RNA–Protein interactions for RNA: ENST00000588323.1

VPS4B-203, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 3

Gene VPS4B, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-203ENST00000588323 HSPB8Q9UJY1 196 aa1.89□□□□□ -2.11
VPS4B-203ENST00000588323 PYCARDQ9ULZ3 195 aa1.89□□□□□ -2.11
VPS4B-203ENST00000588323 ZNF706Q9Y5V0 76 aaPredicted RBP1.89□□□□□ -2.11
VPS4B-203ENST00000588323 POLEQ07864 2286 aa1.89□□□□□ -2.11
VPS4B-203ENST00000588323 ZNF469Q96JG9 3925 aaPredicted RBP1.88□□□□□ -2.11
VPS4B-203ENST00000588323 ANK2Q01484 3957 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 NOTCH1P46531 2555 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 IGLV4-69A0A075B6H9 119 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 A0A0D9SFI3 127 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 C9orf170A2RU37 121 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 TMEM189A5PLL7 270 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 PRORSD1PA6NEY8 169 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 OR4C46A6NHA9 309 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 J3QR89 54 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 LGALS9O00182 355 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 TP53I11O14683 189 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 GNG7O60262 68 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 GADD45GO95257 159 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 GPR75O95800 540 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 HAND1O96004 215 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 IFNA17P01571 189 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 C1QBP02746 253 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 C1QCP02747 245 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 C8GP07360 202 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 IL3P08700 152 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 CD79AP11912 226 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 GABRA1P14867 456 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 FGF7P21781 194 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 SELENOWP63302 87 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 ATP5G2Q06055 141 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 BTN1A1Q13410 526 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 PAFAH1B3Q15102 231 aaKnown RBP1.88□□□□□ -2.11
VPS4B-203ENST00000588323 PLPPR5Q32ZL2 321 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 DNLZQ5SXM8 178 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 TMEM215Q68D42 235 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 OR10K2Q6IF99 312 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 MORN3Q6PF18 240 aaPredicted RBP1.88□□□□□ -2.11
VPS4B-203ENST00000588323 AGTRAPQ6RW13 159 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 SCIMPQ6UWF3 145 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 Q6ZR03 302 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 SHISA6Q6ZSJ9 500 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 ZNF767PQ75MW2 155 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 LRRC28Q86X40 367 aaPredicted RBP1.88□□□□□ -2.11
VPS4B-203ENST00000588323 CALHM3Q86XJ0 350 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 PDZD9Q8IXQ8 264 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 SLC35F6Q8N357 371 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 ZDHHC22Q8N966 263 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 ZIC4Q8N9L1 334 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 OR4E2Q8NGC2 313 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 OR2K2Q8NGT1 345 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 GNPDA2Q8TDQ7 276 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 SFT2D1Q8WV19 159 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 CANT1Q8WVQ1 401 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 ARL11Q969Q4 196 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 SLC25A46Q96AG3 418 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 BORCS7Q96B45 105 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 TP53RKQ96S44 253 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 PRSS27Q9BQR3 290 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 HSPB9Q9BQS6 159 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 GINS3Q9BRX5 216 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 MARVELD1Q9BSK0 173 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 TMEM70Q9BUB7 260 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 C1orf50Q9BV19 199 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 TMEM126AQ9H061 195 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 ABCG5Q9H222 651 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 CACYBPQ9HB71 228 aaKnown RBP1.88□□□□□ -2.11
VPS4B-203ENST00000588323 JPT1Q9UK76 154 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 SSR3Q9UNL2 185 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 POMPQ9Y244 141 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 BTRCQ9Y297 605 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 U3KQ87 197 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 U3KQA8 63 aa1.88□□□□□ -2.11
VPS4B-203ENST00000588323 NUP210Q8TEM1 1887 aaPredicted RBP1.88□□□□□ -2.11
VPS4B-203ENST00000588323 MYH7P12883 1935 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 KIAA1549LQ6ZVL6 1849 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 IGLV3-16A0A075B6K0 115 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 BORCS7-ASMTA0A0B4J1R7 106 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 IGHV1-3A0A0C4DH29 117 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 SPRR5A0A1B0GTR4 108 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 PNMA8CA0A1B0GUJ8 204 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 TMEM218A2RU14 115 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 TRAPPC13A5PLN9 417 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 GMNCA6NCL1 334 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 OR5H14A6NHG9 310 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 I3L521 148 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 OR7C2O60412 319 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 NDUFC2O95298 119 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 TACC2O95359 2948 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 IGF2P01344 180 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 CISD3P0C7P0 127 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 MPC1LP0DKB6 136 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 CDK2P24941 298 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 S100A2P29034 98 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 AGTR1P30556 359 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 GLRXP35754 106 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 OR1E2P47887 323 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 NUDT2P50583 147 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 RAB5BP61020 215 aa1.87□□□□□ -2.11
VPS4B-203ENST00000588323 MAXP61244 160 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms