RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 SLC17A3O00476 420 aa15.32■□□□□ 0.04
PRKCSH-209ENST00000589838 ISLRO14498 428 aa15.32■□□□□ 0.04
PRKCSH-209ENST00000589838 PRB3Q04118 309 aaPredicted RBP15.32■□□□□ 0.04
PRKCSH-209ENST00000589838 SRSF12Q8WXF0 261 aaKnown RBP15.32■□□□□ 0.04
PRKCSH-209ENST00000589838 SSBP3Q9BWW4 388 aaPredicted RBP15.32■□□□□ 0.04
PRKCSH-209ENST00000589838 HYPMO75409 117 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 LGALS4P56470 323 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 CTAG1AP78358 180 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 OR1B1Q8NGR6 318 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 TMEM18Q96B42 140 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 TRBV9A0A0B4J1U6 114 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 AMBPP02760 352 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 PYYP10082 97 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 ORM2P19652 201 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 PLP1P60201 277 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 ARF6P62330 175 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 OR5I1Q13606 314 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 COX19Q49B96 90 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 FXYD5Q96DB9 178 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 IGF2BP2-AS1Q96M15 143 aa15.31■□□□□ 0.04
PRKCSH-209ENST00000589838 TIMM23O14925 209 aa15.3■□□□□ 0.04
PRKCSH-209ENST00000589838 MOSP00540 346 aa15.3■□□□□ 0.04
PRKCSH-209ENST00000589838 PRTN3P24158 256 aa15.3■□□□□ 0.04
PRKCSH-209ENST00000589838 ZNF329Q86UD4 541 aa15.3■□□□□ 0.04
PRKCSH-209ENST00000589838 DTX2Q86UW9 622 aa15.3■□□□□ 0.04
PRKCSH-209ENST00000589838 OR1L6Q8NGR2 347 aa15.3■□□□□ 0.04
PRKCSH-209ENST00000589838 NAV3Q8IVL0 2385 aa15.3■□□□□ 0.04
PRKCSH-209ENST00000589838 LINC00587B1AMM8 73 aa15.29■□□□□ 0.04
PRKCSH-209ENST00000589838 CNIH1O95406 144 aa15.29■□□□□ 0.04
PRKCSH-209ENST00000589838 HIST1H1BP16401 226 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-209ENST00000589838 C1orf122Q6ZSJ8 110 aa15.29■□□□□ 0.04
PRKCSH-209ENST00000589838 ANKHD1Q8IWZ3 2542 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-209ENST00000589838 PEX7O00628 323 aa15.29■□□□□ 0.04
PRKCSH-209ENST00000589838 LY6HO94772 140 aa15.29■□□□□ 0.04
PRKCSH-209ENST00000589838 MGST1P10620 155 aaKnown RBP15.29■□□□□ 0.04
PRKCSH-209ENST00000589838 MMDQ15546 238 aa15.29■□□□□ 0.04
PRKCSH-209ENST00000589838 PLXNB1O43157 2135 aa15.28■□□□□ 0.04
PRKCSH-209ENST00000589838 NBR2O15453 112 aa15.28■□□□□ 0.04
PRKCSH-209ENST00000589838 IGLV2-8P01709 118 aa15.28■□□□□ 0.04
PRKCSH-209ENST00000589838 APELAP0DMC3 54 aa15.28■□□□□ 0.04
PRKCSH-209ENST00000589838 JOSD1Q15040 202 aaPredicted RBP15.28■□□□□ 0.04
PRKCSH-209ENST00000589838 IBA57Q5T440 356 aaKnown RBP15.28■□□□□ 0.04
PRKCSH-209ENST00000589838 OR5R1Q8NH85 324 aa15.28■□□□□ 0.04
PRKCSH-209ENST00000589838 FCN1O00602 326 aa15.27■□□□□ 0.04
PRKCSH-209ENST00000589838 GPR6P46095 362 aaPredicted RBP15.27■□□□□ 0.04
PRKCSH-209ENST00000589838 WDR73Q6P4I2 378 aa15.27■□□□□ 0.04
PRKCSH-209ENST00000589838 NPBQ8NG41 125 aa15.27■□□□□ 0.04
PRKCSH-209ENST00000589838 ODF3BA8MYP8 253 aa15.27■□□□□ 0.03
PRKCSH-209ENST00000589838 ADMP35318 185 aa15.27■□□□□ 0.03
PRKCSH-209ENST00000589838 OR8I2Q8N0Y5 310 aa15.27■□□□□ 0.03
PRKCSH-209ENST00000589838 KIR3DL3Q8N743 410 aa15.27■□□□□ 0.03
PRKCSH-209ENST00000589838 CHRDL1Q9BU40 450 aa15.27■□□□□ 0.03
PRKCSH-209ENST00000589838 WNT10AQ9GZT5 417 aa15.27■□□□□ 0.03
PRKCSH-209ENST00000589838 MT-ND6P03923 174 aa15.26■□□□□ 0.03
PRKCSH-209ENST00000589838 MYCNOSP40205 109 aa15.26■□□□□ 0.03
PRKCSH-209ENST00000589838 CCDC144NLQ6NUI1 221 aa15.26■□□□□ 0.03
PRKCSH-209ENST00000589838 CFHR4Q92496 578 aa15.26■□□□□ 0.03
PRKCSH-209ENST00000589838 GNB1LQ9BYB4 327 aa15.26■□□□□ 0.03
PRKCSH-209ENST00000589838 MRPL18Q9H0U6 180 aaKnown RBP15.26■□□□□ 0.03
PRKCSH-209ENST00000589838 RNASE7Q9H1E1 156 aaKnown RBP15.26■□□□□ 0.03
PRKCSH-209ENST00000589838 HIGD1AQ9Y241 93 aa15.26■□□□□ 0.03
PRKCSH-209ENST00000589838 HILPDAQ9Y5L2 63 aa15.26■□□□□ 0.03
PRKCSH-209ENST00000589838 IGHV3-21A0A0B4J1V1 117 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 OOSP1A8MZH6 123 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 I3L2K1 104 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 NDUFA3O95167 84 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 NBEAP1P0C6P0 100 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 CX3CL1P78423 397 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 LDLRAD2Q5SZI1 272 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 RUSC1-AS1Q66K80 236 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 C19orf35Q6ZS72 473 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 FAM231DQ6ZW35 169 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 BAGE2Q86Y30 109 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 GBGT1Q8N5D6 347 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 EPDR1Q9UM22 224 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 CBLN1P23435 193 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 RANP62826 216 aaKnown RBP15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 TMEM190Q8WZ59 177 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 SMIM12Q96EX1 92 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 RASL11BQ9BPW5 248 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 SERTAD4Q9NUC0 356 aa15.25■□□□□ 0.03
PRKCSH-209ENST00000589838 SLC25A5P05141 298 aaKnown RBP15.24■□□□□ 0.03
PRKCSH-209ENST00000589838 IGLC1P0CG04 106 aa15.24■□□□□ 0.03
PRKCSH-209ENST00000589838 IER3P46695 156 aa15.24■□□□□ 0.03
PRKCSH-209ENST00000589838 TMEM183BQ1AE95 376 aa15.24■□□□□ 0.03
PRKCSH-209ENST00000589838 SMIM27A0A1W2PRY6 76 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 PGPA6NDG6 321 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 ZNF705GA8MUZ8 300 aaPredicted RBP15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 UBE2G1P62253 170 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 FXYD3Q14802 87 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 BLNKQ8WV28 456 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 ADGRG4Q8IZF6 3080 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 SNURFLB1AK76 121 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 MINOS1Q5TGZ0 78 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 CDPF1Q6NVV7 123 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 PRDM13Q9H4Q3 707 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 MINOS1-NBL1R4GNA1 71 aa15.23■□□□□ 0.03
PRKCSH-209ENST00000589838 SPTA1P02549 2419 aa15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 GATCO43716 136 aaKnown RBP15.22■□□□□ 0.03
PRKCSH-209ENST00000589838 PSG1P11464 419 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms