RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 FAM90A2PQ658T7 463 aa14.52□□□□□ -0.09
TPM4-208ENST00000588410 PRSS54Q6PEW0 395 aa14.52□□□□□ -0.09
TPM4-208ENST00000588410 WFDC3Q8IUB2 231 aa14.52□□□□□ -0.09
TPM4-208ENST00000588410 Q8WTZ3 238 aa14.52□□□□□ -0.09
TPM4-208ENST00000588410 RBKSQ9H477 322 aa14.52□□□□□ -0.09
TPM4-208ENST00000588410 NBEAL2Q6ZNJ1 2754 aa14.52□□□□□ -0.09
TPM4-208ENST00000588410 UBE2CO00762 179 aa14.51□□□□□ -0.09
TPM4-208ENST00000588410 DFFBO76075 338 aa14.51□□□□□ -0.09
TPM4-208ENST00000588410 IGKV1-17P01599 117 aa14.51□□□□□ -0.09
TPM4-208ENST00000588410 RPL35AP18077 110 aaKnown RBP14.51□□□□□ -0.09
TPM4-208ENST00000588410 OR10J1P30954 320 aa14.51□□□□□ -0.09
TPM4-208ENST00000588410 APRG1Q8IVJ8 170 aa14.51□□□□□ -0.09
TPM4-208ENST00000588410 STPG3Q8N7X2 389 aa14.51□□□□□ -0.09
TPM4-208ENST00000588410 OVOL2Q9BRP0 275 aa14.51□□□□□ -0.09
TPM4-208ENST00000588410 SRRQ9GZT4 340 aa14.51□□□□□ -0.09
TPM4-208ENST00000588410 KIR2DL5BA0A0G2JN68 375 aa14.5□□□□□ -0.09
TPM4-208ENST00000588410 KIR2DL5BA0A0G2JPC4 375 aa14.5□□□□□ -0.09
TPM4-208ENST00000588410 KIR2DL5AQ8N109 375 aa14.5□□□□□ -0.09
TPM4-208ENST00000588410 CENPSQ8N2Z9 138 aa14.5□□□□□ -0.09
TPM4-208ENST00000588410 KIR2DL5BQ8NHK3 375 aa14.5□□□□□ -0.09
TPM4-208ENST00000588410 TMEM170AQ8WVE7 144 aa14.5□□□□□ -0.09
TPM4-208ENST00000588410 ACY3Q96HD9 319 aa14.5□□□□□ -0.09
TPM4-208ENST00000588410 GRAMD2BQ96HH9 432 aa14.5□□□□□ -0.09
TPM4-208ENST00000588410 MS4A6AQ9H2W1 248 aa14.5□□□□□ -0.09
TPM4-208ENST00000588410 SFT2D2O95562 160 aa14.49□□□□□ -0.09
TPM4-208ENST00000588410 IFNA4P05014 189 aa14.49□□□□□ -0.09
TPM4-208ENST00000588410 IGLC1P0CG04 106 aa14.49□□□□□ -0.09
TPM4-208ENST00000588410 RBMS2Q15434 407 aaKnown RBP14.49□□□□□ -0.09
TPM4-208ENST00000588410 Q6ZWC4 215 aa14.49□□□□□ -0.09
TPM4-208ENST00000588410 LILRB2Q8N423 598 aa14.49□□□□□ -0.09
TPM4-208ENST00000588410 NPIPB3Q92617 1050 aa14.49□□□□□ -0.09
TPM4-208ENST00000588410 RABAC1Q9UI14 185 aa14.49□□□□□ -0.09
TPM4-208ENST00000588410 NAP1L6A6NFF2 107 aa14.48□□□□□ -0.09
TPM4-208ENST00000588410 SPRY2O43597 315 aa14.48□□□□□ -0.09
TPM4-208ENST00000588410 CRYBB3P26998 211 aa14.48□□□□□ -0.09
TPM4-208ENST00000588410 ATP5IP56385 69 aaPredicted RBP14.48□□□□□ -0.09
TPM4-208ENST00000588410 YPEL3P61236 119 aaPredicted RBP14.48□□□□□ -0.09
TPM4-208ENST00000588410 PPP1R1AQ13522 171 aa14.48□□□□□ -0.09
TPM4-208ENST00000588410 LRTM2Q8N967 370 aa14.48□□□□□ -0.09
TPM4-208ENST00000588410 MAP6D1Q9H9H5 199 aa14.48□□□□□ -0.09
TPM4-208ENST00000588410 TP53TG1Q9Y2A0 90 aa14.48□□□□□ -0.09
TPM4-208ENST00000588410 TMED3Q9Y3Q3 217 aa14.48□□□□□ -0.09
TPM4-208ENST00000588410 TRAV2A0A0B4J234 112 aa14.47□□□□□ -0.09
TPM4-208ENST00000588410 P2RY1P47900 373 aa14.47□□□□□ -0.09
TPM4-208ENST00000588410 EIF2B2P49770 351 aaKnown RBP14.47□□□□□ -0.09
TPM4-208ENST00000588410 DEFB135Q30KP9 77 aa14.47□□□□□ -0.09
TPM4-208ENST00000588410 LINC00854A0A1B0GVQ3 168 aa14.46□□□□□ -0.09
TPM4-208ENST00000588410 CENPXA8MT69 81 aa14.46□□□□□ -0.09
TPM4-208ENST00000588410 MED6O75586 246 aa14.46□□□□□ -0.09
TPM4-208ENST00000588410 RD3LP0DJH9 198 aa14.46□□□□□ -0.09
TPM4-208ENST00000588410 SLC25A6P12236 298 aa14.46□□□□□ -0.09
TPM4-208ENST00000588410 ZNF124Q15973 351 aa14.46□□□□□ -0.09
TPM4-208ENST00000588410 BAK1Q16611 211 aa14.46□□□□□ -0.09
TPM4-208ENST00000588410 STXBP6Q8NFX7 210 aa14.46□□□□□ -0.09
TPM4-208ENST00000588410 NDUFA13Q9P0J0 144 aa14.46□□□□□ -0.09
TPM4-208ENST00000588410 PAIP2BQ9ULR5 123 aaKnown RBP14.46□□□□□ -0.09
TPM4-208ENST00000588410 RYR3Q15413 4870 aa14.45□□□□□ -0.1
TPM4-208ENST00000588410 PITX3O75364 302 aa14.45□□□□□ -0.1
TPM4-208ENST00000588410 IL4P05112 153 aa14.45□□□□□ -0.1
TPM4-208ENST00000588410 HNRNPCP07910 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
TPM4-208ENST00000588410 HOXB5P09067 269 aa14.45□□□□□ -0.1
TPM4-208ENST00000588410 IAPPP10997 89 aa14.45□□□□□ -0.1
TPM4-208ENST00000588410 UBE2MP61081 183 aaKnown RBP14.45□□□□□ -0.1
TPM4-208ENST00000588410 RAB11AP62491 216 aa14.45□□□□□ -0.1
TPM4-208ENST00000588410 SLC35E1Q96K37 410 aa14.45□□□□□ -0.1
TPM4-208ENST00000588410 CSTL1Q9H114 145 aa14.45□□□□□ -0.1
TPM4-208ENST00000588410 DNAH7Q8WXX0 4024 aa14.45□□□□□ -0.1
TPM4-208ENST00000588410 HELTA6NFD8 242 aa14.44□□□□□ -0.1
TPM4-208ENST00000588410 MPTX1A8MV57 137 aa14.44□□□□□ -0.1
TPM4-208ENST00000588410 FAM90A26D6RGX4 464 aa14.44□□□□□ -0.1
TPM4-208ENST00000588410 NDUFB6O95139 128 aa14.44□□□□□ -0.1
TPM4-208ENST00000588410 TOMM40O96008 361 aa14.44□□□□□ -0.1
TPM4-208ENST00000588410 GPX4P36969 197 aaPredicted RBP14.44□□□□□ -0.1
TPM4-208ENST00000588410 DEFB131AP59861 70 aa14.44□□□□□ -0.1
TPM4-208ENST00000588410 RPP30P78346 268 aaKnown RBP14.44□□□□□ -0.1
TPM4-208ENST00000588410 RNF183Q96D59 192 aa14.44□□□□□ -0.1
TPM4-208ENST00000588410 CIB3Q96Q77 187 aaPredicted RBP14.44□□□□□ -0.1
TPM4-208ENST00000588410 ZFP92A6NM28 416 aa14.43□□□□□ -0.1
TPM4-208ENST00000588410 LEMD1Q68G75 181 aa14.43□□□□□ -0.1
TPM4-208ENST00000588410 FABP1P07148 127 aa14.42□□□□□ -0.1
TPM4-208ENST00000588410 AP2S1P53680 142 aaPredicted RBP14.42□□□□□ -0.1
TPM4-208ENST00000588410 GGNBP1Q5YKI7 109 aa14.42□□□□□ -0.1
TPM4-208ENST00000588410 COQ8AQ8NI60 647 aa14.42□□□□□ -0.1
TPM4-208ENST00000588410 C7orf50Q9BRJ6 194 aaKnown RBP14.42□□□□□ -0.1
TPM4-208ENST00000588410 PFDN2Q9UHV9 154 aa14.42□□□□□ -0.1
TPM4-208ENST00000588410 U3KQE9 123 aa14.42□□□□□ -0.1
TPM4-208ENST00000588410 A0A0J9YWU9 116 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 C9orf170A2RU37 121 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 SYNGR2O43760 224 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 PSG1P11464 419 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 DHRS2Q13268 280 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 GAMTQ14353 236 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 USF2Q15853 346 aaPredicted RBP14.41□□□□□ -0.1
TPM4-208ENST00000588410 C16orf54Q6UWD8 224 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 LYG2Q86SG7 212 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 STHQ8IWL8 128 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 FAM24BQ8N5W8 94 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 OR51G1Q8NGK1 321 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 PBDC1Q9BVG4 233 aa14.41□□□□□ -0.1
TPM4-208ENST00000588410 MAGT1Q9H0U3 335 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms