1 533 aa13.56□□□□□ -0.24
CLN6-210ENST00000635747 TMED4Q7Z7H5 227 aa13.56□□□□□ -0.24
CLN6-210ENST00000635747 STPG3Q8N7X2 389 aa13.56□□□□□ -0.24
CLN6-210ENST00000635747 OR1S2Q8NGQ3 325 aa13.56□□□□□ -0.24
CLN6-210ENST00000635747 ST8SIA2Q92186 375 aa13.56□□□□□ -0.24
CLN6-210ENST00000635747 CCDC32Q9BV29 185 aa13.56□□□□□ -0.24
CLN6-210ENST00000635747 PRR13Q9NZ81 148 aa13.56□□□□□ -0.24
CLN6-210ENST00000635747 MRPL36Q9P0J6 103 aaKnown RBP13.56□□□□□ -0.24
CLN6-210ENST00000635747 TRAV2A0A0B4J234 112 aa13.55□□□□□ -0.24
CLN6-210ENST00000635747 DNASE2O00115 360 aaPredicted RBP13.55□□□□□ -0.24
CLN6-210ENST00000635747 IFNA10P01566 189 aa13.55□□□□□ -0.24
CLN6-210ENST00000635747 IGKV1-17P01599 117 aa13.55□□□□□ -0.24
CLN6-210ENST00000635747 TFPI2P48307 235 aa13.55□□□□□ -0.24
CLN6-210ENST00000635747 RPL11P62913 178 aaKnown RBP13.55□□□□□ -0.24
CLN6-210ENST00000635747 PRSS54Q6PEW0 395 aa13.55□□□□□ -0.24
CLN6-210ENST00000635747 DTD1Q8TEA8 209 aa13.55□□□□□ -0.24
CLN6-210ENST00000635747 Q8WTZ3 238 aa13.55□□□□□ -0.24
CLN6-210ENST00000635747 SDHCQ99643 169 aaPredicted RBP13.55□□□□□ -0.24
CLN6-210ENST00000635747 OVOL2Q9BRP0 275 aa13.55□□□□□ -0.24
CLN6-210ENST00000635747 IGKV3-7A0A075B6H7 116 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 DFFBO76075 338 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 NXPH3O95157 252 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 CRYBB3P26998 211 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 OR10J1P30954 320 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 RND2P52198 227 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 YPEL3P61236 119 aaPredicted RBP13.54□□□□□ -0.24
CLN6-210ENST00000635747 TRIQKQ629K1 86 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 WFDC3Q8IUB2 231 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 GBGT1Q8N5D6 347 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 LRTM2Q8N967 370 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 OR1S1Q8NH92 325 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 GRAMD2BQ96HH9 432 aa13.54□□□□□ -0.24
CLN6-210ENST00000635747 SPRY2O43597 315 aa13.53□□□□□ -0.24
CLN6-210ENST00000635747 APOHP02749 345 aaPredicted RBP13.53□□□□□ -0.24
CLN6-210ENST00000635747 IGLC1P0CG04 106 aa13.53□□□□□ -0.24
CLN6-210ENST00000635747 SLC25A6P12236 298 aa13.53□□□□□ -0.24
CLN6-210ENST00000635747 VAMP1P23763 118 aa13.53□□□□□ -0.24
CLN6-210ENST00000635747 INPP1P49441 399 aa13.53□□□□□ -0.24
CLN6-210ENST00000635747 EIF2B2P49770 351 aaKnown RBP13.53□□□□□ -0.24
CLN6-210ENST00000635747 RBMS2Q15434 407 aaKnown RBP13.53□□□□□ -0.24
CLN6-210ENST00000635747 TIGITQ495A1 244 aa13.53□□□□□ -0.24
CLN6-210ENST00000635747 MS4A6AQ9H2W1 248 aa13.53□□□□□ -0.24
CLN6-210ENST00000635747 RBKSQ9H477 322 aa13.53□□□□□ -0.24
CLN6-210ENST00000635747 CSMD3Q7Z407 3707 aa13.52□□□□□ -0.24
CLN6-210ENST00000635747 NAP1L6A6NFF2 107 aa13.52□□□□□ -0.25
CLN6-210ENST00000635747 IL7P13232 177 aa13.52□□□□□ -0.25
CLN6-210ENST00000635747 UBE2MP61081 183 aaKnown RBP13.52□□□□□ -0.25
CLN6-210ENST00000635747 BAK1Q16611 211 aa13.52□□□□□ -0.25
CLN6-210ENST00000635747 APRG1Q8IVJ8 170 aa13.52□□□□□ -0.25
CLN6-210ENST00000635747 CENPSQ8N2Z9 138 aa13.52□□□□□ -0.25
CLN6-210ENST00000635747 TMEM170AQ8WVE7 144 aa13.52□□□□□ -0.25
CLN6-210ENST00000635747 MAP6D1Q9H9H5 199 aa13.52□□□□□ -0.25
CLN6-210ENST00000635747 TMED3Q9Y3Q3 217 aa13.52□□□□□ -0.25
CLN6-210ENST00000635747 IGHV3-66A0A0C4DH42 116 aa13.51□□□□□ -0.25
CLN6-210ENST00000635747 FAM90A26D6RGX4 464 aa13.51□□□□□ -0.25
CLN6-210ENST00000635747 SFT2D2O95562 160 aa13.51□□□□□ -0.25
CLN6-210ENST00000635747 IFNA4P05014 189 aa13.51□□□□□ -0.25
CLN6-210ENST00000635747 RPL35AP18077 110 aaKnown RBP13.51□□□□□ -0.25
CLN6-210ENST00000635747 LILRB2Q8N423 598 aa13.51□□□□□ -0.25
CLN6-210ENST00000635747 NPIPB3Q92617 1050 aa13.51□□□□□ -0.25
CLN6-210ENST00000635747 C7orf50Q9BRJ6 194 aaKnown RBP13.51□□□□□ -0.25
CLN6-210ENST00000635747 CSTL1Q9H114 145 aa13.51□□□□□ -0.25
CLN6-210ENST00000635747 STARD9Q9P2P6 4700 aa13.5□□□□□ -0.25
CLN6-210ENST00000635747 PITX3O75364 302 aa13.5□□□□□ -0.25
CLN6-210ENST00000635747 MED6O75586 246 aa13.5□□□□□ -0.25
CLN6-210ENST00000635747 GPX4P36969 197 aaPredicted RBP13.5□□□□□ -0.25
CLN6-210ENST00000635747 P2RY1P47900 373 aa13.5□□□□□ -0.25
CLN6-210ENST00000635747 DEFB135Q30KP9 77 aa13.5□□□□□ -0.25
CLN6-210ENST00000635747 RNF183Q96D59 192 aa13.5□□□□□ -0.25
CLN6-210ENST00000635747 ACY3Q96HD9 319 aa13.5□□□□□ -0.25
CLN6-210ENST00000635747 RABAC1Q9UI14 185 aa13.5□□□□□ -0.25
CLN6-210ENST00000635747 TENM2Q9NT68 2774 aa13.5□□□□□ -0.25
CLN6-210ENST00000635747 HELTA6NFD8 242 aa13.49□□□□□ -0.25
CLN6-210ENST00000635747 MPTX1A8MV57 137 aa13.49□□□□□ -0.25
CLN6-210ENST00000635747 HNRNPCP07910 306 aaKnown RBP eCLIP13.49□□□□□ -0.25
CLN6-210ENST00000635747 RD3LP0DJH9 198 aa13.49□□□□□ -0.25
CLN6-210ENST00000635747 AP2S1P53680 142 aaPredicted RBP13.49□□□□□ -0.25
CLN6-210ENST00000635747 RAB11AP62491 216 aa13.49□□□□□ -0.25
CLN6-210ENST00000635747 RPP30P78346 268 aaKnown RBP13.49□□□□□ -0.25
CLN6-210ENST00000635747 CIB3Q96Q77 187 aaPredicted RBP13.49□□□□□ -0.25
CLN6-210ENST00000635747 U3KQE9 123 aa13.49□□□□□ -0.25
CLN6-210ENST00000635747 DYNC2H1Q8NCM8 4307 aaKnown RBP13.49□□□□□ -0.25
CLN6-210ENST00000635747 LCE6AA0A183 80 aa13.48□□□□□ -0.25
CLN6-210ENST00000635747 CENPXA8MT69 81 aa13.48□□□□□ -0.25
CLN6-210ENST00000635747 TOMM40O96008 361 aa13.48□□□□□ -0.25
CLN6-210ENST00000635747 PPP1R1AQ13522 171 aa13.48□□□□□ -0.25
CLN6-210ENST00000635747 PFDN2Q9UHV9 154 aa13.48□□□□□ -0.25
CLN6-210ENST00000635747 IL4P05112 153 aa13.47□□□□□ -0.25
CLN6-210ENST00000635747 FABP1P07148 127 aa13.47□□□□□ -0.25
CLN6-210ENST00000635747 NUP62P37198 522 aaPredicted RBP13.47□□□□□ -0.25
CLN6-210ENST00000635747 DEFB131AP59861 70 aa13.47□□□□□ -0.25
CLN6-210ENST00000635747 TMEM217Q8N7C4 229 aa13.47□□□□□ -0.25
CLN6-210ENST00000635747 STXBP6Q8NFX7 210 aa13.47□□□□□ -0.25
CLN6-210ENST00000635747 GATAD1Q8WUU5 269 aa13.47□□□□□ -0.25
CLN6-210ENST00000635747 SLC35E1Q96K37 410 aa13.47□□□□□ -0.25
CLN6-210ENST00000635747 SACSQ9NZJ4 4579 aa13.47□□□□□ -0.25
CLN6-210ENST00000635747 K7EQG2 157 aa13.46□□□□□ -0.25
CLN6-210ENST00000635747 UPK1BO75841 260 aa13.46□□□□□ -0.25
CLN6-210ENST00000635747 NDUFB6O95139 128 aa13.46□□□□□ -0.25
CLN6-210ENST00000635747 ATF4P18848 351 aaPredicted RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms