RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 LSM10Q969L4 123 aaKnown RBP8.52□□□□□ -1.05
LIG3-207ENST00000586119 RRNAD1Q96FB5 475 aaKnown RBP8.52□□□□□ -1.05
LIG3-207ENST00000586119 SEC22AQ96IW7 307 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 RARRES2Q99969 163 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 SRSF8Q9BRL6 282 aaKnown RBP8.52□□□□□ -1.05
LIG3-207ENST00000586119 RHPN1-AS1Q9BWJ2 59 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 CSTL1Q9H114 145 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 FKBP11Q9NYL4 201 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 CACFD1Q9UGQ2 172 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 OR51B2Q9Y5P1 312 aa8.52□□□□□ -1.05
LIG3-207ENST00000586119 TRAV6A0A075B6T7 132 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 A0A0B4J2A0 478 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 IGHV7-4-1A0A0J9YVY3 117 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 C9orf170A2RU37 121 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 OR4C46A6NHA9 309 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 PRAF2O60831 178 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 SNAPC5O75971 98 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 APOHP02749 345 aaPredicted RBP8.51□□□□□ -1.05
LIG3-207ENST00000586119 ANXA7P20073 488 aaKnown RBP8.51□□□□□ -1.05
LIG3-207ENST00000586119 AKR1C2P52895 323 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 DHRS2Q13268 280 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 C4orf46Q504U0 113 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 TMEM268Q5VZI3 342 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 FAM90A2PQ658T7 463 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 THOC7Q6I9Y2 204 aaKnown RBP8.51□□□□□ -1.05
LIG3-207ENST00000586119 SPSB3Q6PJ21 355 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 OR11H2Q8NH07 326 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 COQ8AQ8NI60 647 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 MARVELD1Q9BSK0 173 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 SHPKQ9UHJ6 478 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 PRNDQ9UKY0 176 aa8.51□□□□□ -1.05
LIG3-207ENST00000586119 IGHV3-66A0A0C4DH42 116 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 C15orf62A8K5M9 175 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 MPTX1A8MV57 137 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 INMT-MINDY4F8WBC2 141 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 YIF1AO95070 293 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 IGKV1-5P01602 117 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 P0C879 139 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 LEMD1Q68G75 181 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 FAM24BQ8N5W8 94 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 TMEM116Q8NCL8 245 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 RNASE11Q8TAA1 199 aaKnown RBP8.5□□□□□ -1.05
LIG3-207ENST00000586119 LHFPL5Q8TAF8 219 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 C11orf45Q8TAV5 145 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 GPN1Q9HCN4 374 aaPredicted RBP8.5□□□□□ -1.05
LIG3-207ENST00000586119 TMED3Q9Y3Q3 217 aa8.5□□□□□ -1.05
LIG3-207ENST00000586119 DNAH17Q9UFH2 4485 aa8.49□□□□□ -1.05
LIG3-207ENST00000586119 I3L2K1 104 aa8.49□□□□□ -1.05
LIG3-207ENST00000586119 SLC25A6P12236 298 aa8.49□□□□□ -1.05
LIG3-207ENST00000586119 HSD17B13Q7Z5P4 300 aaPredicted RBP8.49□□□□□ -1.05
LIG3-207ENST00000586119 TMEM217Q8N7C4 229 aa8.49□□□□□ -1.05
LIG3-207ENST00000586119 SLC35G3Q8N808 338 aa8.49□□□□□ -1.05
LIG3-207ENST00000586119 OR4A16Q8NH70 328 aa8.49□□□□□ -1.05
LIG3-207ENST00000586119 ZNF431Q8TF32 576 aaPredicted RBP8.49□□□□□ -1.05
LIG3-207ENST00000586119 MITD1Q8WV92 249 aa8.49□□□□□ -1.05
LIG3-207ENST00000586119 MISP3Q96FF7 219 aa8.49□□□□□ -1.05
LIG3-207ENST00000586119 TRAV14DV4A0A0A6YYC5 116 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 A0A1B0GU03 582 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 C15orf61A6NNL5 157 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 SNRPGP15A8MWD9 76 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 NUPL2O15504 423 aaKnown RBP8.48□□□□□ -1.05
LIG3-207ENST00000586119 CYB5BO43169 146 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 IZUMO4Q1ZYL8 232 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 AARDQ4LEZ3 155 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 SPINK9Q5DT21 86 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 NMSQ5H8A3 153 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 ST8SIA2Q92186 375 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 OR10C1Q96KK4 312 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 TMEM14BQ9NUH8 114 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 APLNQ9ULZ1 77 aa8.48□□□□□ -1.05
LIG3-207ENST00000586119 ATP6V1G1O75348 118 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 DFFBO76075 338 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 MT-CO2P00403 227 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 CA1P00915 261 aaPredicted RBP8.47□□□□□ -1.05
LIG3-207ENST00000586119 IFNA21P01568 189 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 MFAP4P55083 255 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 DEFB131AP59861 70 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 HSPE1P61604 102 aaKnown RBP8.47□□□□□ -1.05
LIG3-207ENST00000586119 TOMM20LQ6UXN7 152 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 TCF24Q7RTU0 167 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 LYZL2Q7Z4W2 148 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 C12orf45Q8N5I9 185 aaPredicted RBP8.47□□□□□ -1.05
LIG3-207ENST00000586119 OR52E5Q8NH55 327 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 CHAC2Q8WUX2 184 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 PINX1Q96BK5 328 aaKnown RBP8.47□□□□□ -1.05
LIG3-207ENST00000586119 GPR146Q96CH1 333 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.47□□□□□ -1.05
LIG3-207ENST00000586119 PRR13Q9NZ81 148 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 FAT2Q9NYQ8 4349 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 DNAH2Q9P225 4427 aa8.47□□□□□ -1.05
LIG3-207ENST00000586119 A0A0B4J293 547 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 A0A0G2JRQ6 117 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 IGLL5B9A064 214 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 BOLA2-SMG1P6H3BVE0 249 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 IFNA4P05014 189 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 GIG44P09565 113 aaPredicted RBP8.46□□□□□ -1.06
LIG3-207ENST00000586119 RBMY1A1P0DJD3 496 aaKnown RBP8.46□□□□□ -1.06
LIG3-207ENST00000586119 RBMY1CP0DJD4 496 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 SULT1A3P0DMM9 295 aa8.46□□□□□ -1.06
LIG3-207ENST00000586119 SULT1A4P0DMN0 295 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms