RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 ABCA4P78363 2273 aa4.71□□□□□ -1.66
SMAD4-208ENST00000589706 A0A087WX48 190 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 TRGV8A0A0C4DH27 118 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 A0A0G2JLM5 398 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 CENPVL3A0A0U1RRI6 287 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 SH2D1BO14796 132 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 RER1O15258 196 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 ZNF737O75373 536 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 IGHV4-39P01824 125 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 DBIP07108 87 aaKnown RBP4.7□□□□□ -1.66
SMAD4-208ENST00000589706 SPINK8P0C7L1 97 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 PIRTP0C851 137 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 HIST1H1EP10412 219 aaKnown RBP4.7□□□□□ -1.66
SMAD4-208ENST00000589706 PMCHP20382 165 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 VDAC1P21796 283 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 HTR1DP28221 377 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 B3GALT5-AS1P59052 145 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 UBE2G1P62253 170 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 PSMG4Q5JS54 123 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 TIMM23BQ5SRD1 257 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 C22orf39Q6P5X5 142 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 LYPD6Q86Y78 171 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 ZADH2Q8N4Q0 377 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 TMEM251Q8N6I4 163 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 OR4F5Q8NH21 305 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 OR4A16Q8NH70 328 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 OR10D3Q8NH80 312 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 KCNG3Q8TAE7 436 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 C8orf46Q8TAG6 207 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 ZNF502Q8TBZ5 544 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 APOBEC3DQ96AK3 386 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-208ENST00000589706 RCHY1Q96PM5 261 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 FNDC4Q9H6D8 234 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-208ENST00000589706 SPANXB1Q9NS25 103 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-208ENST00000589706 IL36BQ9NZH7 164 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 TAAR3PQ9P1P4 343 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 CRLS1Q9UJA2 301 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 ZNF443Q9Y2A4 671 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-208ENST00000589706 RCL1Q9Y2P8 373 aaKnown RBP4.7□□□□□ -1.66
SMAD4-208ENST00000589706 TIMM9Q9Y5J7 89 aa4.7□□□□□ -1.66
SMAD4-208ENST00000589706 MXRA5Q9NR99 2828 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 IGLV3-16A0A075B6K0 115 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 IGLV5-45A0A087WSX0 123 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 A0A087X0K7 114 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 MDFIC2A0A1B0GVS7 189 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 GRIFINA4D1Z8 144 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 LRRC30A6NM36 301 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 M0QXV9 152 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 ERI3O43414 337 aaKnown RBP4.69□□□□□ -1.66
SMAD4-208ENST00000589706 LY6G6DO95868 133 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 APOHP02749 345 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-208ENST00000589706 ISG15P05161 165 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 SLC25A6P12236 298 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 ATP1B2P14415 290 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-208ENST00000589706 FBLP22087 321 aaKnown RBP4.69□□□□□ -1.66
SMAD4-208ENST00000589706 OR3A4PP47883 348 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 POU3F1Q03052 451 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-208ENST00000589706 SPATA31B1PQ5VZV4 182 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 RASL11AQ6T310 242 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 H2BFWTQ7Z2G1 175 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 CPEB2Q7Z5Q1 589 aaKnown RBP4.69□□□□□ -1.66
SMAD4-208ENST00000589706 BPIFA4PQ86YQ2 179 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 TMEM252Q8N6L7 170 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 MAPKAPK5-AS1Q8N8E1 139 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 OR10G9Q8NGN4 311 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 OR9G4Q8NGQ1 327 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 MRAPQ8TCY5 172 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 SCGB1C1Q8TD33 95 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 RTN4IP1Q8WWV3 396 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-208ENST00000589706 OR2A5Q96R48 311 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 GPX7Q96SL4 187 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-208ENST00000589706 NRTNQ99748 197 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 TMEM70Q9BUB7 260 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 CLEC7AQ9BXN2 247 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 SPANXDQ9BXN6 97 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 TMEM191AQ9H0A3 160 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 ZNF665Q9H7R5 613 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 NAA60Q9H7X0 242 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 WDR76Q9H967 626 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 SCRT2Q9NQ03 307 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 CSDC2Q9Y534 153 aaKnown RBP4.69□□□□□ -1.66
SMAD4-208ENST00000589706 IER3IP1Q9Y5U9 82 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 LY96Q9Y6Y9 160 aa4.69□□□□□ -1.66
SMAD4-208ENST00000589706 A0A0D9SEW6 157 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 A0A1B0GUS0 222 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 FABP5P3A8MUU1 101 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 M0R2Z0 102 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 FCN1O00602 326 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 PLPP3O14495 311 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 ISLRO14498 428 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 LYPD3O95274 346 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 UTS2O95399 124 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 HLA-DQA1P01909 254 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 KLK1P06870 262 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 OR5AL1P0C617 328 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 CT45A10P0DMU9 189 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 EVI2AP22794 236 aa4.68□□□□□ -1.66
SMAD4-208ENST00000589706 ZNF136P52737 540 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms