RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 TMEM268Q5VZI3 342 aa10.83□□□□□ -0.68
IRF3-223ENST00000599223 THOC7Q6I9Y2 204 aaKnown RBP10.83□□□□□ -0.68
IRF3-223ENST00000599223 CEMP1Q6PRD7 247 aaPredicted RBP10.83□□□□□ -0.68
IRF3-223ENST00000599223 RPP25LQ8N5L8 163 aaKnown RBP10.83□□□□□ -0.68
IRF3-223ENST00000599223 OR1L8Q8NGR8 309 aa10.83□□□□□ -0.68
IRF3-223ENST00000599223 CD300LFQ8TDQ1 290 aa10.83□□□□□ -0.68
IRF3-223ENST00000599223 GLYATL2Q8WU03 294 aa10.83□□□□□ -0.68
IRF3-223ENST00000599223 RBPMSQ93062 196 aaKnown RBP10.83□□□□□ -0.68
IRF3-223ENST00000599223 LSM10Q969L4 123 aaKnown RBP10.83□□□□□ -0.68
IRF3-223ENST00000599223 RNF183Q96D59 192 aa10.83□□□□□ -0.68
IRF3-223ENST00000599223 SEC22AQ96IW7 307 aa10.83□□□□□ -0.68
IRF3-223ENST00000599223 TP53RKQ96S44 253 aa10.83□□□□□ -0.68
IRF3-223ENST00000599223 HERC2O95714 4834 aa10.83□□□□□ -0.68
IRF3-223ENST00000599223 ADAP1O75689 374 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 KRASP01116 189 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 RLN2P04090 185 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 UCP1P25874 307 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 NUP62P37198 522 aaPredicted RBP10.82□□□□□ -0.68
IRF3-223ENST00000599223 NKX2-5P52952 324 aaPredicted RBP10.82□□□□□ -0.68
IRF3-223ENST00000599223 ERVK-16P61578 105 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 IAH1Q2TAA2 248 aaPredicted RBP10.82□□□□□ -0.68
IRF3-223ENST00000599223 GGNBP1Q5YKI7 109 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 SPSB3Q6PJ21 355 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 APRG1Q8IVJ8 170 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 UBAC2Q8NBM4 344 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 OR5B3Q8NH48 314 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 TMEM56Q96MV1 263 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 FAM212BQ9NTI7 297 aaPredicted RBP10.82□□□□□ -0.68
IRF3-223ENST00000599223 PRR13Q9NZ81 148 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 GSKIPQ9P0R6 139 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 OR51B2Q9Y5P1 312 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 TMEM56-RWDD3S4R434 201 aa10.82□□□□□ -0.68
IRF3-223ENST00000599223 FXYD6-FXYD2A0A087WZ82 144 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 IGHV3-49A0A0A0MS15 119 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 KIR2DL5BA0A0G2JN68 375 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 KIR2DL5BA0A0G2JPC4 375 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 CDS2O95674 445 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 LPAR6P43657 344 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 HSD17B13Q7Z5P4 300 aaPredicted RBP10.81□□□□□ -0.68
IRF3-223ENST00000599223 KIR2DL5AQ8N109 375 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 KIR2DL5BQ8NHK3 375 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 PPP1R1CQ8WVI7 109 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 RRNAD1Q96FB5 475 aaKnown RBP10.81□□□□□ -0.68
IRF3-223ENST00000599223 RNF2Q99496 336 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 KRTAP17-1Q9BYP8 105 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 MAP6D1Q9H9H5 199 aa10.81□□□□□ -0.68
IRF3-223ENST00000599223 OR4C46A6NHA9 309 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 C15orf62A8K5M9 175 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 UBE2CO00762 179 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 CYB5BO43169 146 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 DEDDO75618 318 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 CTSGP08311 255 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 ATF4P18848 351 aaPredicted RBP10.8□□□□□ -0.68
IRF3-223ENST00000599223 AKR1C2P52895 323 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 LRRC37A5PQ49AS3 106 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 Q56UQ5 140 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 STPG3Q8N7X2 389 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 SLC35G3Q8N808 338 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 INO80EQ8NBZ0 244 aaPredicted RBP10.8□□□□□ -0.68
IRF3-223ENST00000599223 TMEM14BQ9NUH8 114 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 SMPXQ9UHP9 88 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 HSPB11Q9Y547 144 aa10.8□□□□□ -0.68
IRF3-223ENST00000599223 C15orf61A6NNL5 157 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 HMSDA8MTL9 139 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 K7EMT4 169 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 L7N2F9 121 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 CHEK1O14757 476 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 IGHV3-48P01763 117 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 S100A10P60903 97 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 LAMTOR1Q6IAA8 161 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 LYZL2Q7Z4W2 148 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 ZNF546Q86UE3 836 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 SELENOHQ8IZQ5 122 aaKnown RBP10.79□□□□□ -0.68
IRF3-223ENST00000599223 ZBTB8BQ8NAP8 495 aaPredicted RBP10.79□□□□□ -0.68
IRF3-223ENST00000599223 ATP6V0BQ99437 205 aa10.79□□□□□ -0.68
IRF3-223ENST00000599223 IGKV3-7A0A075B6H7 116 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 IGHV3OR16-13A0A075B7E8 117 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 IGHV3-74A0A0B4J1X5 117 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 IGHV7-4-1A0A0J9YVY3 117 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 I3L2K1 104 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 MPC2O95563 127 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 SCGB1D2O95969 90 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 IGKV1-39P01597 117 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 IGKV1D-39P04432 117 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 SLC25A4P12235 298 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 TFPI2P48307 235 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 FAM219AQ8IW50 185 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 OR1P1Q8NH06 330 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 PHLDA1Q8WV24 401 aaPredicted RBP10.78□□□□□ -0.68
IRF3-223ENST00000599223 OR10C1Q96KK4 312 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 RHPN1-AS1Q9BWJ2 59 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 PRNDQ9UKY0 176 aa10.78□□□□□ -0.68
IRF3-223ENST00000599223 ARPC5O15511 151 aa10.77□□□□□ -0.69
IRF3-223ENST00000599223 SLC25A6P12236 298 aa10.77□□□□□ -0.69
IRF3-223ENST00000599223 PVALBP20472 110 aaPredicted RBP10.77□□□□□ -0.69
IRF3-223ENST00000599223 FAM90A2PQ658T7 463 aa10.77□□□□□ -0.69
IRF3-223ENST00000599223 C9orf62Q8N4C0 152 aa10.77□□□□□ -0.69
IRF3-223ENST00000599223 TMEM116Q8NCL8 245 aa10.77□□□□□ -0.69
IRF3-223ENST00000599223 MISP3Q96FF7 219 aa10.77□□□□□ -0.69
IRF3-223ENST00000599223 A0A0D9SG52 128 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms