RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 EIF2B2P49770 351 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-204ENST00000594862 YPEL3P61236 119 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-204ENST00000594862 PPP1R1AQ13522 171 aa13.21□□□□□ -0.29
SHKBP1-204ENST00000594862 CNPY1Q3B7I2 92 aa13.21□□□□□ -0.29
SHKBP1-204ENST00000594862 ODF3L2Q3SX64 289 aa13.21□□□□□ -0.29
SHKBP1-204ENST00000594862 TCF24Q7RTU0 167 aa13.21□□□□□ -0.29
SHKBP1-204ENST00000594862 Q8WTZ3 238 aa13.21□□□□□ -0.29
SHKBP1-204ENST00000594862 RBKSQ9H477 322 aa13.21□□□□□ -0.29
SHKBP1-204ENST00000594862 MRPL36Q9P0J6 103 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-204ENST00000594862 IGHV3-49A0A0A0MS15 119 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 KIR2DL5BA0A0G2JN68 375 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 KIR2DL5BA0A0G2JPC4 375 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 NDUFB6O95139 128 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 IGKV1-17P01599 117 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 IGLC1P0CG04 106 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 OR10J1P30954 320 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 FAM90A2PQ658T7 463 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 KIR2DL5AQ8N109 375 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 KIR2DL5BQ8NHK3 375 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 ST8SIA2Q92186 375 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 CIB3Q96Q77 187 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 UBQLN2Q9UHD9 624 aa13.2□□□□□ -0.3
SHKBP1-204ENST00000594862 PITX3O75364 302 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 DFFBO76075 338 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 IFNA4P05014 189 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 CRYBB3P26998 211 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 RAB11AP62491 216 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 RPP30P78346 268 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 BAK1Q16611 211 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 TIGITQ495A1 244 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 CASC10Q5T4H9 136 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 Q6ZWC4 215 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 TMEM170AQ8WVE7 144 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 TP53TG1Q9Y2A0 90 aa13.19□□□□□ -0.3
SHKBP1-204ENST00000594862 HUWE1Q7Z6Z7 4374 aaKnown RBP13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 IGHV3OR16-13A0A075B7E8 117 aa13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 IGHV3-74A0A0B4J1X5 117 aa13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 DNASE2O00115 360 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 FABP1P07148 127 aa13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 GPX4P36969 197 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 NUP62P37198 522 aaPredicted RBP13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 MLANAQ16655 118 aa13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 STPG3Q8N7X2 389 aa13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 COQ8AQ8NI60 647 aa13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 SLC35E1Q96K37 410 aa13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 RETNQ9HD89 108 aa13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 PFDN2Q9UHV9 154 aa13.18□□□□□ -0.3
SHKBP1-204ENST00000594862 HELTA6NFD8 242 aa13.17□□□□□ -0.3
SHKBP1-204ENST00000594862 TOMM40O96008 361 aa13.17□□□□□ -0.3
SHKBP1-204ENST00000594862 IL7P13232 177 aa13.17□□□□□ -0.3
SHKBP1-204ENST00000594862 RPL11P62913 178 aaKnown RBP13.17□□□□□ -0.3
SHKBP1-204ENST00000594862 NPIPB3Q92617 1050 aa13.17□□□□□ -0.3
SHKBP1-204ENST00000594862 ACY3Q96HD9 319 aa13.17□□□□□ -0.3
SHKBP1-204ENST00000594862 HNRNPCP07910 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
SHKBP1-204ENST00000594862 P2RY1P47900 373 aa13.16□□□□□ -0.3
SHKBP1-204ENST00000594862 TFPI2P48307 235 aa13.16□□□□□ -0.3
SHKBP1-204ENST00000594862 AP2S1P53680 142 aaPredicted RBP13.16□□□□□ -0.3
SHKBP1-204ENST00000594862 LINC00299Q6ZSB3 139 aa13.16□□□□□ -0.3
SHKBP1-204ENST00000594862 MS4A6AQ9H2W1 248 aa13.16□□□□□ -0.3
SHKBP1-204ENST00000594862 MAP6D1Q9H9H5 199 aa13.16□□□□□ -0.3
SHKBP1-204ENST00000594862 IGKV3-7A0A075B6H7 116 aa13.15□□□□□ -0.3
SHKBP1-204ENST00000594862 C9orf170A2RU37 121 aa13.15□□□□□ -0.3
SHKBP1-204ENST00000594862 SYNGR2O43760 224 aa13.15□□□□□ -0.3
SHKBP1-204ENST00000594862 IFNA21P01568 189 aa13.15□□□□□ -0.3
SHKBP1-204ENST00000594862 APOHP02749 345 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-204ENST00000594862 HOXB5P09067 269 aa13.15□□□□□ -0.3
SHKBP1-204ENST00000594862 RD3LP0DJH9 198 aa13.15□□□□□ -0.3
SHKBP1-204ENST00000594862 WFDC3Q8IUB2 231 aa13.15□□□□□ -0.3
SHKBP1-204ENST00000594862 GBGT1Q8N5D6 347 aa13.15□□□□□ -0.3
SHKBP1-204ENST00000594862 SDHCQ99643 169 aaPredicted RBP13.15□□□□□ -0.3
SHKBP1-204ENST00000594862 IGHV3-66A0A0C4DH42 116 aa13.14□□□□□ -0.31
SHKBP1-204ENST00000594862 IL4P05112 153 aa13.14□□□□□ -0.31
SHKBP1-204ENST00000594862 DHRS2Q13268 280 aa13.14□□□□□ -0.31
SHKBP1-204ENST00000594862 C4orf46Q504U0 113 aa13.14□□□□□ -0.31
SHKBP1-204ENST00000594862 GGNBP1Q5YKI7 109 aa13.14□□□□□ -0.31
SHKBP1-204ENST00000594862 LYG2Q86SG7 212 aa13.14□□□□□ -0.31
SHKBP1-204ENST00000594862 OVOL2Q9BRP0 275 aa13.14□□□□□ -0.31
SHKBP1-204ENST00000594862 RABAC1Q9UI14 185 aa13.14□□□□□ -0.31
SHKBP1-204ENST00000594862 U3KQE9 123 aa13.14□□□□□ -0.31
SHKBP1-204ENST00000594862 DNAH7Q8WXX0 4024 aa13.13□□□□□ -0.31
SHKBP1-204ENST00000594862 TENM2Q9NT68 2774 aa13.13□□□□□ -0.31
SHKBP1-204ENST00000594862 LINC00854A0A1B0GVQ3 168 aa13.13□□□□□ -0.31
SHKBP1-204ENST00000594862 ZFP92A6NM28 416 aa13.13□□□□□ -0.31
SHKBP1-204ENST00000594862 SPRY2O43597 315 aa13.13□□□□□ -0.31
SHKBP1-204ENST00000594862 OR4E1P0C645 316 aa13.13□□□□□ -0.31
SHKBP1-204ENST00000594862 OR8G2PQ6IF36 304 aa13.13□□□□□ -0.31
SHKBP1-204ENST00000594862 OR51G1Q8NGK1 321 aa13.13□□□□□ -0.31
SHKBP1-204ENST00000594862 CCDC32Q9BV29 185 aa13.13□□□□□ -0.31
SHKBP1-204ENST00000594862 WRBO00258 174 aa13.12□□□□□ -0.31
SHKBP1-204ENST00000594862 IAPPP10997 89 aa13.12□□□□□ -0.31
SHKBP1-204ENST00000594862 BTCP35070 178 aa13.12□□□□□ -0.31
SHKBP1-204ENST00000594862 GAMTQ14353 236 aa13.12□□□□□ -0.31
SHKBP1-204ENST00000594862 APRG1Q8IVJ8 170 aa13.12□□□□□ -0.31
SHKBP1-204ENST00000594862 STXBP6Q8NFX7 210 aa13.12□□□□□ -0.31
SHKBP1-204ENST00000594862 RNF125Q96EQ8 232 aa13.12□□□□□ -0.31
SHKBP1-204ENST00000594862 MPTX1A8MV57 137 aa13.11□□□□□ -0.31
SHKBP1-204ENST00000594862 K7EQG2 157 aa13.11□□□□□ -0.31
SHKBP1-204ENST00000594862 LYRM1O43325 122 aa13.11□□□□□ -0.31
SHKBP1-204ENST00000594862 CFDP00746 253 aaPredicted RBP13.11□□□□□ -0.31
SHKBP1-204ENST00000594862 PSG1P11464 419 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms