RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 TIGITQ495A1 244 aa12.93□□□□□ -0.34
SSBP1-215ENST00000612337 MORN3Q6PF18 240 aaPredicted RBP12.93□□□□□ -0.34
SSBP1-215ENST00000612337 DCANP1Q8TF63 244 aa12.93□□□□□ -0.34
SSBP1-215ENST00000612337 GLYATL2Q8WU03 294 aa12.93□□□□□ -0.34
SSBP1-215ENST00000612337 DIRAS2Q96HU8 199 aa12.93□□□□□ -0.34
SSBP1-215ENST00000612337 HRH4Q9H3N8 390 aa12.93□□□□□ -0.34
SSBP1-215ENST00000612337 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.93□□□□□ -0.34
SSBP1-215ENST00000612337 RABL2AQ9UBK7 228 aaPredicted RBP12.93□□□□□ -0.34
SSBP1-215ENST00000612337 RABL2BQ9UNT1 228 aa12.93□□□□□ -0.34
SSBP1-215ENST00000612337 ZNF688P0C7X2 276 aa12.92□□□□□ -0.34
SSBP1-215ENST00000612337 OR1S2Q8NGQ3 325 aa12.92□□□□□ -0.34
SSBP1-215ENST00000612337 LHFPL5Q8TAF8 219 aa12.92□□□□□ -0.34
SSBP1-215ENST00000612337 SMIM4Q8WVI0 70 aa12.92□□□□□ -0.34
SSBP1-215ENST00000612337 RBPMSQ93062 196 aaKnown RBP12.92□□□□□ -0.34
SSBP1-215ENST00000612337 RTBDNQ9BSG5 229 aaPredicted RBP12.92□□□□□ -0.34
SSBP1-215ENST00000612337 C14orf166Q9Y224 244 aaKnown RBP12.92□□□□□ -0.34
SSBP1-215ENST00000612337 U3KQE9 123 aa12.92□□□□□ -0.34
SSBP1-215ENST00000612337 FAT2Q9NYQ8 4349 aa12.92□□□□□ -0.34
SSBP1-215ENST00000612337 IGHV4-28A0A0C4DH34 117 aa12.91□□□□□ -0.34
SSBP1-215ENST00000612337 TEX13DA0A0J9YY54 714 aaPredicted RBP12.91□□□□□ -0.34
SSBP1-215ENST00000612337 ZNF705EA8MWA4 302 aaPredicted RBP12.91□□□□□ -0.34
SSBP1-215ENST00000612337 C11orf94C9JXX5 98 aa12.91□□□□□ -0.34
SSBP1-215ENST00000612337 H3BMQ9 156 aa12.91□□□□□ -0.34
SSBP1-215ENST00000612337 CTDSPLO15194 276 aa12.91□□□□□ -0.34
SSBP1-215ENST00000612337 IGLC1P0CG04 106 aa12.91□□□□□ -0.34
SSBP1-215ENST00000612337 EIF2B2P49770 351 aaKnown RBP12.91□□□□□ -0.34
SSBP1-215ENST00000612337 MEF2DQ14814 521 aa12.91□□□□□ -0.34
SSBP1-215ENST00000612337 C2orf83Q53S99 150 aa12.91□□□□□ -0.34
SSBP1-215ENST00000612337 PRSS54Q6PEW0 395 aa12.91□□□□□ -0.34
SSBP1-215ENST00000612337 SELENOHQ8IZQ5 122 aaKnown RBP12.91□□□□□ -0.34
SSBP1-215ENST00000612337 RNASEH2CQ8TDP1 164 aaKnown RBP12.91□□□□□ -0.34
SSBP1-215ENST00000612337 NAA60Q9H7X0 242 aa12.91□□□□□ -0.34
SSBP1-215ENST00000612337 HEYLQ9NQ87 328 aaPredicted RBP12.91□□□□□ -0.34
SSBP1-215ENST00000612337 DNAH17Q9UFH2 4485 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 HELTA6NFD8 242 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 KNCNA6PVL3 124 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 NOL3O60936 208 aaKnown RBP12.9□□□□□ -0.34
SSBP1-215ENST00000612337 RBMY1A1P0DJD3 496 aaKnown RBP12.9□□□□□ -0.34
SSBP1-215ENST00000612337 RBMY1CP0DJD4 496 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 SLC25A4P12235 298 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 MIFP14174 115 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 C4BPBP20851 252 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 RND2P52198 227 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 DHODHQ02127 395 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 IL18Q14116 193 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 RBMY1FQ15415 496 aaKnown RBP12.9□□□□□ -0.34
SSBP1-215ENST00000612337 SURF2Q15527 256 aaPredicted RBP12.9□□□□□ -0.34
SSBP1-215ENST00000612337 FAAP20Q6NZ36 180 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 Q8WTZ3 238 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
SSBP1-215ENST00000612337 CACNG5Q9UF02 275 aa12.9□□□□□ -0.34
SSBP1-215ENST00000612337 IGLL5B9A064 214 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 DISC1C4P0D8 188 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 HNRNPCP07910 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
SSBP1-215ENST00000612337 OR10J1P30954 320 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 AP2S1P53680 142 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-215ENST00000612337 YPEL3P61236 119 aaPredicted RBP12.89□□□□□ -0.35
SSBP1-215ENST00000612337 PRR20EP86478 221 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 PRR20CP86479 221 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 PRR20DP86480 221 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 PRR20BP86481 221 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 PRR20AP86496 221 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 DHRS2Q13268 280 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 ACTL10Q5JWF8 245 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 C16orf54Q6UWD8 224 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 SLC24A4Q8NFF2 622 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 GLMPQ8WWB7 406 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 GPR146Q96CH1 333 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 APLNQ9ULZ1 77 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 X6R8D5 127 aa12.89□□□□□ -0.35
SSBP1-215ENST00000612337 CRYM-AS1A6NIL9 109 aa12.88□□□□□ -0.35
SSBP1-215ENST00000612337 CEBPZOSA8MTT3 80 aa12.88□□□□□ -0.35
SSBP1-215ENST00000612337 AKAIN1P0CW23 69 aa12.88□□□□□ -0.35
SSBP1-215ENST00000612337 TMEM268Q5VZI3 342 aa12.88□□□□□ -0.35
SSBP1-215ENST00000612337 CSNK1G2-AS1Q8NCQ2 148 aa12.88□□□□□ -0.35
SSBP1-215ENST00000612337 TMEM170AQ8WVE7 144 aa12.88□□□□□ -0.35
SSBP1-215ENST00000612337 SOSTQ9BQB4 213 aa12.88□□□□□ -0.35
SSBP1-215ENST00000612337 GPR132Q9UNW8 380 aa12.88□□□□□ -0.35
SSBP1-215ENST00000612337 TMEM56-RWDD3S4R434 201 aa12.88□□□□□ -0.35
SSBP1-215ENST00000612337 GSTZ1O43708 216 aaPredicted RBP12.87□□□□□ -0.35
SSBP1-215ENST00000612337 HLA-DMBP28068 263 aa12.87□□□□□ -0.35
SSBP1-215ENST00000612337 TNFSF8P32971 234 aa12.87□□□□□ -0.35
SSBP1-215ENST00000612337 PSMG4Q5JS54 123 aa12.87□□□□□ -0.35
SSBP1-215ENST00000612337 ETFRF1Q6IPR1 90 aa12.87□□□□□ -0.35
SSBP1-215ENST00000612337 OR4C16Q8NGL9 310 aa12.87□□□□□ -0.35
SSBP1-215ENST00000612337 RAB40CQ96S21 281 aa12.87□□□□□ -0.35
SSBP1-215ENST00000612337 CACFD1Q9UGQ2 172 aa12.87□□□□□ -0.35
SSBP1-215ENST00000612337 RSL24D1Q9UHA3 163 aaKnown RBP12.87□□□□□ -0.35
SSBP1-215ENST00000612337 TBC1D24Q9ULP9 559 aa12.87□□□□□ -0.35
SSBP1-215ENST00000612337 ANKRD20A5PA0PJZ0 165 aa12.86□□□□□ -0.35
SSBP1-215ENST00000612337 IL4P05112 153 aa12.86□□□□□ -0.35
SSBP1-215ENST00000612337 USF2Q15853 346 aaPredicted RBP12.86□□□□□ -0.35
SSBP1-215ENST00000612337 NOXA1Q86UR1 476 aa12.86□□□□□ -0.35
SSBP1-215ENST00000612337 MCFD2Q8NI22 146 aa12.86□□□□□ -0.35
SSBP1-215ENST00000612337 PRRT1Q99946 306 aa12.86□□□□□ -0.35
SSBP1-215ENST00000612337 SEPSECSQ9HD40 501 aaKnown RBP12.86□□□□□ -0.35
SSBP1-215ENST00000612337 CLEC5AQ9NY25 188 aa12.86□□□□□ -0.35
SSBP1-215ENST00000612337 ELOA3CA0A087WX78 387 aaPredicted RBP12.85□□□□□ -0.35
SSBP1-215ENST00000612337 TRAV10A0A0B4J240 114 aa12.85□□□□□ -0.35
SSBP1-215ENST00000612337 TOMM40O96008 361 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms