RNA–Protein interactions for RNA: ENST00000586245.5

VMP1-203, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-203ENST00000586245 CTSGP08311 255 aa10.47□□□□□ -0.73
VMP1-203ENST00000586245 OR10J1P30954 320 aa10.47□□□□□ -0.73
VMP1-203ENST00000586245 SLURP1P55000 103 aa10.47□□□□□ -0.73
VMP1-203ENST00000586245 NHLH2Q02577 135 aa10.47□□□□□ -0.73
VMP1-203ENST00000586245 ARL16Q0P5N6 197 aa10.47□□□□□ -0.73
VMP1-203ENST00000586245 ATP6V1FQ16864 119 aa10.47□□□□□ -0.73
VMP1-203ENST00000586245 ZNF546Q86UE3 836 aa10.47□□□□□ -0.73
VMP1-203ENST00000586245 HAPLN4Q86UW8 402 aa10.47□□□□□ -0.73
VMP1-203ENST00000586245 OR1S2Q8NGQ3 325 aa10.47□□□□□ -0.73
VMP1-203ENST00000586245 CHRDL1Q9BU40 450 aa10.47□□□□□ -0.73
VMP1-203ENST00000586245 ZFP92A6NM28 416 aa10.46□□□□□ -0.73
VMP1-203ENST00000586245 SMLR1H3BR10 107 aa10.46□□□□□ -0.73
VMP1-203ENST00000586245 IGLC1P0CG04 106 aa10.46□□□□□ -0.73
VMP1-203ENST00000586245 FAM106AQ4KMX7 169 aa10.46□□□□□ -0.73
VMP1-203ENST00000586245 TMEM144Q7Z5S9 345 aa10.46□□□□□ -0.73
VMP1-203ENST00000586245 INO80EQ8NBZ0 244 aaPredicted RBP10.46□□□□□ -0.73
VMP1-203ENST00000586245 ST6GAL2Q96JF0 529 aa10.46□□□□□ -0.73
VMP1-203ENST00000586245 TMEM147Q9BVK8 224 aa10.46□□□□□ -0.73
VMP1-203ENST00000586245 NPVFQ9HCQ7 196 aa10.46□□□□□ -0.73
VMP1-203ENST00000586245 UQCC1Q9NVA1 299 aa10.46□□□□□ -0.73
VMP1-203ENST00000586245 HSPB11Q9Y547 144 aa10.46□□□□□ -0.73
VMP1-203ENST00000586245 IGHV3-35A0A0C4DH35 117 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 FABP1P07148 127 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 ADMP35318 185 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 SYNJ2BPP57105 145 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 KLF5Q13887 457 aaPredicted RBP10.45□□□□□ -0.74
VMP1-203ENST00000586245 TIGITQ495A1 244 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 ZNF600Q6ZNG1 722 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 GPHB5Q86YW7 130 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 C1QL4Q86Z23 238 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 TCTE3Q8IZS6 198 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 LINC00482Q8N8I6 264 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 THAP8Q8NA92 274 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 OR5C1Q8NGR4 320 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 DLX4Q92988 240 aaPredicted RBP10.45□□□□□ -0.74
VMP1-203ENST00000586245 AQP10Q96PS8 301 aa10.45□□□□□ -0.74
VMP1-203ENST00000586245 ZNF320A2RRD8 509 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 G3V3Q6 166 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 NDUFA4O00483 81 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 OVOL1O14753 267 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 YIF1AO95070 293 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 IGKV1-17P01599 117 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 CD33P20138 364 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 YPEL3P61236 119 aaPredicted RBP10.44□□□□□ -0.74
VMP1-203ENST00000586245 CLINT1Q14677 625 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 TEPPQ6URK8 271 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 Q8WTZ3 238 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 TRGV9Q99603 122 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 PEMTQ9UBM1 199 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 TNFSF18Q9UNG2 199 aa10.44□□□□□ -0.74
VMP1-203ENST00000586245 IGKV1D-37A0A075B6S9 117 aa10.43□□□□□ -0.74
VMP1-203ENST00000586245 UBE2L5PA0A1B0GUS4 154 aa10.43□□□□□ -0.74
VMP1-203ENST00000586245 DFFBO76075 338 aa10.43□□□□□ -0.74
VMP1-203ENST00000586245 RD3LP0DJH9 198 aa10.43□□□□□ -0.74
VMP1-203ENST00000586245 RAB31Q13636 194 aa10.43□□□□□ -0.74
VMP1-203ENST00000586245 VWC2Q2TAL6 325 aa10.43□□□□□ -0.74
VMP1-203ENST00000586245 TREML4Q6UXN2 200 aa10.43□□□□□ -0.74
VMP1-203ENST00000586245 REC114Q7Z4M0 266 aa10.43□□□□□ -0.74
VMP1-203ENST00000586245 ATP5SQ99766 215 aa10.43□□□□□ -0.74
VMP1-203ENST00000586245 UFC1Q9Y3C8 167 aa10.43□□□□□ -0.74
VMP1-203ENST00000586245 PUS1Q9Y606 427 aaKnown RBP eCLIP10.43□□□□□ -0.74
VMP1-203ENST00000586245 LGALS9O00182 355 aa10.42□□□□□ -0.74
VMP1-203ENST00000586245 ARPC5O15511 151 aa10.42□□□□□ -0.74
VMP1-203ENST00000586245 TOMM40O96008 361 aa10.42□□□□□ -0.74
VMP1-203ENST00000586245 AP2S1P53680 142 aaPredicted RBP10.42□□□□□ -0.74
VMP1-203ENST00000586245 OR9G4Q8NGQ1 327 aa10.42□□□□□ -0.74
VMP1-203ENST00000586245 TMEM190Q8WZ59 177 aa10.42□□□□□ -0.74
VMP1-203ENST00000586245 C20orf24Q9BUV8 137 aa10.42□□□□□ -0.74
VMP1-203ENST00000586245 ELOVL1Q9BW60 279 aa10.42□□□□□ -0.74
VMP1-203ENST00000586245 SMIM3Q9BZL3 60 aa10.42□□□□□ -0.74
VMP1-203ENST00000586245 MFFQ9GZY8 342 aa10.42□□□□□ -0.74
VMP1-203ENST00000586245 WDR83OSQ9Y284 106 aa10.42□□□□□ -0.74
VMP1-203ENST00000586245 TRRAPQ9Y4A5 3859 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 IGKV1OR2-108A0A075B7D4 117 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 RNF222A6NCQ9 220 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 HMSDA8MTL9 139 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 IFNA5P01569 189 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 SELENOTP62341 195 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 ZNF90Q03938 601 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 PRR31Q5SQ13 230 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 BTNL8Q6UX41 500 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 TOMM20LQ6UXN7 152 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 UNQ9165/PRO28630Q6UXU0 137 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 CYP2G1PQ6ZSU1 146 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 WFDC9Q8NEX5 89 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 BPIFCQ8NFQ6 507 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 OR51G1Q8NGK1 321 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 GINS3Q9BRX5 216 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 MCRIP2Q9BUT9 160 aaKnown RBP10.41□□□□□ -0.74
VMP1-203ENST00000586245 FBXL17Q9UF56 701 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 DNHD1Q96M86 4753 aa10.41□□□□□ -0.74
VMP1-203ENST00000586245 MPDU1O75352 247 aa10.4□□□□□ -0.74
VMP1-203ENST00000586245 CFDP00746 253 aaPredicted RBP10.4□□□□□ -0.74
VMP1-203ENST00000586245 C1QBP02746 253 aa10.4□□□□□ -0.74
VMP1-203ENST00000586245 IL4P05112 153 aa10.4□□□□□ -0.74
VMP1-203ENST00000586245 PSG1P11464 419 aa10.4□□□□□ -0.74
VMP1-203ENST00000586245 FGF7P21781 194 aa10.4□□□□□ -0.74
VMP1-203ENST00000586245 ELLP55199 621 aaPredicted RBP10.4□□□□□ -0.74
VMP1-203ENST00000586245 OR2F1Q13607 317 aa10.4□□□□□ -0.74
VMP1-203ENST00000586245 OR11H4Q8NGC9 324 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms