RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 CXCL2P19875 107 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 GATA2P23769 480 aaPredicted RBP7.39□□□□□ -1.23
DDX39A-220ENST00000593008 ARL3P36405 182 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 CDX1P47902 265 aaPredicted RBP7.39□□□□□ -1.23
DDX39A-220ENST00000593008 RAB11AP62491 216 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 RPP30P78346 268 aaKnown RBP7.39□□□□□ -1.23
DDX39A-220ENST00000593008 ZNF90Q03938 601 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 UNQ9165/PRO28630Q6UXU0 137 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 WFDC9Q8NEX5 89 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 OR11H1Q8NG94 326 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 OR5C1Q8NGR4 320 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 GAR1Q9NY12 217 aaKnown RBP7.39□□□□□ -1.23
DDX39A-220ENST00000593008 HSPB11Q9Y547 144 aa7.39□□□□□ -1.23
DDX39A-220ENST00000593008 PRKDCP78527 4128 aaKnown RBP7.39□□□□□ -1.23
DDX39A-220ENST00000593008 CCL24O00175 119 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 TGOLN2O43493 480 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 ZNF207O43670 478 aaKnown RBP7.38□□□□□ -1.23
DDX39A-220ENST00000593008 IGKV1-17P01599 117 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 RLN2P04090 185 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 CTSGP08311 255 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 IGLC1P0CG04 106 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 PET100P0DJ07 73 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 HOXD3P31249 432 aaPredicted RBP7.38□□□□□ -1.23
DDX39A-220ENST00000593008 EIF2B2P49770 351 aaKnown RBP7.38□□□□□ -1.23
DDX39A-220ENST00000593008 AKR1C1Q04828 323 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 OR2F1Q13607 317 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 FHL3Q13643 280 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 KPRPQ5T749 579 aaPredicted RBP7.38□□□□□ -1.23
DDX39A-220ENST00000593008 STX12Q86Y82 276 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 OR1N2Q8NGR9 330 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 ASB13Q8WXK3 278 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 RCC1LQ96I51 464 aaKnown RBP7.38□□□□□ -1.23
DDX39A-220ENST00000593008 SLC35E1Q96K37 410 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 AQP10Q96PS8 301 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 MGST2Q99735 147 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 GPR61Q9BZJ8 451 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 PEF1Q9UBV8 284 aaKnown RBP7.38□□□□□ -1.23
DDX39A-220ENST00000593008 TGP01266 2768 aa7.38□□□□□ -1.23
DDX39A-220ENST00000593008 CORTO00230 105 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 GNG7O60262 68 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 CLN5O75503 358 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 OR10J1P30954 320 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 MYCNOSP40205 109 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 MFAP4P55083 255 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 DLK1P80370 383 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 RUNX1Q01196 453 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 FGL1Q08830 312 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 ZNF546Q86UE3 836 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 LILRB2Q8N423 598 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 OR10P1Q8NGE3 313 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 OR4X1Q8NH49 305 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 CACNG8Q8WXS5 425 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 DPF1Q92782 380 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 CXorf58Q96LI9 332 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 BOLA1Q9Y3E2 137 aa7.37□□□□□ -1.23
DDX39A-220ENST00000593008 IGHV3OR16-13A0A075B7E8 117 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 IGHV3-49A0A0A0MS15 119 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 TRBV7-1A0A0A6YYK4 115 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 IGHV3-74A0A0B4J1X5 117 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 RPS10-NUDT3A0A1W2PQS6 291 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 LINC01619G3V211 115 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 EIF3GO75821 320 aaKnown RBP eCLIP7.36□□□□□ -1.23
DDX39A-220ENST00000593008 C1QBP02746 253 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 GPX4P36969 197 aaPredicted RBP7.36□□□□□ -1.23
DDX39A-220ENST00000593008 SYNJ2BPP57105 145 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 KRTAP10-11P60412 298 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 VWC2Q2TAL6 325 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 LAMTOR1Q6IAA8 161 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 C9orf62Q8N4C0 152 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 THAP8Q8NA92 274 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 TMEM116Q8NCL8 245 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 OR1S2Q8NGQ3 325 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 DLX4Q92988 240 aaPredicted RBP7.36□□□□□ -1.23
DDX39A-220ENST00000593008 ATP6V0BQ99437 205 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 MCRIP2Q9BUT9 160 aaKnown RBP7.36□□□□□ -1.23
DDX39A-220ENST00000593008 TMEM147Q9BVK8 224 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 MFFQ9GZY8 342 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 SLC25A31Q9H0C2 315 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 CYTL1Q9NRR1 136 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 UQCC1Q9NVA1 299 aa7.36□□□□□ -1.23
DDX39A-220ENST00000593008 AURKAIP1Q9NWT8 199 aaPredicted RBP7.36□□□□□ -1.23
DDX39A-220ENST00000593008 ZFP92A6NM28 416 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 SCAF4O95104 1147 aaKnown RBP7.35□□□□□ -1.23
DDX39A-220ENST00000593008 HSPB1P04792 205 aaKnown RBP7.35□□□□□ -1.23
DDX39A-220ENST00000593008 FGF7P21781 194 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 FCGR2BP31994 310 aaPredicted RBP7.35□□□□□ -1.23
DDX39A-220ENST00000593008 BAXQ07812 192 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 ZNF616Q08AN1 781 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 LGALSLQ3ZCW2 172 aaPredicted RBP7.35□□□□□ -1.23
DDX39A-220ENST00000593008 ZFP69Q49AA0 526 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 GCSAMLQ5JQS6 135 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 MIC13Q5XKP0 118 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 RPL7L1Q6DKI1 246 aaKnown RBP7.35□□□□□ -1.23
DDX39A-220ENST00000593008 ETFRF1Q6IPR1 90 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 ATP5SQ99766 215 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 RSG1Q9BU20 258 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 SH3BGRL3Q9H299 93 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 ZFAND3Q9H8U3 227 aa7.35□□□□□ -1.23
DDX39A-220ENST00000593008 DOK5Q9P104 306 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms