RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 STUMQ69YW2 141 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 HCP5Q6MZN7 132 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 SEM1Q6ZVN7 128 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 RNF7Q9UBF6 113 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 SVEP1Q4LDE5 3571 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 RBX1P62877 108 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 ZNF474Q6S9Z5 364 aaPredicted RBP12.78□□□□□ -0.36
NPHP4-211ENST00000622020 ASCL2Q99929 193 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 DSCAML1Q8TD84 2053 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 VWC2LB2RUY7 222 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 LHBP01229 141 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 RNF151Q2KHN1 245 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 DEFB109BQ30KR1 87 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 C10orf113Q5VZT2 155 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 ARL6IP6Q8N6S5 226 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 H1FXQ92522 213 aaKnown RBP12.78□□□□□ -0.36
NPHP4-211ENST00000622020 GAFA1Q96PS6 74 aa12.78□□□□□ -0.36
NPHP4-211ENST00000622020 A0A1W2PRE2 83 aa12.77□□□□□ -0.36
NPHP4-211ENST00000622020 FAM27E3Q08E93 113 aa12.77□□□□□ -0.36
NPHP4-211ENST00000622020 PATE2Q6UY27 113 aa12.77□□□□□ -0.36
NPHP4-211ENST00000622020 RBMXL3Q8N7X1 1067 aaKnown RBP12.77□□□□□ -0.36
NPHP4-211ENST00000622020 RIF1Q5UIP0 2472 aaKnown RBP12.77□□□□□ -0.37
NPHP4-211ENST00000622020 CEACAM8P31997 349 aaPredicted RBP12.77□□□□□ -0.37
NPHP4-211ENST00000622020 WT1-ASQ06250 92 aa12.77□□□□□ -0.37
NPHP4-211ENST00000622020 ZNF841Q6ZN19 808 aa12.77□□□□□ -0.37
NPHP4-211ENST00000622020 SPATA12Q7Z6I5 190 aa12.77□□□□□ -0.37
NPHP4-211ENST00000622020 C1orf162Q8NEQ5 155 aaPredicted RBP12.77□□□□□ -0.37
NPHP4-211ENST00000622020 OR1B1Q8NGR6 318 aa12.77□□□□□ -0.37
NPHP4-211ENST00000622020 C19orf67A6NJJ6 358 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 ZNF883P0CG24 379 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 ERHP84090 104 aaKnown RBP12.76□□□□□ -0.37
NPHP4-211ENST00000622020 TBR1Q16650 682 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 LINC00305Q7Z4B0 112 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 MRPL52Q86TS9 123 aaKnown RBP12.76□□□□□ -0.37
NPHP4-211ENST00000622020 GSX1Q9H4S2 264 aaPredicted RBP12.76□□□□□ -0.37
NPHP4-211ENST00000622020 TPSG1Q9NRR2 321 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 RELNP78509 3460 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 PEX7O00628 323 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 IGHV1-46P01743 117 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 ZNF138P52744 262 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 C2orf83Q53S99 150 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 OR5B3Q8NH48 314 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 OR8B2Q96RD0 313 aa12.76□□□□□ -0.37
NPHP4-211ENST00000622020 ENSAO43768 121 aaKnown RBP12.75□□□□□ -0.37
NPHP4-211ENST00000622020 SLC25A5P05141 298 aaKnown RBP12.75□□□□□ -0.37
NPHP4-211ENST00000622020 SP9P0CG40 484 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 TSPOP30536 169 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 UBE2G1P62253 170 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 LINC00173Q6ZV60 143 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 ADTRPQ96IZ2 230 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 RITA1Q96K30 269 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 SAP30LQ9HAJ7 183 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 PGPA6NDG6 321 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 FAM181BA6NEQ2 426 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 IGLL1P15814 213 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 LINC00322Q6ZN03 302 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-211ENST00000622020 SLC25A48Q6ZT89 311 aaKnown RBP12.75□□□□□ -0.37
NPHP4-211ENST00000622020 ZNF329Q86UD4 541 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 TNFRSF19Q9NS68 423 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 RPUSD1Q9UJJ7 312 aaKnown RBP12.75□□□□□ -0.37
NPHP4-211ENST00000622020 RAI1Q7Z5J4 1906 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-211ENST00000622020 Q71RC1 249 aaPredicted RBP12.75□□□□□ -0.37
NPHP4-211ENST00000622020 C22orf15Q8WYQ4 148 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 ZNF257Q9Y2Q1 563 aa12.75□□□□□ -0.37
NPHP4-211ENST00000622020 ACACAQ13085 2346 aa12.74□□□□□ -0.37
NPHP4-211ENST00000622020 GLRXP35754 106 aa12.74□□□□□ -0.37
NPHP4-211ENST00000622020 SELENOVP59797 346 aa12.74□□□□□ -0.37
NPHP4-211ENST00000622020 COTL1Q14019 142 aa12.74□□□□□ -0.37
NPHP4-211ENST00000622020 FLYWCH2Q96CP2 140 aaKnown RBP12.74□□□□□ -0.37
NPHP4-211ENST00000622020 PGLYRP4Q96LB8 373 aa12.74□□□□□ -0.37
NPHP4-211ENST00000622020 SLC25A17O43808 307 aa12.74□□□□□ -0.37
NPHP4-211ENST00000622020 PMCHL2Q9BQD1 86 aa12.74□□□□□ -0.37
NPHP4-211ENST00000622020 TRAV17A0A0B4J275 112 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 DLL1O00548 723 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 DEFB123Q8N688 67 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.73□□□□□ -0.37
NPHP4-211ENST00000622020 OR10X1Q8NGY0 326 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 NDUFA4L2Q9NRX3 87 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 TRAV8-1A0A0A6YYK1 113 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 SPAARA0A1B0GVQ0 90 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 APOA2P02652 100 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 CFHR2P36980 270 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 KLHDC1Q8N7A1 406 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 OR1L8Q8NGR8 309 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 ARL2-SNX15V9GYD0 113 aa12.73□□□□□ -0.37
NPHP4-211ENST00000622020 PSMB11A5LHX3 300 aa12.72□□□□□ -0.37
NPHP4-211ENST00000622020 CSN3P07498 182 aa12.72□□□□□ -0.37
NPHP4-211ENST00000622020 ALKBH7Q9BT30 221 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-211ENST00000622020 SH3BGRL2Q9UJC5 107 aa12.72□□□□□ -0.37
NPHP4-211ENST00000622020 hDV102S1A0JD36 115 aa12.72□□□□□ -0.37
NPHP4-211ENST00000622020 CCL17Q92583 94 aa12.72□□□□□ -0.37
NPHP4-211ENST00000622020 ZNF430Q9H8G1 570 aaPredicted RBP12.72□□□□□ -0.37
NPHP4-211ENST00000622020 ZNF835Q9Y2P0 537 aa12.72□□□□□ -0.37
NPHP4-211ENST00000622020 POU2AF1Q16633 256 aa12.72□□□□□ -0.37
NPHP4-211ENST00000622020 ZNF788Q6ZQV5 615 aa12.72□□□□□ -0.37
NPHP4-211ENST00000622020 FXYD5Q96DB9 178 aa12.72□□□□□ -0.37
NPHP4-211ENST00000622020 RNF24Q9Y225 148 aa12.72□□□□□ -0.37
NPHP4-211ENST00000622020 CGB1A6NKQ9 187 aa12.71□□□□□ -0.37
NPHP4-211ENST00000622020 H0YJW9 148 aa12.71□□□□□ -0.37
NPHP4-211ENST00000622020 FAM87AP0C7U9 286 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms