RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 MISP3Q96FF7 219 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 OR10C1Q96KK4 312 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 C20orf24Q9BUV8 137 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 FNDC4Q9H6D8 234 aaPredicted RBP7.75□□□□□ -1.17
LIG1-213ENST00000596672 SHPKQ9UHJ6 478 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 SMPXQ9UHP9 88 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 UFC1Q9Y3C8 167 aa7.75□□□□□ -1.17
LIG1-213ENST00000596672 A0A1B0GU03 582 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 C5orf51A6NDU8 294 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 K7EMT4 169 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 CHEK1O14757 476 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 ADAP1O75689 374 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 HOXB5P09067 269 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 GIPP09681 153 aaPredicted RBP7.74□□□□□ -1.17
LIG1-213ENST00000596672 RNASE2P10153 161 aaKnown RBP7.74□□□□□ -1.17
LIG1-213ENST00000596672 FCGR2BP31994 310 aaPredicted RBP7.74□□□□□ -1.17
LIG1-213ENST00000596672 H2BFSP57053 126 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 Q56UQ5 140 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 Q5BKY6 102 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 SPSB3Q6PJ21 355 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 H2BFWTQ7Z2G1 175 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 FAM24BQ8N5W8 94 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 OR1L6Q8NGR2 347 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 GLYATL2Q8WU03 294 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 ATP6V0BQ99437 205 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 GGTLC1Q9BX51 225 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 ZFAND3Q9H8U3 227 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 DAZ1Q9NQZ3 744 aaKnown RBP7.74□□□□□ -1.17
LIG1-213ENST00000596672 THYN1Q9P016 225 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 DNAH6Q9C0G6 4158 aa7.74□□□□□ -1.17
LIG1-213ENST00000596672 IGHV7-4-1A0A0J9YVY3 117 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 UCP1P25874 307 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 HTR2BP41595 481 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 RAP2BP61225 183 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 BSXQ3C1V8 233 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 TOMM20LQ6UXN7 152 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 GSG1LQ6UXU4 331 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 SLC16A13Q7RTY0 426 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 LYZL2Q7Z4W2 148 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 APRG1Q8IVJ8 170 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 LGI3Q8N145 548 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 OR2T35Q8NGX2 323 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 OR4A16Q8NH70 328 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 GALNT14Q96FL9 552 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 TMEM56Q96MV1 263 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 SPAG8Q99932 426 aaPredicted RBP7.73□□□□□ -1.17
LIG1-213ENST00000596672 PDCD10Q9BUL8 212 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 RHPN1-AS1Q9BWJ2 59 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 FKBP11Q9NYL4 201 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 HSPB11Q9Y547 144 aa7.73□□□□□ -1.17
LIG1-213ENST00000596672 LOC102724200A0A096LPH7 203 aaPredicted RBP7.72□□□□□ -1.17
LIG1-213ENST00000596672 C15orf62A8K5M9 175 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 MPTX1A8MV57 137 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 INS-IGF2F8WCM5 200 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 TMEM50AO95807 157 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 IFNA7P01567 189 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 IFNA21P01568 189 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 RPL35AP18077 110 aaKnown RBP7.72□□□□□ -1.17
LIG1-213ENST00000596672 MFAP4P55083 255 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 DEFB135Q30KP9 77 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 AARDQ4LEZ3 155 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 TMEM268Q5VZI3 342 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 GGNBP1Q5YKI7 109 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 RBPMS2Q6ZRY4 209 aaKnown RBP7.72□□□□□ -1.17
LIG1-213ENST00000596672 SELENOHQ8IZQ5 122 aaKnown RBP7.72□□□□□ -1.17
LIG1-213ENST00000596672 C9orf62Q8N4C0 152 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 ST8SIA2Q92186 375 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 PINX1Q96BK5 328 aaKnown RBP7.72□□□□□ -1.17
LIG1-213ENST00000596672 TMEM222Q9H0R3 208 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 GSKIPQ9P0R6 139 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 BOLA1Q9Y3E2 137 aa7.72□□□□□ -1.17
LIG1-213ENST00000596672 IGKV3-7A0A075B6H7 116 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 IGHV3-66A0A0C4DH42 116 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 A0A0J9YWU9 116 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 G3V3Q6 166 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 NUPL2O15504 423 aaKnown RBP7.71□□□□□ -1.18
LIG1-213ENST00000596672 NXPH3O95157 252 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 CDS2O95674 445 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 IGKV1-17P01599 117 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 TFPI2P48307 235 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 GBGT1Q8N5D6 347 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 LRTM2Q8N967 370 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 OR11H4Q8NGC9 324 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 ASB13Q8WXK3 278 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 GPR146Q96CH1 333 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 VSIRQ9H7M9 311 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 TMEM56-RWDD3S4R434 201 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 DNAH17Q9UFH2 4485 aa7.71□□□□□ -1.18
LIG1-213ENST00000596672 DNAH2Q9P225 4427 aa7.7□□□□□ -1.18
LIG1-213ENST00000596672 LINC00862A6NCI5 91 aa7.7□□□□□ -1.18
LIG1-213ENST00000596672 YIF1AO95070 293 aa7.7□□□□□ -1.18
LIG1-213ENST00000596672 GIG44P09565 113 aaPredicted RBP7.7□□□□□ -1.18
LIG1-213ENST00000596672 RAB14P61106 215 aa7.7□□□□□ -1.18
LIG1-213ENST00000596672 SRPXP78539 464 aa7.7□□□□□ -1.18
LIG1-213ENST00000596672 TNFRSF9Q07011 255 aa7.7□□□□□ -1.18
LIG1-213ENST00000596672 IAH1Q2TAA2 248 aaPredicted RBP7.7□□□□□ -1.18
LIG1-213ENST00000596672 LRRC37A5PQ49AS3 106 aa7.7□□□□□ -1.18
LIG1-213ENST00000596672 LAMTOR1Q6IAA8 161 aa7.7□□□□□ -1.18
LIG1-213ENST00000596672 WFDC3Q8IUB2 231 aa7.7□□□□□ -1.18
LIG1-213ENST00000596672 SLC35G3Q8N808 338 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms