RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 U3KQE9 123 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 X6R8D5 127 aa15.06■□□□□ 0
TRAPPC3-208ENST00000616074 RPS10-NUDT3A0A1W2PQS6 291 aa15.05■□□□□ -0
TRAPPC3-208ENST00000616074 IGLC1P0CG04 106 aa15.05■□□□□ -0
TRAPPC3-208ENST00000616074 HLA-DMBP28068 263 aa15.05■□□□□ -0
TRAPPC3-208ENST00000616074 RND2P52198 227 aa15.05■□□□□ -0
TRAPPC3-208ENST00000616074 PRSS54Q6PEW0 395 aa15.05■□□□□ -0
TRAPPC3-208ENST00000616074 OR1S2Q8NGQ3 325 aa15.05■□□□□ -0
TRAPPC3-208ENST00000616074 GLYATL2Q8WU03 294 aa15.05■□□□□ -0
TRAPPC3-208ENST00000616074 RTBDNQ9BSG5 229 aaPredicted RBP15.05■□□□□ -0
TRAPPC3-208ENST00000616074 HEYLQ9NQ87 328 aaPredicted RBP15.05■□□□□ -0
TRAPPC3-208ENST00000616074 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.05■□□□□ -0
TRAPPC3-208ENST00000616074 DNAH2Q9P225 4427 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 ELOA3CA0A087WX78 387 aaPredicted RBP15.04■□□□□ -0
TRAPPC3-208ENST00000616074 HNRNPCP07910 306 aaKnown RBP eCLIP15.04■□□□□ -0
TRAPPC3-208ENST00000616074 DHRS2Q13268 280 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 C2orf83Q53S99 150 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 C16orf54Q6UWD8 224 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 Q6ZTC4 211 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 SELENOHQ8IZQ5 122 aaKnown RBP15.04■□□□□ -0
TRAPPC3-208ENST00000616074 CSNK1G2-AS1Q8NCQ2 148 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 C15orf40Q8WUR7 153 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 GLMPQ8WWB7 406 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 RBPMSQ93062 196 aaKnown RBP15.04■□□□□ -0
TRAPPC3-208ENST00000616074 MIXL1Q9H2W2 232 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 NAA60Q9H7X0 242 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 CACNG5Q9UF02 275 aa15.04■□□□□ -0
TRAPPC3-208ENST00000616074 C14orf166Q9Y224 244 aaKnown RBP15.04■□□□□ -0
TRAPPC3-208ENST00000616074 KIAA1109Q2LD37 5005 aa15.03■□□□□ -0
TRAPPC3-208ENST00000616074 TEX13DA0A0J9YY54 714 aaPredicted RBP15.03■□□□□ -0
TRAPPC3-208ENST00000616074 HELTA6NFD8 242 aa15.03■□□□□ -0
TRAPPC3-208ENST00000616074 GABARAPH6UMI1 98 aa15.03■□□□□ -0
TRAPPC3-208ENST00000616074 OR10J1P30954 320 aa15.03■□□□□ -0
TRAPPC3-208ENST00000616074 PSMG4Q5JS54 123 aa15.03■□□□□ -0
TRAPPC3-208ENST00000616074 SLC24A4Q8NFF2 622 aa15.03■□□□□ -0
TRAPPC3-208ENST00000616074 Q8WTZ3 238 aa15.03■□□□□ -0
TRAPPC3-208ENST00000616074 TMEM170AQ8WVE7 144 aa15.03■□□□□ -0
TRAPPC3-208ENST00000616074 GPR146Q96CH1 333 aa15.03■□□□□ -0
TRAPPC3-208ENST00000616074 SMIM18P0DKX4 95 aa15.02■□□□□ -0
TRAPPC3-208ENST00000616074 SLC25A4P12235 298 aa15.02■□□□□ -0
TRAPPC3-208ENST00000616074 EIF2B2P49770 351 aaKnown RBP15.02■□□□□ -0
TRAPPC3-208ENST00000616074 YPEL3P61236 119 aaPredicted RBP15.02■□□□□ -0
TRAPPC3-208ENST00000616074 DHODHQ02127 395 aa15.02■□□□□ -0
TRAPPC3-208ENST00000616074 USF2Q15853 346 aaPredicted RBP15.02■□□□□ -0
TRAPPC3-208ENST00000616074 RNASEH2CQ8TDP1 164 aaKnown RBP15.02■□□□□ -0
TRAPPC3-208ENST00000616074 RAB40CQ96S21 281 aa15.02■□□□□ -0
TRAPPC3-208ENST00000616074 TBC1D24Q9ULP9 559 aa15.02■□□□□ -0
TRAPPC3-208ENST00000616074 FAT2Q9NYQ8 4349 aa15.02□□□□□ -0.01
TRAPPC3-208ENST00000616074 TRAV10A0A0B4J240 114 aa15.01□□□□□ -0.01
TRAPPC3-208ENST00000616074 CEBPZOSA8MTT3 80 aa15.01□□□□□ -0.01
TRAPPC3-208ENST00000616074 IL4P05112 153 aa15.01□□□□□ -0.01
TRAPPC3-208ENST00000616074 SSBP1Q04837 148 aaKnown RBP15.01□□□□□ -0.01
TRAPPC3-208ENST00000616074 MEF2DQ14814 521 aa15.01□□□□□ -0.01
TRAPPC3-208ENST00000616074 GPR107Q5VW38 600 aa15.01□□□□□ -0.01
TRAPPC3-208ENST00000616074 TMEM268Q5VZI3 342 aa15.01□□□□□ -0.01
TRAPPC3-208ENST00000616074 IGHV4-4A0A075B6R2 117 aa15□□□□□ -0.01
TRAPPC3-208ENST00000616074 CRYM-AS1A6NIL9 109 aa15□□□□□ -0.01
TRAPPC3-208ENST00000616074 NXPH3O95157 252 aa15□□□□□ -0.01
TRAPPC3-208ENST00000616074 AP2S1P53680 142 aaPredicted RBP15□□□□□ -0.01
TRAPPC3-208ENST00000616074 SURF2Q15527 256 aaPredicted RBP15□□□□□ -0.01
TRAPPC3-208ENST00000616074 CELA1Q9UNI1 258 aa15□□□□□ -0.01
TRAPPC3-208ENST00000616074 GPR132Q9UNW8 380 aa15□□□□□ -0.01
TRAPPC3-208ENST00000616074 DNAH17Q9UFH2 4485 aa15□□□□□ -0.01
TRAPPC3-208ENST00000616074 DISC1C4P0D8 188 aa14.99□□□□□ -0.01
TRAPPC3-208ENST00000616074 FAM90A26D6RGX4 464 aa14.99□□□□□ -0.01
TRAPPC3-208ENST00000616074 RGS5O15539 181 aa14.99□□□□□ -0.01
TRAPPC3-208ENST00000616074 MRPS10P82664 201 aaKnown RBP14.99□□□□□ -0.01
TRAPPC3-208ENST00000616074 OR4C16Q8NGL9 310 aa14.99□□□□□ -0.01
TRAPPC3-208ENST00000616074 NPIPB3Q92617 1050 aa14.99□□□□□ -0.01
TRAPPC3-208ENST00000616074 CTDSP2O14595 271 aa14.98□□□□□ -0.01
TRAPPC3-208ENST00000616074 TOMM40O96008 361 aa14.98□□□□□ -0.01
TRAPPC3-208ENST00000616074 NPY1RP25929 384 aa14.98□□□□□ -0.01
TRAPPC3-208ENST00000616074 ETFRF1Q6IPR1 90 aa14.98□□□□□ -0.01
TRAPPC3-208ENST00000616074 SMIM4Q8WVI0 70 aa14.98□□□□□ -0.01
TRAPPC3-208ENST00000616074 ACY3Q96HD9 319 aa14.98□□□□□ -0.01
TRAPPC3-208ENST00000616074 NRN1Q9NPD7 142 aa14.98□□□□□ -0.01
TRAPPC3-208ENST00000616074 TMEM56-RWDD3S4R434 201 aa14.98□□□□□ -0.01
TRAPPC3-208ENST00000616074 BUB3O43684 328 aa14.97□□□□□ -0.01
TRAPPC3-208ENST00000616074 AKAIN1P0CW23 69 aa14.97□□□□□ -0.01
TRAPPC3-208ENST00000616074 SNRPD3P62318 126 aaKnown RBP14.97□□□□□ -0.01
TRAPPC3-208ENST00000616074 SIGLEC15Q6ZMC9 328 aa14.97□□□□□ -0.01
TRAPPC3-208ENST00000616074 ZNF767PQ75MW2 155 aa14.97□□□□□ -0.01
TRAPPC3-208ENST00000616074 CENPSQ8N2Z9 138 aa14.97□□□□□ -0.01
TRAPPC3-208ENST00000616074 PRR13Q9NZ81 148 aa14.97□□□□□ -0.01
TRAPPC3-208ENST00000616074 PCLOQ9Y6V0 5065 aa14.96□□□□□ -0.01
TRAPPC3-208ENST00000616074 RD3LP0DJH9 198 aa14.96□□□□□ -0.01
TRAPPC3-208ENST00000616074 SULT1A3P0DMM9 295 aa14.96□□□□□ -0.01
TRAPPC3-208ENST00000616074 SULT1A4P0DMN0 295 aa14.96□□□□□ -0.01
TRAPPC3-208ENST00000616074 C12orf74Q32Q52 190 aa14.96□□□□□ -0.01
TRAPPC3-208ENST00000616074 NMSQ5H8A3 153 aa14.96□□□□□ -0.01
TRAPPC3-208ENST00000616074 SEPSECSQ9HD40 501 aaKnown RBP14.96□□□□□ -0.01
TRAPPC3-208ENST00000616074 XCL2Q9UBD3 114 aa14.96□□□□□ -0.01
TRAPPC3-208ENST00000616074 H3BMM0 161 aa14.95□□□□□ -0.02
TRAPPC3-208ENST00000616074 PSG1P11464 419 aa14.95□□□□□ -0.02
TRAPPC3-208ENST00000616074 NUTF2P61970 127 aaKnown RBP14.95□□□□□ -0.02
TRAPPC3-208ENST00000616074 SPCS2Q15005 226 aa14.95□□□□□ -0.02
TRAPPC3-208ENST00000616074 OR51S1Q8NGJ8 323 aa14.95□□□□□ -0.02
TRAPPC3-208ENST00000616074 PRRT1Q99946 306 aa14.95□□□□□ -0.02
TRAPPC3-208ENST00000616074 RNF126Q9BV68 326 aa14.95□□□□□ -0.02
TRAPPC3-208ENST00000616074 C1QTNF4Q9BXJ3 329 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms