RNA–Protein interactions for RNA: ENST00000586975.1

CLPTM1-206, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-206ENST00000586975 SUPT4H1P63272 117 aaKnown RBP14.06□□□□□ -0.16
CLPTM1-206ENST00000586975 KLF9Q13886 244 aaPredicted RBP14.06□□□□□ -0.16
CLPTM1-206ENST00000586975 PRSS54Q6PEW0 395 aa14.06□□□□□ -0.16
CLPTM1-206ENST00000586975 LYG2Q86SG7 212 aa14.06□□□□□ -0.16
CLPTM1-206ENST00000586975 LGI3Q8N145 548 aa14.06□□□□□ -0.16
CLPTM1-206ENST00000586975 ACY3Q96HD9 319 aa14.06□□□□□ -0.16
CLPTM1-206ENST00000586975 CSTL1Q9H114 145 aa14.06□□□□□ -0.16
CLPTM1-206ENST00000586975 A0A0B4J2A0 478 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 CXorf65A6NEN9 183 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 JTBO76095 146 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 SLC25A4P12235 298 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 OR10J1P30954 320 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 CCR6P51684 374 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 DEFB131AP59861 70 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 TNFRSF9Q07011 255 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 SMCO1Q147U7 214 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 LEMD1Q68G75 181 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 NOXA1Q86UR1 476 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 STXBP6Q8NFX7 210 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 OR1S2Q8NGQ3 325 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 OR1S1Q8NH92 325 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 Q8WTZ3 238 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 RNF183Q96D59 192 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 CACFD1Q9UGQ2 172 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 SHPKQ9UHJ6 478 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 V9GYH0 126 aa14.05□□□□□ -0.16
CLPTM1-206ENST00000586975 MPTX1A8MV57 137 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 IGLC1P0CG04 106 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 P2RY1P47900 373 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 SRPXP78539 464 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 RBMS2Q15434 407 aaKnown RBP14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 NMSQ5H8A3 153 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 ETFRF1Q6IPR1 90 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 FAM24BQ8N5W8 94 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 DTD1Q8TEA8 209 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 TMEM170AQ8WVE7 144 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 NPIPB3Q92617 1050 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 TRIM63Q969Q1 353 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 RBKSQ9H477 322 aa14.04□□□□□ -0.16
CLPTM1-206ENST00000586975 VAMP1P23763 118 aa14.03□□□□□ -0.16
CLPTM1-206ENST00000586975 CRYBB3P26998 211 aa14.03□□□□□ -0.16
CLPTM1-206ENST00000586975 EWSR1Q01844 656 aaKnown RBP eCLIP14.03□□□□□ -0.16
CLPTM1-206ENST00000586975 GRAMD2BQ96HH9 432 aa14.03□□□□□ -0.16
CLPTM1-206ENST00000586975 IFNA4P05014 189 aa14.02□□□□□ -0.17
CLPTM1-206ENST00000586975 ZNF79Q15937 498 aa14.02□□□□□ -0.17
CLPTM1-206ENST00000586975 LYSTQ99698 3801 aa14.02□□□□□ -0.17
CLPTM1-206ENST00000586975 HSPB7Q9UBY9 170 aa14.02□□□□□ -0.17
CLPTM1-206ENST00000586975 U3KQ87 197 aa14.02□□□□□ -0.17
CLPTM1-206ENST00000586975 DNAH1Q9P2D7 4330 aa14.02□□□□□ -0.17
CLPTM1-206ENST00000586975 IL4P05112 153 aa14.01□□□□□ -0.17
CLPTM1-206ENST00000586975 HNRNPCP07910 306 aaKnown RBP eCLIP14.01□□□□□ -0.17
CLPTM1-206ENST00000586975 YPEL3P61236 119 aaPredicted RBP14.01□□□□□ -0.17
CLPTM1-206ENST00000586975 TMEM128Q5BJH2 165 aa14.01□□□□□ -0.17
CLPTM1-206ENST00000586975 TRAV2A0A0B4J234 112 aa14□□□□□ -0.17
CLPTM1-206ENST00000586975 CA1P00915 261 aaPredicted RBP14□□□□□ -0.17
CLPTM1-206ENST00000586975 RD3LP0DJH9 198 aa14□□□□□ -0.17
CLPTM1-206ENST00000586975 STHQ8IWL8 128 aa14□□□□□ -0.17
CLPTM1-206ENST00000586975 RARRES2Q99969 163 aa14□□□□□ -0.17
CLPTM1-206ENST00000586975 PAIP2BQ9ULR5 123 aaKnown RBP14□□□□□ -0.17
CLPTM1-206ENST00000586975 PIGBOS1A0A0B4J2F0 54 aa13.99□□□□□ -0.17
CLPTM1-206ENST00000586975 ZNF688P0C7X2 276 aa13.99□□□□□ -0.17
CLPTM1-206ENST00000586975 IAPPP10997 89 aa13.99□□□□□ -0.17
CLPTM1-206ENST00000586975 INPP1P49441 399 aa13.99□□□□□ -0.17
CLPTM1-206ENST00000586975 EIF2B2P49770 351 aaKnown RBP13.99□□□□□ -0.17
CLPTM1-206ENST00000586975 SPANXN2Q5MJ10 180 aa13.99□□□□□ -0.17
CLPTM1-206ENST00000586975 CCDC190Q86UF4 302 aa13.99□□□□□ -0.17
CLPTM1-206ENST00000586975 SLC25A21Q9BQT8 299 aaPredicted RBP13.99□□□□□ -0.17
CLPTM1-206ENST00000586975 RBM38Q9H0Z9 239 aaKnown RBP13.99□□□□□ -0.17
CLPTM1-206ENST00000586975 HELTA6NFD8 242 aa13.98□□□□□ -0.17
CLPTM1-206ENST00000586975 K7EQG2 157 aa13.98□□□□□ -0.17
CLPTM1-206ENST00000586975 DHRS2Q13268 280 aa13.98□□□□□ -0.17
CLPTM1-206ENST00000586975 USF2Q15853 346 aaPredicted RBP13.98□□□□□ -0.17
CLPTM1-206ENST00000586975 TMEM217Q8N7C4 229 aa13.98□□□□□ -0.17
CLPTM1-206ENST00000586975 OR11H2Q8NH07 326 aa13.98□□□□□ -0.17
CLPTM1-206ENST00000586975 DUXBA0A1W2PPF3 345 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 KNCNA6PVL3 124 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 TOMM40O96008 361 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 HOXB5P09067 269 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 PSG1P11464 419 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 PPP1R1AQ13522 171 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 C16orf54Q6UWD8 224 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 CENPSQ8N2Z9 138 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 OR51G1Q8NGK1 321 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 GATAD1Q8WUU5 269 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 SLC35E1Q96K37 410 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 PBDC1Q9BVG4 233 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 U3KQE9 123 aa13.97□□□□□ -0.17
CLPTM1-206ENST00000586975 LINC00854A0A1B0GVQ3 168 aa13.96□□□□□ -0.17
CLPTM1-206ENST00000586975 ZFP92A6NM28 416 aa13.96□□□□□ -0.17
CLPTM1-206ENST00000586975 SFT2D2O95562 160 aa13.96□□□□□ -0.17
CLPTM1-206ENST00000586975 TRIQKQ629K1 86 aa13.96□□□□□ -0.17
CLPTM1-206ENST00000586975 DCANP1Q8TF63 244 aa13.96□□□□□ -0.17
CLPTM1-206ENST00000586975 PLECQ15149 4684 aaKnown RBP13.96□□□□□ -0.17
CLPTM1-206ENST00000586975 NUPR2A6NF83 97 aa13.95□□□□□ -0.18
CLPTM1-206ENST00000586975 AP2S1P53680 142 aaPredicted RBP13.95□□□□□ -0.18
CLPTM1-206ENST00000586975 ATP5IP56385 69 aaPredicted RBP13.95□□□□□ -0.18
CLPTM1-206ENST00000586975 RAB11AP62491 216 aa13.95□□□□□ -0.18
CLPTM1-206ENST00000586975 GAMTQ14353 236 aa13.95□□□□□ -0.18
CLPTM1-206ENST00000586975 GLMPQ8WWB7 406 aa13.95□□□□□ -0.18
CLPTM1-206ENST00000586975 DEDD2Q8WXF8 326 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms