RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 IGLV2-18A0A075B6J9 118 aa11.24□□□□□ -0.61
LIG1-214ENST00000597146 IGHV3OR16-8A0A075B7F1 116 aa11.24□□□□□ -0.61
LIG1-214ENST00000597146 TRAV10A0A0B4J240 114 aa11.24□□□□□ -0.61
LIG1-214ENST00000597146 PIGBOS1A0A0B4J2F0 54 aa11.24□□□□□ -0.61
LIG1-214ENST00000597146 CORTO00230 105 aa11.24□□□□□ -0.61
LIG1-214ENST00000597146 SPCS3P61009 180 aa11.24□□□□□ -0.61
LIG1-214ENST00000597146 TMED4Q7Z7H5 227 aa11.24□□□□□ -0.61
LIG1-214ENST00000597146 CHRDL1Q9BU40 450 aa11.24□□□□□ -0.61
LIG1-214ENST00000597146 DAZ1Q9NQZ3 744 aaKnown RBP11.24□□□□□ -0.61
LIG1-214ENST00000597146 UBR4Q5T4S7 5183 aa11.24□□□□□ -0.61
LIG1-214ENST00000597146 I3L2K1 104 aa11.23□□□□□ -0.61
LIG1-214ENST00000597146 ZNF701M0R085 212 aaPredicted RBP11.23□□□□□ -0.61
LIG1-214ENST00000597146 CTSGP08311 255 aa11.23□□□□□ -0.61
LIG1-214ENST00000597146 Q8NAQ8 132 aa11.23□□□□□ -0.61
LIG1-214ENST00000597146 ZNF114Q8NC26 417 aa11.23□□□□□ -0.61
LIG1-214ENST00000597146 TMEM190Q8WZ59 177 aa11.23□□□□□ -0.61
LIG1-214ENST00000597146 GPR146Q96CH1 333 aa11.23□□□□□ -0.61
LIG1-214ENST00000597146 RNF126Q9BV68 326 aa11.23□□□□□ -0.61
LIG1-214ENST00000597146 HRH4Q9H3N8 390 aa11.23□□□□□ -0.61
LIG1-214ENST00000597146 SCRT2Q9NQ03 307 aa11.23□□□□□ -0.61
LIG1-214ENST00000597146 CACNG5Q9UF02 275 aa11.23□□□□□ -0.61
LIG1-214ENST00000597146 OR4C46A6NHA9 309 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 K7EMT4 169 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 CA1P00915 261 aaPredicted RBP11.22□□□□□ -0.61
LIG1-214ENST00000597146 AMBPP02760 352 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 SULT1A3P0DMM9 295 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 SULT1A4P0DMN0 295 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 P0DMU3 169 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 FAM231AP0DMU4 169 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 FAM231CP0DMU5 169 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 OPRK1P41145 380 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 HTR2BP41595 481 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 SRPXP78539 464 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 NOXA1Q86UR1 476 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 LGI3Q8N145 548 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 GINS3Q9BRX5 216 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 SCRT1Q9BWW7 348 aa11.22□□□□□ -0.61
LIG1-214ENST00000597146 NACAE9PAV3 2078 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 TRAV14DV4A0A0A6YYC5 116 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 A0A0G2JRQ6 117 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 RPS10-NUDT3A0A1W2PQS6 291 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 C15orf62A8K5M9 175 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 NXPH3O95157 252 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 P0C879 139 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 RBMY1A1P0DJD3 496 aaKnown RBP11.21□□□□□ -0.61
LIG1-214ENST00000597146 RBMY1CP0DJD4 496 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 VAMP1P23763 118 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 RBMY1FQ15415 496 aaKnown RBP11.21□□□□□ -0.61
LIG1-214ENST00000597146 TRIQKQ629K1 86 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 Q6ZR54 194 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 Q6ZRM9 215 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 TMEM116Q8NCL8 245 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 OR52E5Q8NH55 327 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 IL22RA2Q969J5 263 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 TMEM230Q96A57 120 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 TMEM56-RWDD3S4R434 201 aa11.21□□□□□ -0.61
LIG1-214ENST00000597146 IGHV3-49A0A0A0MS15 119 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 IGHV4-28A0A0C4DH34 117 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 INS-IGF2F8WCM5 200 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 RNASE2P10153 161 aaKnown RBP11.2□□□□□ -0.62
LIG1-214ENST00000597146 ADMP35318 185 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 RPL11P62913 178 aaKnown RBP11.2□□□□□ -0.62
LIG1-214ENST00000597146 KLF9Q13886 244 aaPredicted RBP11.2□□□□□ -0.62
LIG1-214ENST00000597146 TMEM187Q14656 261 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 OR1S1Q8NH92 325 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 LHFPL5Q8TAF8 219 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 SLC25A21Q9BQT8 299 aaPredicted RBP11.2□□□□□ -0.62
LIG1-214ENST00000597146 PRR13Q9NZ81 148 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 NDUFA13Q9P0J0 144 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 AGRNO00468 2067 aa11.2□□□□□ -0.62
LIG1-214ENST00000597146 LINC00854A0A1B0GVQ3 168 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 CENPXA8MT69 81 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 TMEM50AO95807 157 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 IFNA10P01566 189 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 CCR6P51684 374 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 PAFAH1B2P68402 229 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 TMEM128Q5BJH2 165 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 ZNF767PQ75MW2 155 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 LYZL2Q7Z4W2 148 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 CCDC190Q86UF4 302 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 NARS2Q96I59 477 aaKnown RBP11.19□□□□□ -0.62
LIG1-214ENST00000597146 RHPN1-AS1Q9BWJ2 59 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 V9GYH0 126 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 MYCBP2O75592 4640 aa11.19□□□□□ -0.62
LIG1-214ENST00000597146 IGKV3-7A0A075B6H7 116 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 TRAV30A0A087WSZ9 112 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 A0A0B4J2A0 478 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 F8W735 103 aaPredicted RBP11.18□□□□□ -0.62
LIG1-214ENST00000597146 TFPI2P48307 235 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 CMC4P56277 68 aaPredicted RBP11.18□□□□□ -0.62
LIG1-214ENST00000597146 SMCO1Q147U7 214 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 MLANAQ16655 118 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 ETFRF1Q6IPR1 90 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 ZNF600Q6ZNG1 722 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 DEDD2Q8WXF8 326 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 RBM38Q9H0Z9 239 aaKnown RBP11.18□□□□□ -0.62
LIG1-214ENST00000597146 SHPKQ9UHJ6 478 aa11.18□□□□□ -0.62
LIG1-214ENST00000597146 IGHV3OR16-13A0A075B7E8 117 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms