RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 RNASEH2CQ8TDP1 164 aaKnown RBP12.37□□□□□ -0.43
SCAF1-204ENST00000601038 C2CD4CQ8TF44 421 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 GPR146Q96CH1 333 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 CACNG5Q9UF02 275 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 GPR132Q9UNW8 380 aa12.37□□□□□ -0.43
SCAF1-204ENST00000601038 CTDSP2O14595 271 aa12.36□□□□□ -0.43
SCAF1-204ENST00000601038 ZNF688P0C7X2 276 aa12.36□□□□□ -0.43
SCAF1-204ENST00000601038 EIF2B2P49770 351 aaKnown RBP12.36□□□□□ -0.43
SCAF1-204ENST00000601038 RND2P52198 227 aa12.36□□□□□ -0.43
SCAF1-204ENST00000601038 YPEL3P61236 119 aaPredicted RBP12.36□□□□□ -0.43
SCAF1-204ENST00000601038 SLC24A4Q8NFF2 622 aa12.36□□□□□ -0.43
SCAF1-204ENST00000601038 Q8WTZ3 238 aa12.36□□□□□ -0.43
SCAF1-204ENST00000601038 SMIM4Q8WVI0 70 aa12.36□□□□□ -0.43
SCAF1-204ENST00000601038 HRH4Q9H3N8 390 aa12.36□□□□□ -0.43
SCAF1-204ENST00000601038 CACFD1Q9UGQ2 172 aa12.36□□□□□ -0.43
SCAF1-204ENST00000601038 HELTA6NFD8 242 aa12.35□□□□□ -0.43
SCAF1-204ENST00000601038 CRYM-AS1A6NIL9 109 aa12.35□□□□□ -0.43
SCAF1-204ENST00000601038 KNCNA6PVL3 124 aa12.35□□□□□ -0.43
SCAF1-204ENST00000601038 CEBPZOSA8MTT3 80 aa12.35□□□□□ -0.43
SCAF1-204ENST00000601038 AKAIN1P0CW23 69 aa12.35□□□□□ -0.43
SCAF1-204ENST00000601038 OR10J1P30954 320 aa12.35□□□□□ -0.43
SCAF1-204ENST00000601038 AP2S1P53680 142 aaPredicted RBP12.35□□□□□ -0.43
SCAF1-204ENST00000601038 TMEM268Q5VZI3 342 aa12.35□□□□□ -0.43
SCAF1-204ENST00000601038 ETFRF1Q6IPR1 90 aa12.35□□□□□ -0.43
SCAF1-204ENST00000601038 TMEM56-RWDD3S4R434 201 aa12.35□□□□□ -0.43
SCAF1-204ENST00000601038 C11orf94C9JXX5 98 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 CTDSPLO15194 276 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 HNRNPCP07910 306 aaKnown RBP eCLIP12.34□□□□□ -0.43
SCAF1-204ENST00000601038 RBMY1A1P0DJD3 496 aaKnown RBP12.34□□□□□ -0.43
SCAF1-204ENST00000601038 RBMY1CP0DJD4 496 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 MIFP14174 115 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 RBMY1FQ15415 496 aaKnown RBP12.34□□□□□ -0.43
SCAF1-204ENST00000601038 ACTL10Q5JWF8 245 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 C16orf54Q6UWD8 224 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 GPR141Q7Z602 305 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 NOXA1Q86UR1 476 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 OR4C16Q8NGL9 310 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 TMEM170AQ8WVE7 144 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 GLMPQ8WWB7 406 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 PRRT1Q99946 306 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 RABL2AQ9UBK7 228 aaPredicted RBP12.34□□□□□ -0.43
SCAF1-204ENST00000601038 RABL2BQ9UNT1 228 aa12.34□□□□□ -0.43
SCAF1-204ENST00000601038 IGHV4-28A0A0C4DH34 117 aa12.33□□□□□ -0.44
SCAF1-204ENST00000601038 ZNF705EA8MWA4 302 aaPredicted RBP12.33□□□□□ -0.44
SCAF1-204ENST00000601038 C4BPBP20851 252 aa12.33□□□□□ -0.44
SCAF1-204ENST00000601038 ALDH3B2P48448 385 aa12.33□□□□□ -0.44
SCAF1-204ENST00000601038 DHRS2Q13268 280 aa12.33□□□□□ -0.44
SCAF1-204ENST00000601038 SPCS2Q15005 226 aa12.33□□□□□ -0.44
SCAF1-204ENST00000601038 DIRAS2Q96HU8 199 aa12.33□□□□□ -0.44
SCAF1-204ENST00000601038 RAB40CQ96S21 281 aa12.33□□□□□ -0.44
SCAF1-204ENST00000601038 KCNIP3Q9Y2W7 256 aa12.33□□□□□ -0.44
SCAF1-204ENST00000601038 SULT1A3P0DMM9 295 aa12.32□□□□□ -0.44
SCAF1-204ENST00000601038 SULT1A4P0DMN0 295 aa12.32□□□□□ -0.44
SCAF1-204ENST00000601038 NPY1RP25929 384 aa12.32□□□□□ -0.44
SCAF1-204ENST00000601038 IL18Q14116 193 aa12.32□□□□□ -0.44
SCAF1-204ENST00000601038 NMSQ5H8A3 153 aa12.32□□□□□ -0.44
SCAF1-204ENST00000601038 CSNK1G2-AS1Q8NCQ2 148 aa12.32□□□□□ -0.44
SCAF1-204ENST00000601038 OR51S1Q8NGJ8 323 aa12.32□□□□□ -0.44
SCAF1-204ENST00000601038 NPIPB3Q92617 1050 aa12.32□□□□□ -0.44
SCAF1-204ENST00000601038 IL22RA2Q969J5 263 aa12.32□□□□□ -0.44
SCAF1-204ENST00000601038 MRPS26Q9BYN8 205 aaKnown RBP12.32□□□□□ -0.44
SCAF1-204ENST00000601038 X6R8D5 127 aa12.32□□□□□ -0.44
SCAF1-204ENST00000601038 IGLL5B9A064 214 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 NXPH3O95157 252 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 IL4P05112 153 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 RD3LP0DJH9 198 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 PRR20EP86478 221 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 PRR20CP86479 221 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 PRR20DP86480 221 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 PRR20BP86481 221 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 PRR20AP86496 221 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 USF2Q15853 346 aaPredicted RBP12.31□□□□□ -0.44
SCAF1-204ENST00000601038 PSMG4Q5JS54 123 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 CLVS1Q8IUQ0 354 aaPredicted RBP12.31□□□□□ -0.44
SCAF1-204ENST00000601038 SEPSECSQ9HD40 501 aaKnown RBP12.31□□□□□ -0.44
SCAF1-204ENST00000601038 APLNQ9ULZ1 77 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 U3KQ87 197 aa12.31□□□□□ -0.44
SCAF1-204ENST00000601038 KMT2AQ03164 3969 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 ANKRD20A5PA0PJZ0 165 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 BUB3O43684 328 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 TOMM40O96008 361 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 HLA-DMBP28068 263 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 SNRPD3P62318 126 aaKnown RBP12.3□□□□□ -0.44
SCAF1-204ENST00000601038 ACY3Q96HD9 319 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 SCGB3A2Q96PL1 93 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 NRN1Q9NPD7 142 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 CLEC5AQ9NY25 188 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 SCP2D1Q9UJQ7 156 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 TBC1D24Q9ULP9 559 aa12.3□□□□□ -0.44
SCAF1-204ENST00000601038 ELOA3CA0A087WX78 387 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-204ENST00000601038 FAM90A26D6RGX4 464 aa12.29□□□□□ -0.44
SCAF1-204ENST00000601038 GSTZ1O43708 216 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-204ENST00000601038 IFNA10P01566 189 aa12.29□□□□□ -0.44
SCAF1-204ENST00000601038 CCR6P51684 374 aa12.29□□□□□ -0.44
SCAF1-204ENST00000601038 NUTF2P61970 127 aaKnown RBP12.29□□□□□ -0.44
SCAF1-204ENST00000601038 CENPSQ8N2Z9 138 aa12.29□□□□□ -0.44
SCAF1-204ENST00000601038 CCDC59Q9P031 241 aaKnown RBP12.29□□□□□ -0.44
SCAF1-204ENST00000601038 HSPB7Q9UBY9 170 aa12.29□□□□□ -0.44
SCAF1-204ENST00000601038 A0A0B4J2A0 478 aa12.28□□□□□ -0.44
SCAF1-204ENST00000601038 PSG1P11464 419 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms