RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 TMBIM6P55061 237 aa11□□□□□ -0.65
SHKBP1-226ENST00000600791 STXBP6Q8NFX7 210 aa11□□□□□ -0.65
SHKBP1-226ENST00000600791 OR11H2Q8NH07 326 aa11□□□□□ -0.65
SHKBP1-226ENST00000600791 RNASEH2CQ8TDP1 164 aaKnown RBP11□□□□□ -0.65
SHKBP1-226ENST00000600791 TMEM170AQ8WVE7 144 aa11□□□□□ -0.65
SHKBP1-226ENST00000600791 BCL7BQ9BQE9 202 aa11□□□□□ -0.65
SHKBP1-226ENST00000600791 C11orf68Q9H3H3 251 aaKnown RBP11□□□□□ -0.65
SHKBP1-226ENST00000600791 KLK5Q9Y337 293 aaPredicted RBP11□□□□□ -0.65
SHKBP1-226ENST00000600791 K7EQG2 157 aa10.99□□□□□ -0.65
SHKBP1-226ENST00000600791 SLC25A4P12235 298 aa10.99□□□□□ -0.65
SHKBP1-226ENST00000600791 TMEM187Q14656 261 aa10.99□□□□□ -0.65
SHKBP1-226ENST00000600791 RBMS2Q15434 407 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-226ENST00000600791 OR1S2Q8NGQ3 325 aa10.99□□□□□ -0.65
SHKBP1-226ENST00000600791 PHLDA1Q8WV24 401 aaPredicted RBP10.99□□□□□ -0.65
SHKBP1-226ENST00000600791 IL22RA2Q969J5 263 aa10.99□□□□□ -0.65
SHKBP1-226ENST00000600791 NARS2Q96I59 477 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-226ENST00000600791 SLIRPQ9GZT3 109 aaKnown RBP10.99□□□□□ -0.65
SHKBP1-226ENST00000600791 AGRNO00468 2067 aa10.99□□□□□ -0.65
SHKBP1-226ENST00000600791 SULT1A3P0DMM9 295 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 SULT1A4P0DMN0 295 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 NPY1RP25929 384 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 OR10J1P30954 320 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 NMSQ5H8A3 153 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 STHQ8IWL8 128 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 DCANP1Q8TF63 244 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 GRAMD2BQ96HH9 432 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 RSL24D1Q9UHA3 163 aaKnown RBP10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 SCP2D1Q9UJQ7 156 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 U3KQE9 123 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 KMT2AQ03164 3969 aa10.98□□□□□ -0.65
SHKBP1-226ENST00000600791 FRAS1Q86XX4 4008 aa10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 H3BMQ9 156 aa10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 ZNF688P0C7X2 276 aa10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 NANOS2P60321 138 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 YPEL3P61236 119 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 SUPT4H1P63272 117 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 USF2Q15853 346 aaPredicted RBP10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 TRPT1Q86TN4 253 aaKnown RBP10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 Q8WTZ3 238 aa10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 SOSTQ9BQB4 213 aa10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 MCUBQ9NWR8 336 aa10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 CACFD1Q9UGQ2 172 aa10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 KCNIP3Q9Y2W7 256 aa10.97□□□□□ -0.65
SHKBP1-226ENST00000600791 DEFB4AO15263 64 aa10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 NOL3O60936 208 aaKnown RBP10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 HNRNPCP07910 306 aaKnown RBP eCLIP10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 GIG44P09565 113 aaPredicted RBP10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 AKR1C4P17516 323 aa10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 TNFSF8P32971 234 aa10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 ETFRF1Q6IPR1 90 aa10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 C11orf45Q8TAV5 145 aa10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 GLMPQ8WWB7 406 aa10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 ACY3Q96HD9 319 aa10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 SCGB3A2Q96PL1 93 aa10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 MFFQ9GZY8 342 aa10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 HSPB7Q9UBY9 170 aa10.96□□□□□ -0.65
SHKBP1-226ENST00000600791 A0A0B4J2A0 478 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 HELTA6NFD8 242 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 FABP12A6NFH5 140 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 KNCNA6PVL3 124 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 IFNA10P01566 189 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 IL4P05112 153 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 C4BPBP20851 252 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 EIF2B2P49770 351 aaKnown RBP10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 CCR6P51684 374 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 SMCO1Q147U7 214 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 C16orf54Q6UWD8 224 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 LYZL2Q7Z4W2 148 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 NOXA1Q86UR1 476 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 DTD1Q8TEA8 209 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 NPIPB3Q92617 1050 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 FBXL17Q9UF56 701 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 SHPKQ9UHJ6 478 aa10.95□□□□□ -0.66
SHKBP1-226ENST00000600791 TOMM40O96008 361 aa10.94□□□□□ -0.66
SHKBP1-226ENST00000600791 SPP1P10451 314 aa10.94□□□□□ -0.66
SHKBP1-226ENST00000600791 DHRS2Q13268 280 aa10.94□□□□□ -0.66
SHKBP1-226ENST00000600791 ACTL10Q5JWF8 245 aa10.94□□□□□ -0.66
SHKBP1-226ENST00000600791 MORN3Q6PF18 240 aaPredicted RBP10.94□□□□□ -0.66
SHKBP1-226ENST00000600791 LGI3Q8N145 548 aa10.94□□□□□ -0.66
SHKBP1-226ENST00000600791 Q8NAQ8 132 aa10.94□□□□□ -0.66
SHKBP1-226ENST00000600791 MCFD2Q8NI22 146 aa10.94□□□□□ -0.66
SHKBP1-226ENST00000600791 RBKSQ9H477 322 aa10.94□□□□□ -0.66
SHKBP1-226ENST00000600791 U3KQ87 197 aa10.94□□□□□ -0.66
SHKBP1-226ENST00000600791 RD3LP0DJH9 198 aa10.93□□□□□ -0.66
SHKBP1-226ENST00000600791 ANXA3P12429 323 aa10.93□□□□□ -0.66
SHKBP1-226ENST00000600791 AP2S1P53680 142 aaPredicted RBP10.93□□□□□ -0.66
SHKBP1-226ENST00000600791 SRPXP78539 464 aa10.93□□□□□ -0.66
SHKBP1-226ENST00000600791 KLF9Q13886 244 aaPredicted RBP10.93□□□□□ -0.66
SHKBP1-226ENST00000600791 TMEM41BQ5BJD5 291 aa10.93□□□□□ -0.66
SHKBP1-226ENST00000600791 PSMG4Q5JS54 123 aa10.93□□□□□ -0.66
SHKBP1-226ENST00000600791 TRIM63Q969Q1 353 aa10.93□□□□□ -0.66
SHKBP1-226ENST00000600791 IGHV4-28A0A0C4DH34 117 aa10.92□□□□□ -0.66
SHKBP1-226ENST00000600791 FAM90A26D6RGX4 464 aa10.92□□□□□ -0.66
SHKBP1-226ENST00000600791 BUB3O43684 328 aa10.92□□□□□ -0.66
SHKBP1-226ENST00000600791 PSG1P11464 419 aa10.92□□□□□ -0.66
SHKBP1-226ENST00000600791 RPP25LQ8N5L8 163 aaKnown RBP10.92□□□□□ -0.66
SHKBP1-226ENST00000600791 NRN1Q9NPD7 142 aa10.92□□□□□ -0.66
SHKBP1-226ENST00000600791 VPS13DQ5THJ4 4388 aa10.92□□□□□ -0.66
SHKBP1-226ENST00000600791 ZNF705EA8MWA4 302 aaPredicted RBP10.91□□□□□ -0.66
SHKBP1-226ENST00000600791 IFNA4P05014 189 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms