RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 MSRB2Q9Y3D2 182 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 TANC2Q9HCD6 1990 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 CDC42EP2O14613 210 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 IL17DQ8TAD2 202 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 A8MWV9 139 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 SAXO1Q8IYX7 474 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 CADM3Q8N126 398 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 ST6GALNAC6Q969X2 333 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 GAGE12JA6NER3 117 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 HMSDA8MTL9 139 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 GAGE1Q13065 139 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 GAGE4Q13068 117 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 GAGE5Q13069 117 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 GAGE13Q4V321 117 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 PLEKHB2Q96CS7 222 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 CLDN16Q9Y5I7 305 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 IGFBP2P18065 325 aa10.56□□□□□ -0.72
TCF4-248ENST00000616053 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.55□□□□□ -0.72
TCF4-248ENST00000616053 MYMXA0A1B0GTQ4 84 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 HAMPP81172 84 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 DEFB131AP59861 70 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 LINC01619G3V211 115 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 CGAP01215 116 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 MST1LQ2TV78 715 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 C1orf43Q9BWL3 253 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 MBNL3Q9NUK0 354 aaKnown RBP10.55□□□□□ -0.72
TCF4-248ENST00000616053 SSC5DA1L4H1 1573 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 ANKRD39Q53RE8 183 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 MPTX1A8MV57 137 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 ZCCHC24Q8N2G6 241 aaKnown RBP10.55□□□□□ -0.72
TCF4-248ENST00000616053 DERL1Q9BUN8 251 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 ZIC1Q15915 447 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 OCIAD2Q56VL3 154 aa10.55□□□□□ -0.72
TCF4-248ENST00000616053 KLK8O60259 260 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 CELA3AP09093 270 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 NDPQ00604 133 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 TRAV8-3A0A0A6YYJ7 113 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 GCM2O75603 506 aaPredicted RBP10.54□□□□□ -0.72
TCF4-248ENST00000616053 GAS1P54826 345 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 PAX9P55771 341 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 ZNF672Q499Z4 452 aaPredicted RBP10.54□□□□□ -0.72
TCF4-248ENST00000616053 GAGE12BA1L429 117 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 F6UB75 175 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 GAGE7O76087 117 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 NXPH4O95158 308 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 ZNF883P0CG24 379 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 GAGE12FP0CL80 117 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 GAGE12GP0CL81 117 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 GAGE12IP0CL82 117 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 EIF4EBP2Q13542 120 aaPredicted RBP10.54□□□□□ -0.72
TCF4-248ENST00000616053 A0A1W2PPI3 338 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 DPRXA6NFQ7 191 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 SCN4AP35499 1836 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 A0A1B0GVG6 124 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 F2Z2F3 143 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 UBE2E1P51965 193 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 USMG5Q96IX5 58 aa10.54□□□□□ -0.72
TCF4-248ENST00000616053 LINC01549A6NIU2 74 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 C9orf153Q5TBE3 101 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 V9GYH0 126 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 TRBV7-1A0A0A6YYK4 115 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 IGKV1D-12P01611 117 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 IGLV2-23P01705 113 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 RNF183Q96D59 192 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 WDYHV1Q96HA8 205 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 TDRD15B5MCY1 1934 aaKnown RBP10.53□□□□□ -0.72
TCF4-248ENST00000616053 ANKRD36CQ5JPF3 1778 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 FOXS1O43638 330 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 EFNA2O43921 213 aa10.53□□□□□ -0.72
TCF4-248ENST00000616053 ZNF250P15622 560 aa10.52□□□□□ -0.72
TCF4-248ENST00000616053 KLHDC2Q9Y2U9 406 aa10.52□□□□□ -0.72
TCF4-248ENST00000616053 PLCE1Q9P212 2302 aa10.52□□□□□ -0.72
TCF4-248ENST00000616053 ZNF98A6NK75 572 aa10.52□□□□□ -0.72
TCF4-248ENST00000616053 SOCS3O14543 225 aa10.52□□□□□ -0.72
TCF4-248ENST00000616053 IGFBP6P24592 240 aaPredicted RBP10.52□□□□□ -0.72
TCF4-248ENST00000616053 CLPSL2Q6UWE3 100 aa10.52□□□□□ -0.72
TCF4-248ENST00000616053 ETDCA0A1B0GVM5 59 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 RHODO00212 210 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 KLRD1Q13241 179 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 CR1LQ2VPA4 569 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 C2orf82Q6UX34 121 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 A0A1W2PQF6 199 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 C9orf106Q8NAJ2 232 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 SLC25A39Q9BZJ4 359 aaPredicted RBP10.52□□□□□ -0.73
TCF4-248ENST00000616053 PEBP1P30086 187 aaKnown RBP10.52□□□□□ -0.73
TCF4-248ENST00000616053 CBLN2Q8IUK8 224 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 PILRAQ9UKJ1 303 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 ARFGEF2Q9Y6D5 1785 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 IRF3Q14653 427 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 ANK1P16157 1881 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 AZU1P20160 251 aa10.52□□□□□ -0.73
TCF4-248ENST00000616053 RPL15P61313 204 aaKnown RBP10.52□□□□□ -0.73
TCF4-248ENST00000616053 TRAV8-1A0A0A6YYK1 113 aa10.51□□□□□ -0.73
TCF4-248ENST00000616053 GAGE2BQ13066 116 aa10.51□□□□□ -0.73
TCF4-248ENST00000616053 LAGE3Q14657 143 aa10.51□□□□□ -0.73
TCF4-248ENST00000616053 SLC22A18ASQ8N1D0 253 aa10.51□□□□□ -0.73
TCF4-248ENST00000616053 MED13Q9UHV7 2174 aa10.51□□□□□ -0.73
TCF4-248ENST00000616053 Q8NFD4 153 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms