RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 THBDP07204 575 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 PLNP26678 52 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 FAM71F2Q6NXP2 309 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 SLC25A48Q6ZT89 311 aaKnown RBP3.81□□□□□ -1.8
CHD9-221ENST00000615216 PLPPR1Q8TBJ4 325 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 TNRC6AQ8NDV7 1962 aaKnown RBP3.81□□□□□ -1.8
CHD9-221ENST00000615216 FOXA3P55318 350 aaPredicted RBP3.81□□□□□ -1.8
CHD9-221ENST00000615216 ERVK11-1P61568 191 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 SIGLEC15Q6ZMC9 328 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 C14orf144Q96I85 54 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 TRGV9Q99603 122 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 RNF5Q99942 180 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 IGKV3OR2-268A0A0C4DH90 116 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 ZNHIT1O43257 154 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 DUTP33316 252 aaKnown RBP3.81□□□□□ -1.8
CHD9-221ENST00000615216 LY6G6FQ5SQ64 297 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 C9orf106Q8NAJ2 232 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 AKIRIN1Q9H9L7 192 aaPredicted RBP3.81□□□□□ -1.8
CHD9-221ENST00000615216 CHTOPQ9Y3Y2 248 aaKnown RBP3.81□□□□□ -1.8
CHD9-221ENST00000615216 LY96Q9Y6Y9 160 aa3.81□□□□□ -1.8
CHD9-221ENST00000615216 ZNF106Q9H2Y7 1883 aaKnown RBP3.8□□□□□ -1.8
CHD9-221ENST00000615216 STHQ8IWL8 128 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 OOSP1A8MZH6 123 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 IGKCP01834 107 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 NDUFAF3Q9BU61 184 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 PRSS22Q9GZN4 317 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 HSD52Q0P140 79 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 EFNB3Q15768 340 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 TRBV6-6A0A0A6YYG2 114 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 IGHV3-66A0A0C4DH42 116 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 CA1P00915 261 aaPredicted RBP3.8□□□□□ -1.8
CHD9-221ENST00000615216 IGKV3-20P01619 116 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 CD7P09564 240 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 TDGF1P13385 188 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 HEPN1Q6WQI6 88 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 OR9G4Q8NGQ1 327 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 RNASE7Q9H1E1 156 aaKnown RBP3.8□□□□□ -1.8
CHD9-221ENST00000615216 TRBV7-1A0A0A6YYK4 115 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 PHLDA1Q8WV24 401 aaPredicted RBP3.8□□□□□ -1.8
CHD9-221ENST00000615216 COQ2Q96H96 371 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 LAMTOR2Q9Y2Q5 125 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 FNDC10F2Z333 226 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 GNG5P63218 68 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 SLC25A39Q9BZJ4 359 aaPredicted RBP3.8□□□□□ -1.8
CHD9-221ENST00000615216 CRYGSP22914 178 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 MINOS1Q5TGZ0 78 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 SPSB3Q6PJ21 355 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 GTSCR1Q86UQ5 136 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 KIR3DL3Q8N743 410 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 SRSF8Q9BRL6 282 aaKnown RBP3.8□□□□□ -1.8
CHD9-221ENST00000615216 SEPSECSQ9HD40 501 aaKnown RBP3.8□□□□□ -1.8
CHD9-221ENST00000615216 MINOS1-NBL1R4GNA1 71 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 CEP192Q8TEP8 1941 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 IGHV3OR16-10A0A075B7F0 116 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 A0A0A6YYD4 124 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 LINC00587B1AMM8 73 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 HOXA3O43365 443 aaPredicted RBP3.8□□□□□ -1.8
CHD9-221ENST00000615216 LINC00614P0C842 121 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 FAM27E3Q08E93 113 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 FOXL1Q12952 345 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 ZNF585BQ52M93 769 aa3.8□□□□□ -1.8
CHD9-221ENST00000615216 MBNL3Q9NUK0 354 aaKnown RBP3.8□□□□□ -1.8
CHD9-221ENST00000615216 IGKV1D-13A0A0B4J2D9 117 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 TMEM238C9JI98 176 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST1H2BKO60814 126 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST1H2BJP06899 126 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 IGKV1-13P0DP09 117 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST1H2BOP23527 126 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST1H2BBP33778 126 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST1H2BDP58876 126 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST1H2BCP62807 126 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST2H2BEQ16778 126 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 ACTL10Q5JWF8 245 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.79□□□□□ -1.8
CHD9-221ENST00000615216 DMRTA1Q5VZB9 504 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST1H2BHQ93079 126 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST1H2BNQ99877 126 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 HIST1H2BMQ99879 126 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 SPRR3Q9UBC9 169 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 TRGV2A0A075B6R0 118 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 EGR1P18146 543 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 ID3Q02535 119 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 DPH3Q96FX2 82 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 C7orf69Q9H7B7 122 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 TIMP3P35625 211 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 RHOGP84095 191 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 MORN3Q6PF18 240 aaPredicted RBP3.79□□□□□ -1.8
CHD9-221ENST00000615216 PSG8Q9UQ74 426 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 TRAV8-4A0A0B4J246 113 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 E9PLN8 166 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 WNT2P09544 360 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 CSRP1P21291 193 aaKnown RBP3.79□□□□□ -1.8
CHD9-221ENST00000615216 PCP4P48539 62 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 PAX2Q02962 417 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 FAM19A2Q8N3H0 131 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 VKORC1Q9BQB6 163 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 INTS1Q8N201 2190 aaKnown RBP3.79□□□□□ -1.8
CHD9-221ENST00000615216 IGHV1-18A0A0C4DH31 117 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 IGKV1-9A0A0C4DH69 117 aa3.79□□□□□ -1.8
CHD9-221ENST00000615216 M0R1W7 72 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms