RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 MRPL41Q8IXM3 137 aaKnown RBP12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 LINC00311Q8N616 119 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 OR10X1Q8NGY0 326 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 VSTM2AQ8TAG5 236 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 OSTCQ9NRP0 149 aa12.04□□□□□ -0.48
CDK5RAP3-236ENST00000584991 VPS13CQ709C8 3753 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 NBPF19A0A087WUL8 3843 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 IGHV2-26A0A0B4J1V2 119 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 A0A1W2PN81 502 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 FOXH1O75593 365 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 MT-ND6P03923 174 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 COX7A1P24310 79 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 SSTP61278 116 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 CD69Q07108 199 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 OR5AN1Q8NGI8 311 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 GNB1LQ9BYB4 327 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 LPAR2Q9HBW0 351 aa12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ANKRD17O75179 2603 aaKnown RBP12.03□□□□□ -0.48
CDK5RAP3-236ENST00000584991 CENPEQ02224 2701 aa12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 IGHV2-70DA0A0C4DH43 119 aa12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 RNASE2P10153 161 aaKnown RBP12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 GNG4P50150 75 aa12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 LGALS4P56470 323 aa12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 RANP62826 216 aaKnown RBP12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 WDR73Q6P4I2 378 aa12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 ZNF664Q8N3J9 261 aa12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 NDUFAF3Q9BU61 184 aa12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 CLEC7AQ9BXN2 247 aa12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 COMMD5Q9GZQ3 224 aa12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 NDUFA4L2Q9NRX3 87 aa12.02□□□□□ -0.48
CDK5RAP3-236ENST00000584991 WNK2Q9Y3S1 2297 aa12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ASH1LQ9NR48 2969 aaKnown RBP12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 PGPEP1LA6NFU8 196 aa12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 PRRX1P54821 245 aa12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 Q0VG73 95 aa12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 PSG5Q15238 335 aa12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 SPATA31B1PQ5VZV4 182 aa12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 MIR17HGQ75NE6 70 aa12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 KIR3DL3Q8N743 410 aa12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TMEM186Q96B77 213 aa12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 HINT2Q9BX68 163 aa12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 AURKAIP1Q9NWT8 199 aaPredicted RBP12.02□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TNCP24821 2201 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 K7EN84 100 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ISLRO14498 428 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 C8orf88P0DMB2 117 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 SLC25A16P16260 332 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 SUB1P53999 127 aaKnown RBP eCLIP12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 RAB4BP61018 213 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 DIAPH2-AS1Q14236 149 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 HLA-DRB5Q30154 266 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TIGITQ495A1 244 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 PDPNQ86YL7 162 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 OR4C13Q8NGP0 309 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TMEM167AQ8TBQ9 72 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 C2orf88Q9BSF0 95 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 SLC25A33Q9BSK2 321 aa12.01□□□□□ -0.49
CDK5RAP3-236ENST00000584991 POLQO75417 2590 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ABCA2Q9BZC7 2435 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 SRRM4A7MD48 611 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ZNF705GA8MUZ8 300 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 IGLV1-47P01700 117 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 IGKV1-16P04430 117 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 SAA1P0DJI8 122 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 PRTN3P24158 256 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 OR10J1P30954 320 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ADMP35318 185 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TAS2R60P59551 318 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ERVFC1-1P60608 527 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 RPL8P62917 257 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 C1orf122Q6ZSJ8 110 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 VMO1Q7Z5L0 202 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 MMD2Q8IY49 270 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 LRRC75A-AS1Q8N1F1 130 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TNFRSF14Q92956 283 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 PRO1933Q9H354 126 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 V9GYV3 84 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ABCA12Q86UK0 2595 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 REG1BP48304 166 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 TPPP2P59282 170 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 KLRD1Q13241 179 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ZNF600Q6ZNG1 722 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 OR1L4Q8NGR5 311 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ST6GALNAC6Q969X2 333 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 FLYWCH2Q96CP2 140 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 MRPL20Q9BYC9 149 aaKnown RBP12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 SIRPDQ9H106 197 aa12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 POLR3KQ9Y2Y1 108 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-236ENST00000584991 IGKV1OR2-108A0A075B7D4 117 aa11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 H0YJW9 148 aa11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 MC5RP33032 325 aa11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 ZNF137PP52743 207 aa11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 CX3CL1P78423 397 aa11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 HCP5Q6MZN7 132 aa11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 CMTM2Q8TAZ6 248 aa11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 MS4A10Q96PG2 267 aa11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 MRPL18Q9H0U6 180 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 DNAJC4Q9NNZ3 241 aa11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 GCN1Q92616 2671 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-236ENST00000584991 CRISP2P16562 243 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms