RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 SLC25A6P12236 298 aa7.79□□□□□ -1.16
CCDC9-203ENST00000596938 CRYBB3P26998 211 aa7.79□□□□□ -1.16
CCDC9-203ENST00000596938 YPEL3P61236 119 aaPredicted RBP7.79□□□□□ -1.16
CCDC9-203ENST00000596938 ZFAND6Q6FIF0 208 aa7.79□□□□□ -1.16
CCDC9-203ENST00000596938 WFDC3Q8IUB2 231 aa7.79□□□□□ -1.16
CCDC9-203ENST00000596938 LRTM2Q8N967 370 aa7.79□□□□□ -1.16
CCDC9-203ENST00000596938 Q8WTZ3 238 aa7.79□□□□□ -1.16
CCDC9-203ENST00000596938 ST8SIA2Q92186 375 aa7.79□□□□□ -1.16
CCDC9-203ENST00000596938 TMEM231Q9H6L2 316 aa7.79□□□□□ -1.16
CCDC9-203ENST00000596938 SPRY2O43597 315 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 PITX3O75364 302 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 DFFBO76075 338 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 IFNA10P01566 189 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 IGLC1P0CG04 106 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 NPY1RP25929 384 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 TFPI2P48307 235 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 TIGITQ495A1 244 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 TMED4Q7Z7H5 227 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 GBGT1Q8N5D6 347 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 STPG3Q8N7X2 389 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 OR1S2Q8NGQ3 325 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 DTD1Q8TEA8 209 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 METTL26Q96S19 204 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 SRRQ9GZT4 340 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 MS4A6AQ9H2W1 248 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 RBKSQ9H477 322 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 MAP6D1Q9H9H5 199 aa7.78□□□□□ -1.16
CCDC9-203ENST00000596938 DNAH1Q9P2D7 4330 aa7.77□□□□□ -1.16
CCDC9-203ENST00000596938 IGKV3-7A0A075B6H7 116 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 IGHV3-66A0A0C4DH42 116 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 DNASE2O00115 360 aaPredicted RBP7.77□□□□□ -1.17
CCDC9-203ENST00000596938 NXPH3O95157 252 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 OR10J1P30954 320 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 GPX4P36969 197 aaPredicted RBP7.77□□□□□ -1.17
CCDC9-203ENST00000596938 RND2P52198 227 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 RPL11P62913 178 aaKnown RBP7.77□□□□□ -1.17
CCDC9-203ENST00000596938 APRG1Q8IVJ8 170 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 NPIPB3Q92617 1050 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 RNF183Q96D59 192 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 NARS2Q96I59 477 aaKnown RBP7.77□□□□□ -1.17
CCDC9-203ENST00000596938 CSTL1Q9H114 145 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 TMED3Q9Y3Q3 217 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 U3KQE9 123 aa7.77□□□□□ -1.17
CCDC9-203ENST00000596938 TENM2Q9NT68 2774 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 LYSTQ99698 3801 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 NAP1L6A6NFF2 107 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 FAM90A26D6RGX4 464 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 SFT2D2O95562 160 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 RD3LP0DJH9 198 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 RPL35AP18077 110 aaKnown RBP7.76□□□□□ -1.17
CCDC9-203ENST00000596938 VAMP1P23763 118 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 UBE2MP61081 183 aaKnown RBP7.76□□□□□ -1.17
CCDC9-203ENST00000596938 RBMS2Q15434 407 aaKnown RBP7.76□□□□□ -1.17
CCDC9-203ENST00000596938 BAK1Q16611 211 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 CENPSQ8N2Z9 138 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 OR1S1Q8NH92 325 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 GRAMD2BQ96HH9 432 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 NDUFA13Q9P0J0 144 aa7.76□□□□□ -1.17
CCDC9-203ENST00000596938 PLECQ15149 4684 aaKnown RBP7.75□□□□□ -1.17
CCDC9-203ENST00000596938 LCE6AA0A183 80 aa7.75□□□□□ -1.17
CCDC9-203ENST00000596938 MPTX1A8MV57 137 aa7.75□□□□□ -1.17
CCDC9-203ENST00000596938 MED6O75586 246 aa7.75□□□□□ -1.17
CCDC9-203ENST00000596938 NDUFB6O95139 128 aa7.75□□□□□ -1.17
CCDC9-203ENST00000596938 TOMM40O96008 361 aa7.75□□□□□ -1.17
CCDC9-203ENST00000596938 IFNA4P05014 189 aa7.75□□□□□ -1.17
CCDC9-203ENST00000596938 HNRNPCP07910 306 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC9-203ENST00000596938 ATF4P18848 351 aaPredicted RBP7.75□□□□□ -1.17
CCDC9-203ENST00000596938 P2RY1P47900 373 aa7.75□□□□□ -1.17
CCDC9-203ENST00000596938 EIF2B2P49770 351 aaKnown RBP7.75□□□□□ -1.17
CCDC9-203ENST00000596938 AP2S1P53680 142 aaPredicted RBP7.75□□□□□ -1.17
CCDC9-203ENST00000596938 PPP1R1AQ13522 171 aa7.75□□□□□ -1.17
CCDC9-203ENST00000596938 ACY3Q96HD9 319 aa7.75□□□□□ -1.17
CCDC9-203ENST00000596938 HELTA6NFD8 242 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 K7EQG2 157 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 INPP1P49441 399 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 DEFB131AP59861 70 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 GAMTQ14353 236 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 ZNF124Q15973 351 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 DEFB135Q30KP9 77 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 TRIQKQ629K1 86 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 C16orf54Q6UWD8 224 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 DCANP1Q8TF63 244 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 CIB3Q96Q77 187 aaPredicted RBP7.74□□□□□ -1.17
CCDC9-203ENST00000596938 SDHCQ99643 169 aaPredicted RBP7.74□□□□□ -1.17
CCDC9-203ENST00000596938 RABAC1Q9UI14 185 aa7.74□□□□□ -1.17
CCDC9-203ENST00000596938 C9orf170A2RU37 121 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 CENPXA8MT69 81 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 BUB3O43684 328 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 IL4P05112 153 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 HOXB5P09067 269 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 PSG1P11464 419 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 RAB11AP62491 216 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 RPP30P78346 268 aaKnown RBP7.73□□□□□ -1.17
CCDC9-203ENST00000596938 USF2Q15853 346 aaPredicted RBP7.73□□□□□ -1.17
CCDC9-203ENST00000596938 CNPY1Q3B7I2 92 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 LYG2Q86SG7 212 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 FAM24BQ8N5W8 94 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 OR51G1Q8NGK1 321 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 GATAD1Q8WUU5 269 aa7.73□□□□□ -1.17
CCDC9-203ENST00000596938 GLMPQ8WWB7 406 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms