RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 SNAPC5O75971 98 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 ATG12O94817 140 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 AKR1C4P17516 323 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 CCR6P51684 374 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 Q56UQ5 140 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 H2BFWTQ7Z2G1 175 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 TMED4Q7Z7H5 227 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 GBGT1Q8N5D6 347 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 GLYATL2Q8WU03 294 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 LSM10Q969L4 123 aaKnown RBP10.82□□□□□ -0.68
SSBP4-214ENST00000607020 TXN2Q99757 166 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 WDR12Q9GZL7 423 aaKnown RBP10.82□□□□□ -0.68
SSBP4-214ENST00000607020 PRNDQ9UKY0 176 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 NSG2Q9Y328 171 aa10.82□□□□□ -0.68
SSBP4-214ENST00000607020 ELOA3CA0A087WX78 387 aaPredicted RBP10.81□□□□□ -0.68
SSBP4-214ENST00000607020 IGHV3-21A0A0B4J1V1 117 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 CDS2O95674 445 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 IGKV1-5P01602 117 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 P0C879 139 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 BTCP35070 178 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 AKR1C2P52895 323 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 DEFB131AP59861 70 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 SUPT4H1P63272 117 aaKnown RBP10.81□□□□□ -0.68
SSBP4-214ENST00000607020 DHODHQ02127 395 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 ZNF846Q147U1 533 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 MORN3Q6PF18 240 aaPredicted RBP10.81□□□□□ -0.68
SSBP4-214ENST00000607020 Q6ZR54 194 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 TCF24Q7RTU0 167 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 UBAC2Q8NBM4 344 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 VSIRQ9H7M9 311 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 TMEM14BQ9NUH8 114 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 PLA2G2EQ9NZK7 142 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 KCNIP3Q9Y2W7 256 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 X6R8D5 127 aa10.81□□□□□ -0.68
SSBP4-214ENST00000607020 IGKV3-7A0A075B6H7 116 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 DEFB131BA0A096LNP1 70 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 IGHV3-49A0A0A0MS15 119 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 M0R2N4 97 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 PLA2G10O15496 165 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 NDUFB6O95139 128 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 SPP1P10451 314 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 TMEM128Q5BJH2 165 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 TRPT1Q86TN4 253 aaKnown RBP10.8□□□□□ -0.68
SSBP4-214ENST00000607020 STHQ8IWL8 128 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 DUSP18Q8NEJ0 188 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 OR1P1Q8NH06 330 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 LHFPL5Q8TAF8 219 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 RBPMSQ93062 196 aaKnown RBP10.8□□□□□ -0.68
SSBP4-214ENST00000607020 TMEM56Q96MV1 263 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 NDUFAF3Q9BU61 184 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 MS4A6AQ9H2W1 248 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 FKBP11Q9NYL4 201 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 OR51B2Q9Y5P1 312 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 TMEM56-RWDD3S4R434 201 aa10.8□□□□□ -0.68
SSBP4-214ENST00000607020 DBX1A6NMT0 343 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 LYRM1O43325 122 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 YIF1AO95070 293 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 ANXA3P12429 323 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 MFAP4P55083 255 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 IZUMO4Q1ZYL8 232 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 TMEM268Q5VZI3 342 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 LEMD1Q68G75 181 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 ZNF575Q86XF7 245 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 SELENOHQ8IZQ5 122 aaKnown RBP10.79□□□□□ -0.68
SSBP4-214ENST00000607020 OR4A16Q8NH70 328 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 IL22RA2Q969J5 263 aa10.79□□□□□ -0.68
SSBP4-214ENST00000607020 RRNAD1Q96FB5 475 aaKnown RBP10.79□□□□□ -0.68
SSBP4-214ENST00000607020 A0A0B4J293 547 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 A0A0G2JRQ6 117 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 I3L2K1 104 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 DNASE2O00115 360 aaPredicted RBP10.78□□□□□ -0.68
SSBP4-214ENST00000607020 CDK2AP2O75956 126 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 SRPXP78539 464 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 FAM219AQ8IW50 185 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 LILRB2Q8N423 598 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 CSNK1G2-AS1Q8NCQ2 148 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 RNASE11Q8TAA1 199 aaKnown RBP10.78□□□□□ -0.68
SSBP4-214ENST00000607020 GINS3Q9BRX5 216 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 HINT2Q9BX68 163 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 PRR13Q9NZ81 148 aa10.78□□□□□ -0.68
SSBP4-214ENST00000607020 IGHV3OR16-13A0A075B7E8 117 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 IGHV3-74A0A0B4J1X5 117 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 UPK1BO75841 260 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 VAMP1P23763 118 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 UBE2MP61081 183 aaKnown RBP10.77□□□□□ -0.69
SSBP4-214ENST00000607020 PPP1R1AQ13522 171 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 SOHLH1Q5JUK2 328 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 FAM24BQ8N5W8 94 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 SLC35G3Q8N808 338 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 ST8SIA2Q92186 375 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 GRAMD2BQ96HH9 432 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 TBC1D24Q9ULP9 559 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 FLVCR2Q9UPI3 526 aa10.77□□□□□ -0.69
SSBP4-214ENST00000607020 A0A0B4J2A0 478 aa10.76□□□□□ -0.69
SSBP4-214ENST00000607020 ST8SIA3O43173 380 aa10.76□□□□□ -0.69
SSBP4-214ENST00000607020 HSPE1P61604 102 aaKnown RBP10.76□□□□□ -0.69
SSBP4-214ENST00000607020 TOMM20LQ6UXN7 152 aa10.76□□□□□ -0.69
SSBP4-214ENST00000607020 LGI3Q8N145 548 aa10.76□□□□□ -0.69
SSBP4-214ENST00000607020 FAM210BQ96KR6 192 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms