RNA–Protein interactions for RNA: ENST00000624668.3

ATRX-217, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-217ENST00000624668 PRR20CP86479 221 aa11.29□□□□□ -0.6
ATRX-217ENST00000624668 PRR20DP86480 221 aa11.29□□□□□ -0.6
ATRX-217ENST00000624668 PRR20BP86481 221 aa11.29□□□□□ -0.6
ATRX-217ENST00000624668 PRR20AP86496 221 aa11.29□□□□□ -0.6
ATRX-217ENST00000624668 SSBP1Q04837 148 aaKnown RBP11.29□□□□□ -0.6
ATRX-217ENST00000624668 TMEM230Q96A57 120 aa11.29□□□□□ -0.6
ATRX-217ENST00000624668 GPR132Q9UNW8 380 aa11.29□□□□□ -0.6
ATRX-217ENST00000624668 A0A1W2PS18 150 aa11.28□□□□□ -0.6
ATRX-217ENST00000624668 RBMY1A1P0DJD3 496 aaKnown RBP11.28□□□□□ -0.6
ATRX-217ENST00000624668 RBMY1CP0DJD4 496 aa11.28□□□□□ -0.6
ATRX-217ENST00000624668 HTR2BP41595 481 aa11.28□□□□□ -0.6
ATRX-217ENST00000624668 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
ATRX-217ENST00000624668 SURF2Q15527 256 aaPredicted RBP11.28□□□□□ -0.6
ATRX-217ENST00000624668 C2orf83Q53S99 150 aa11.28□□□□□ -0.6
ATRX-217ENST00000624668 TMEM268Q5VZI3 342 aa11.28□□□□□ -0.6
ATRX-217ENST00000624668 STHQ8IWL8 128 aa11.28□□□□□ -0.6
ATRX-217ENST00000624668 GRAMD2BQ96HH9 432 aa11.28□□□□□ -0.6
ATRX-217ENST00000624668 HEYLQ9NQ87 328 aaPredicted RBP11.28□□□□□ -0.6
ATRX-217ENST00000624668 C14orf166Q9Y224 244 aaKnown RBP11.28□□□□□ -0.6
ATRX-217ENST00000624668 DNAH6Q9C0G6 4158 aa11.28□□□□□ -0.6
ATRX-217ENST00000624668 IGHV4-28A0A0C4DH34 117 aa11.27□□□□□ -0.61
ATRX-217ENST00000624668 OR10J1P30954 320 aa11.27□□□□□ -0.61
ATRX-217ENST00000624668 MRPS10P82664 201 aaKnown RBP11.27□□□□□ -0.61
ATRX-217ENST00000624668 USF2Q15853 346 aaPredicted RBP11.27□□□□□ -0.61
ATRX-217ENST00000624668 C16orf54Q6UWD8 224 aa11.27□□□□□ -0.61
ATRX-217ENST00000624668 SLC24A4Q8NFF2 622 aa11.27□□□□□ -0.61
ATRX-217ENST00000624668 OR51S1Q8NGJ8 323 aa11.27□□□□□ -0.61
ATRX-217ENST00000624668 OR1S2Q8NGQ3 325 aa11.27□□□□□ -0.61
ATRX-217ENST00000624668 GLMPQ8WWB7 406 aa11.27□□□□□ -0.61
ATRX-217ENST00000624668 MFFQ9GZY8 342 aa11.27□□□□□ -0.61
ATRX-217ENST00000624668 TMEM56-RWDD3S4R434 201 aa11.27□□□□□ -0.61
ATRX-217ENST00000624668 X6R8D5 127 aa11.27□□□□□ -0.61
ATRX-217ENST00000624668 TRAV30A0A087WSZ9 112 aa11.26□□□□□ -0.61
ATRX-217ENST00000624668 CEBPZOSA8MTT3 80 aa11.26□□□□□ -0.61
ATRX-217ENST00000624668 DISC1C4P0D8 188 aa11.26□□□□□ -0.61
ATRX-217ENST00000624668 CTDSPLO15194 276 aa11.26□□□□□ -0.61
ATRX-217ENST00000624668 YPEL3P61236 119 aaPredicted RBP11.26□□□□□ -0.61
ATRX-217ENST00000624668 DHODHQ02127 395 aa11.26□□□□□ -0.61
ATRX-217ENST00000624668 ACTL10Q5JWF8 245 aa11.26□□□□□ -0.61
ATRX-217ENST00000624668 GPR141Q7Z602 305 aa11.26□□□□□ -0.61
ATRX-217ENST00000624668 CSNK1G2-AS1Q8NCQ2 148 aa11.26□□□□□ -0.61
ATRX-217ENST00000624668 DYNC2LI1Q8TCX1 351 aa11.26□□□□□ -0.61
ATRX-217ENST00000624668 RNASEH2CQ8TDP1 164 aaKnown RBP11.26□□□□□ -0.61
ATRX-217ENST00000624668 MRPS26Q9BYN8 205 aaKnown RBP11.26□□□□□ -0.61
ATRX-217ENST00000624668 CLEC5AQ9NY25 188 aa11.26□□□□□ -0.61
ATRX-217ENST00000624668 RPS10-NUDT3A0A1W2PQS6 291 aa11.25□□□□□ -0.61
ATRX-217ENST00000624668 IFNA4P05014 189 aa11.25□□□□□ -0.61
ATRX-217ENST00000624668 HNRNPCP07910 306 aaKnown RBP eCLIP11.25□□□□□ -0.612e-8■■■■□ 26.4
ATRX-217ENST00000624668 AKAIN1P0CW23 69 aa11.25□□□□□ -0.61
ATRX-217ENST00000624668 SLC25A4P12235 298 aa11.25□□□□□ -0.61
ATRX-217ENST00000624668 DHRS2Q13268 280 aa11.25□□□□□ -0.61
ATRX-217ENST00000624668 IL18Q14116 193 aa11.25□□□□□ -0.61
ATRX-217ENST00000624668 NMSQ5H8A3 153 aa11.25□□□□□ -0.61
ATRX-217ENST00000624668 C2CD4CQ8TF44 421 aa11.25□□□□□ -0.61
ATRX-217ENST00000624668 NPIPB3Q92617 1050 aa11.25□□□□□ -0.61
ATRX-217ENST00000624668 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
ATRX-217ENST00000624668 ANKRD20A5PA0PJZ0 165 aa11.24□□□□□ -0.61
ATRX-217ENST00000624668 ZNF705EA8MWA4 302 aaPredicted RBP11.24□□□□□ -0.61
ATRX-217ENST00000624668 IL4P05112 153 aa11.24□□□□□ -0.61
ATRX-217ENST00000624668 SPP1P10451 314 aa11.24□□□□□ -0.61
ATRX-217ENST00000624668 NPY1RP25929 384 aa11.24□□□□□ -0.61
ATRX-217ENST00000624668 SUPT4H1P63272 117 aaKnown RBP11.24□□□□□ -0.61
ATRX-217ENST00000624668 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
ATRX-217ENST00000624668 MORN3Q6PF18 240 aaPredicted RBP11.24□□□□□ -0.61
ATRX-217ENST00000624668 CLVS1Q8IUQ0 354 aaPredicted RBP11.24□□□□□ -0.61
ATRX-217ENST00000624668 Q8WTZ3 238 aa11.24□□□□□ -0.61
ATRX-217ENST00000624668 DIRAS2Q96HU8 199 aa11.24□□□□□ -0.61
ATRX-217ENST00000624668 RAB40CQ96S21 281 aa11.24□□□□□ -0.61
ATRX-217ENST00000624668 PRRT1Q99946 306 aa11.24□□□□□ -0.61
ATRX-217ENST00000624668 APLNQ9ULZ1 77 aa11.24□□□□□ -0.61
ATRX-217ENST00000624668 FAM90A26D6RGX4 464 aa11.23□□□□□ -0.61
ATRX-217ENST00000624668 SCGB2A1O75556 95 aa11.23□□□□□ -0.61
ATRX-217ENST00000624668 SULT1A3P0DMM9 295 aa11.23□□□□□ -0.61
ATRX-217ENST00000624668 SULT1A4P0DMN0 295 aa11.23□□□□□ -0.61
ATRX-217ENST00000624668 HLA-DMBP28068 263 aa11.23□□□□□ -0.61
ATRX-217ENST00000624668 IL22RA2Q969J5 263 aa11.23□□□□□ -0.61
ATRX-217ENST00000624668 ACY3Q96HD9 319 aa11.23□□□□□ -0.61
ATRX-217ENST00000624668 NARS2Q96I59 477 aaKnown RBP11.23□□□□□ -0.61
ATRX-217ENST00000624668 HRH4Q9H3N8 390 aa11.23□□□□□ -0.61
ATRX-217ENST00000624668 CCDC59Q9P031 241 aaKnown RBP11.23□□□□□ -0.61
ATRX-217ENST00000624668 HELTA6NFD8 242 aa11.22□□□□□ -0.61
ATRX-217ENST00000624668 BUB3O43684 328 aa11.22□□□□□ -0.61
ATRX-217ENST00000624668 GSTZ1O43708 216 aaPredicted RBP11.22□□□□□ -0.61
ATRX-217ENST00000624668 TOMM40O96008 361 aa11.22□□□□□ -0.61
ATRX-217ENST00000624668 MIFP14174 115 aa11.22□□□□□ -0.61
ATRX-217ENST00000624668 Q6ZTC4 211 aa11.22□□□□□ -0.61
ATRX-217ENST00000624668 LYZL2Q7Z4W2 148 aa11.22□□□□□ -0.61
ATRX-217ENST00000624668 SOSTQ9BQB4 213 aa11.22□□□□□ -0.61
ATRX-217ENST00000624668 RBKSQ9H477 322 aa11.22□□□□□ -0.61
ATRX-217ENST00000624668 HSPB7Q9UBY9 170 aa11.22□□□□□ -0.61
ATRX-217ENST00000624668 CELA1Q9UNI1 258 aa11.22□□□□□ -0.61
ATRX-217ENST00000624668 IGLL5B9A064 214 aa11.21□□□□□ -0.61
ATRX-217ENST00000624668 RD3LP0DJH9 198 aa11.21□□□□□ -0.61
ATRX-217ENST00000624668 PSG1P11464 419 aa11.21□□□□□ -0.61
ATRX-217ENST00000624668 TMEM41BQ5BJD5 291 aa11.21□□□□□ -0.61
ATRX-217ENST00000624668 OR51G1Q8NGK1 321 aa11.21□□□□□ -0.61
ATRX-217ENST00000624668 SLIRPQ9GZT3 109 aaKnown RBP11.21□□□□□ -0.61
ATRX-217ENST00000624668 NRN1Q9NPD7 142 aa11.21□□□□□ -0.61
ATRX-217ENST00000624668 TBC1D24Q9ULP9 559 aa11.21□□□□□ -0.61
ATRX-217ENST00000624668 IGKV1D-37A0A075B6S9 117 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms