RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 UXS1Q8NBZ7 420 aa7.56□□□□□ -1.2
GGA3-219ENST00000584550 BSCL2Q96G97 398 aaPredicted RBP7.56□□□□□ -1.2
GGA3-219ENST00000584550 CHRDL1Q9BU40 450 aa7.56□□□□□ -1.2
GGA3-219ENST00000584550 C20orf24Q9BUV8 137 aa7.56□□□□□ -1.2
GGA3-219ENST00000584550 NUDT15Q9NV35 164 aa7.56□□□□□ -1.2
GGA3-219ENST00000584550 TBC1D24Q9ULP9 559 aa7.56□□□□□ -1.2
GGA3-219ENST00000584550 TMED3Q9Y3Q3 217 aa7.56□□□□□ -1.2
GGA3-219ENST00000584550 DYNC1H1Q14204 4646 aaKnown RBP7.56□□□□□ -1.2
GGA3-219ENST00000584550 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
GGA3-219ENST00000584550 ZNF207O43670 478 aaKnown RBP7.55□□□□□ -1.2
GGA3-219ENST00000584550 GNG7O60262 68 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 YIF1AO95070 293 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 IFNA21P01568 189 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 H2AFB2P0C5Z0 115 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 IAPPP10997 89 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 OPRK1P41145 380 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 HTR2BP41595 481 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 ASAH1Q13510 395 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 TM4SF20Q53R12 229 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 UNQ9165/PRO28630Q6UXU0 137 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 Q6ZWC4 215 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 TMEM217Q8N7C4 229 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 DUSP18Q8NEJ0 188 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 SLC24A4Q8NFF2 622 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 DTD1Q8TEA8 209 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 MAGT1Q9H0U3 335 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 TECRQ9NZ01 308 aaKnown RBP7.55□□□□□ -1.2
GGA3-219ENST00000584550 PLA2G2EQ9NZK7 142 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 HSPB7Q9UBY9 170 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 CACFD1Q9UGQ2 172 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 PAIP2BQ9ULR5 123 aaKnown RBP7.55□□□□□ -1.2
GGA3-219ENST00000584550 DNAH17Q9UFH2 4485 aa7.55□□□□□ -1.2
GGA3-219ENST00000584550 MPTX1A8MV57 137 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 LGALS9O00182 355 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 CORTO00230 105 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 NUPL2O15504 423 aaKnown RBP7.54□□□□□ -1.2
GGA3-219ENST00000584550 CTSGP08311 255 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 CBLN1P23435 193 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 NPY1RP25929 384 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 ADMP35318 185 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 NPBWR1P48145 328 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 APOC4P55056 127 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 IFITM3Q01628 133 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 C2orf83Q53S99 150 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 SPSB3Q6PJ21 355 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 LINC00336Q6ZUF6 198 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 ENKURQ8TC29 256 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 SEC22CQ9BRL7 303 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 FNDC4Q9H6D8 234 aaPredicted RBP7.54□□□□□ -1.2
GGA3-219ENST00000584550 UBQLN2Q9UHD9 624 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 TP53TG1Q9Y2A0 90 aa7.54□□□□□ -1.2
GGA3-219ENST00000584550 TMEM213A2RRL7 107 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 FAM25EA8MYX2 175 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 WRBO00258 174 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 PITX3O75364 302 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 IFNA4P05014 189 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 SLC25A6P12236 298 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 ATF4P18848 351 aaPredicted RBP7.53□□□□□ -1.2
GGA3-219ENST00000584550 BSXQ3C1V8 233 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 PVRIGQ6DKI7 326 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 TMEM170AQ8WVE7 144 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 RNF183Q96D59 192 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 TXN2Q99757 166 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 ZNF436Q9C0F3 470 aaPredicted RBP7.53□□□□□ -1.2
GGA3-219ENST00000584550 MRPL36Q9P0J6 103 aaKnown RBP7.53□□□□□ -1.2
GGA3-219ENST00000584550 GSKIPQ9P0R6 139 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 MLXQ9UH92 298 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 UFC1Q9Y3C8 167 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 U3KQ87 197 aa7.53□□□□□ -1.2
GGA3-219ENST00000584550 DNAH11Q96DT5 4516 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 IGHV3-49A0A0A0MS15 119 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 RPS10-NUDT3A0A1W2PQS6 291 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 PRSS29PA6NIE9 313 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 IGLL5B9A064 214 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 NDUFA4O00483 81 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 CCSO14618 274 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 MED6O75586 246 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 TMEM50AO95807 157 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 SCGB1D2O95969 90 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 RPL35AP18077 110 aaKnown RBP7.52□□□□□ -1.21
GGA3-219ENST00000584550 RELQ04864 619 aaPredicted RBP7.52□□□□□ -1.21
GGA3-219ENST00000584550 IAH1Q2TAA2 248 aaPredicted RBP7.52□□□□□ -1.21
GGA3-219ENST00000584550 BTNL8Q6UX41 500 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 NOXA1Q86UR1 476 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 STPG3Q8N7X2 389 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 C11orf45Q8TAV5 145 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 ZNF431Q8TF32 576 aaPredicted RBP7.52□□□□□ -1.21
GGA3-219ENST00000584550 C2CD4CQ8TF44 421 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 MITD1Q8WV92 249 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 TMEM190Q8WZ59 177 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 ACY3Q96HD9 319 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 ATP6V0BQ99437 205 aa7.52□□□□□ -1.21
GGA3-219ENST00000584550 A8MWP6 167 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 FAM90A26D6RGX4 464 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 SYNGR2O43760 224 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 CLN5O75503 358 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 FCGR2BP31994 310 aaPredicted RBP7.51□□□□□ -1.21
GGA3-219ENST00000584550 NKX2-1P43699 371 aaPredicted RBP7.51□□□□□ -1.21
GGA3-219ENST00000584550 RND2P52198 227 aa7.51□□□□□ -1.21
GGA3-219ENST00000584550 DEFA1P59665 94 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms