RNA–Protein interactions for RNA: ENST00000602251.5

LTBP4-231, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 2

Gene LTBP4, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-231	ENST00000602251	WDR12	Q9GZL7	423 aa	Known RBP	13.68	□□□□□ -0.22
LTBP4-231	ENST00000602251	SELENOK	Q9Y6D0	94 aa		13.68	□□□□□ -0.22
LTBP4-231	ENST00000602251	RPS10-NUDT3	A0A1W2PQS6	291 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	NDUFA4	O00483	81 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	PLA2G10	O15496	165 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	YIF1A	O95070	293 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	IFNA10	P01566	189 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	CTSG	P08311	255 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	OR4E1	P0C645	316 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	FCGR2B	P31994	310 aa	Predicted RBP	13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	ELL	P55199	621 aa	Predicted RBP	13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	ZNF846	Q147U1	533 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	TM4SF20	Q53R12	229 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	UXS1	Q8NBZ7	420 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	OR52B4	Q8NGK2	314 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	DTD1	Q8TEA8	209 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	MARC2	Q969Z3	335 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	HSPB7	Q9UBY9	170 aa		13.67	□□□□□ -0.22
LTBP4-231	ENST00000602251	DNAH17	Q9UFH2	4485 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	TMEM213	A2RRL7	107 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251		F8W735	103 aa	Predicted RBP	13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	SLC25A6	P12236	298 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	ANXA7	P20073	488 aa	Known RBP	13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	ADM	P35318	185 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	BSX	Q3C1V8	233 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	C2orf83	Q53S99	150 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	MZT2B	Q6NZ67	158 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	TMEM61	Q8N0U2	210 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	CACNG8	Q8WXS5	425 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	TMEM190	Q8WZ59	177 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	RBKS	Q9H477	322 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	DAZ1	Q9NQZ3	744 aa	Known RBP	13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	MRPL27	Q9P0M9	148 aa	Known RBP	13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251		U3KQ87	197 aa		13.66	□□□□□ -0.22
LTBP4-231	ENST00000602251	MED6	O75586	246 aa		13.65	□□□□□ -0.22
LTBP4-231	ENST00000602251	IFNA21	P01568	189 aa		13.65	□□□□□ -0.22
LTBP4-231	ENST00000602251	TCRB	P04435	133 aa		13.65	□□□□□ -0.22
LTBP4-231	ENST00000602251	NPY1R	P25929	384 aa		13.65	□□□□□ -0.22
LTBP4-231	ENST00000602251	DHRS2	Q13268	280 aa		13.65	□□□□□ -0.22
LTBP4-231	ENST00000602251	DEFB135	Q30KP9	77 aa		13.65	□□□□□ -0.22
LTBP4-231	ENST00000602251	PVRIG	Q6DKI7	326 aa		13.65	□□□□□ -0.22
LTBP4-231	ENST00000602251	TMEM217	Q8N7C4	229 aa		13.65	□□□□□ -0.22
LTBP4-231	ENST00000602251	RNASEH2C	Q8TDP1	164 aa	Known RBP	13.65	□□□□□ -0.22
LTBP4-231	ENST00000602251	C20orf85	Q9H1P6	137 aa		13.65	□□□□□ -0.22
LTBP4-231	ENST00000602251	GGNBP1	Q5YKI7	109 aa		13.64	□□□□□ -0.23
LTBP4-231	ENST00000602251	ETFRF1	Q6IPR1	90 aa		13.64	□□□□□ -0.23
LTBP4-231	ENST00000602251	TRAV6	A0A075B6T7	132 aa		13.63	□□□□□ -0.23
LTBP4-231	ENST00000602251	IGHV3OR16-8	A0A075B7F1	116 aa		13.63	□□□□□ -0.23
LTBP4-231	ENST00000602251	FAM240B	A0A1B0GVZ2	78 aa		13.63	□□□□□ -0.23
LTBP4-231	ENST00000602251	FAM90A26	D6RGX4	464 aa		13.63	□□□□□ -0.23
LTBP4-231	ENST00000602251	APOC4	P55056	127 aa		13.63	□□□□□ -0.23
LTBP4-231	ENST00000602251	BTNL8	Q6UX41	500 aa		13.63	□□□□□ -0.23
LTBP4-231	ENST00000602251	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.63	□□□□□ -0.23
LTBP4-231	ENST00000602251	RNF183	Q96D59	192 aa		13.63	□□□□□ -0.23
LTBP4-231	ENST00000602251	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.63	□□□□□ -0.23
LTBP4-231	ENST00000602251	MLX	Q9UH92	298 aa		13.63	□□□□□ -0.23
LTBP4-231	ENST00000602251	DYNC1H1	Q14204	4646 aa	Known RBP	13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	TRAV30	A0A087WSZ9	112 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	C15orf62	A8K5M9	175 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251		K7EMT4	169 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	ZNF207	O43670	478 aa	Known RBP	13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	PITX3	O75364	302 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	CLN5	O75503	358 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	SCAF4	O95104	1147 aa	Known RBP	13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	TMEM50A	O95807	157 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	IFNA4	P05014	189 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	SLC25A4	P12235	298 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	ATP5I	P56385	69 aa	Predicted RBP	13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	MLANA	Q16655	118 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	OR4X1	Q8NH49	305 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	CIB3	Q96Q77	187 aa	Predicted RBP	13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	GINS3	Q9BRX5	216 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	NUDT15	Q9NV35	164 aa		13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	PAIP2B	Q9ULR5	123 aa	Known RBP	13.62	□□□□□ -0.23
LTBP4-231	ENST00000602251	PKD1	P98161	4303 aa		13.61	□□□□□ -0.23
LTBP4-231	ENST00000602251		A0A1B0GVY2	172 aa		13.61	□□□□□ -0.23
LTBP4-231	ENST00000602251	UBE2C	O00762	179 aa		13.61	□□□□□ -0.23
LTBP4-231	ENST00000602251	ADAP1	O75689	374 aa		13.61	□□□□□ -0.23
LTBP4-231	ENST00000602251	C8orf88	P0DMB2	117 aa		13.61	□□□□□ -0.23
LTBP4-231	ENST00000602251	IAPP	P10997	89 aa		13.61	□□□□□ -0.23
LTBP4-231	ENST00000602251	RPP30	P78346	268 aa	Known RBP	13.61	□□□□□ -0.23
LTBP4-231	ENST00000602251	ZNF600	Q6ZNG1	722 aa		13.61	□□□□□ -0.23
LTBP4-231	ENST00000602251	DNAH11	Q96DT5	4516 aa		13.61	□□□□□ -0.23
LTBP4-231	ENST00000602251	WRB	O00258	174 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	SYNGR2	O43760	224 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	UPK1B	O75841	260 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	H2AFB2	P0C5Z0	115 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	RND2	P52198	227 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	RAB11A	P62491	216 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	ASAH1	Q13510	395 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	LAMTOR1	Q6IAA8	161 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	LINC00336	Q6ZUF6	198 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	KRTAP4-5	Q9BYR2	181 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	MAGT1	Q9H0U3	335 aa		13.6	□□□□□ -0.23
LTBP4-231	ENST00000602251	TRAV14DV4	A0A0A6YYC5	116 aa		13.59	□□□□□ -0.23
LTBP4-231	ENST00000602251	TRAV25	A0A0B4J276	109 aa		13.59	□□□□□ -0.23
LTBP4-231	ENST00000602251	TMEM116	Q8NCL8	245 aa		13.59	□□□□□ -0.23
LTBP4-231	ENST00000602251	ENKUR	Q8TC29	256 aa		13.59	□□□□□ -0.23
LTBP4-231	ENST00000602251	MITD1	Q8WV92	249 aa		13.59	□□□□□ -0.23
LTBP4-231	ENST00000602251	MRPL36	Q9P0J6	103 aa	Known RBP	13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms