RNA–Protein interactions for RNA: ENST00000582629.1

ITGB4-208, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 458 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-208ENST00000582629 MARCH1Q8TCQ1 289 aa10.49□□□□□ -0.73
ITGB4-208ENST00000582629 ABHD1Q96SE0 405 aa10.49□□□□□ -0.73
ITGB4-208ENST00000582629 TMEM222Q9H0R3 208 aa10.49□□□□□ -0.73
ITGB4-208ENST00000582629 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.49□□□□□ -0.73
ITGB4-208ENST00000582629 X6R8D5 127 aa10.49□□□□□ -0.73
ITGB4-208ENST00000582629 TRAV10A0A0B4J240 114 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 GABARAPO95166 117 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 HNRNPCP07910 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
ITGB4-208ENST00000582629 IGLC1P0CG04 106 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 SLC25A4P12235 298 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 RND2P52198 227 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 AP2S1P53680 142 aaPredicted RBP10.48□□□□□ -0.73
ITGB4-208ENST00000582629 C2orf83Q53S99 150 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 PRSS54Q6PEW0 395 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 C16orf54Q6UWD8 224 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 RNASEH2CQ8TDP1 164 aaKnown RBP10.48□□□□□ -0.73
ITGB4-208ENST00000582629 Q8WTZ3 238 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 GLMPQ8WWB7 406 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 RBPMSQ93062 196 aaKnown RBP10.48□□□□□ -0.73
ITGB4-208ENST00000582629 HEYLQ9NQ87 328 aaPredicted RBP10.48□□□□□ -0.73
ITGB4-208ENST00000582629 TBC1D24Q9ULP9 559 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 C14orf166Q9Y224 244 aaKnown RBP10.48□□□□□ -0.73
ITGB4-208ENST00000582629 HECTD4Q9Y4D8 3996 aa10.48□□□□□ -0.73
ITGB4-208ENST00000582629 ELOA3CA0A087WX78 387 aaPredicted RBP10.47□□□□□ -0.73
ITGB4-208ENST00000582629 TEX13DA0A0J9YY54 714 aaPredicted RBP10.47□□□□□ -0.73
ITGB4-208ENST00000582629 GABARAPH6UMI1 98 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 OR10J1P30954 320 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 YPEL3P61236 119 aaPredicted RBP10.47□□□□□ -0.73
ITGB4-208ENST00000582629 DHODHQ02127 395 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 SSBP1Q04837 148 aaKnown RBP10.47□□□□□ -0.73
ITGB4-208ENST00000582629 MEF2DQ14814 521 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 CTF1Q16619 201 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 PSMG4Q5JS54 123 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 Q6ZTC4 211 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 SELENOHQ8IZQ5 122 aaKnown RBP10.47□□□□□ -0.73
ITGB4-208ENST00000582629 CSNK1G2-AS1Q8NCQ2 148 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 SLC24A4Q8NFF2 622 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 LHFPL5Q8TAF8 219 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 GLYATL2Q8WU03 294 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 KRTAP17-1Q9BYP8 105 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 NAA50Q9GZZ1 169 aaKnown RBP10.47□□□□□ -0.73
ITGB4-208ENST00000582629 NAA60Q9H7X0 242 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 CLEC5AQ9NY25 188 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 CACNG5Q9UF02 275 aa10.47□□□□□ -0.73
ITGB4-208ENST00000582629 CEBPZOSA8MTT3 80 aa10.46□□□□□ -0.73
ITGB4-208ENST00000582629 MRPS10P82664 201 aaKnown RBP10.46□□□□□ -0.73
ITGB4-208ENST00000582629 SURF2Q15527 256 aaPredicted RBP10.46□□□□□ -0.73
ITGB4-208ENST00000582629 ETFRF1Q6IPR1 90 aa10.46□□□□□ -0.73
ITGB4-208ENST00000582629 RAB40CQ96S21 281 aa10.46□□□□□ -0.73
ITGB4-208ENST00000582629 RTBDNQ9BSG5 229 aaPredicted RBP10.46□□□□□ -0.73
ITGB4-208ENST00000582629 IGHV4-4A0A075B6R2 117 aa10.45□□□□□ -0.74
ITGB4-208ENST00000582629 DISC1C4P0D8 188 aa10.45□□□□□ -0.74
ITGB4-208ENST00000582629 GSTZ1O43708 216 aaPredicted RBP10.45□□□□□ -0.74
ITGB4-208ENST00000582629 IL4P05112 153 aa10.45□□□□□ -0.74
ITGB4-208ENST00000582629 NUTF2P61970 127 aaKnown RBP10.45□□□□□ -0.74
ITGB4-208ENST00000582629 SNRPD3P62318 126 aaKnown RBP10.45□□□□□ -0.74
ITGB4-208ENST00000582629 USF2Q15853 346 aaPredicted RBP10.45□□□□□ -0.74
ITGB4-208ENST00000582629 GPR107Q5VW38 600 aa10.45□□□□□ -0.74
ITGB4-208ENST00000582629 FAAP20Q6NZ36 180 aa10.45□□□□□ -0.74
ITGB4-208ENST00000582629 NOXA1Q86UR1 476 aa10.45□□□□□ -0.74
ITGB4-208ENST00000582629 GPR146Q96CH1 333 aa10.45□□□□□ -0.74
ITGB4-208ENST00000582629 RNF126Q9BV68 326 aa10.45□□□□□ -0.74
ITGB4-208ENST00000582629 C1QTNF4Q9BXJ3 329 aa10.45□□□□□ -0.74
ITGB4-208ENST00000582629 SEPSECSQ9HD40 501 aaKnown RBP10.45□□□□□ -0.74
ITGB4-208ENST00000582629 CACFD1Q9UGQ2 172 aa10.45□□□□□ -0.74
ITGB4-208ENST00000582629 CRYM-AS1A6NIL9 109 aa10.44□□□□□ -0.74
ITGB4-208ENST00000582629 FAM90A26D6RGX4 464 aa10.44□□□□□ -0.74
ITGB4-208ENST00000582629 TOMM40O96008 361 aa10.44□□□□□ -0.74
ITGB4-208ENST00000582629 NPY1RP25929 384 aa10.44□□□□□ -0.74
ITGB4-208ENST00000582629 TMEM268Q5VZI3 342 aa10.44□□□□□ -0.74
ITGB4-208ENST00000582629 TMEM170AQ8WVE7 144 aa10.44□□□□□ -0.74
ITGB4-208ENST00000582629 MIXL1Q9H2W2 232 aa10.44□□□□□ -0.74
ITGB4-208ENST00000582629 NRN1Q9NPD7 142 aa10.44□□□□□ -0.74
ITGB4-208ENST00000582629 TMEM56-RWDD3S4R434 201 aa10.44□□□□□ -0.74
ITGB4-208ENST00000582629 BUB3O43684 328 aa10.43□□□□□ -0.74
ITGB4-208ENST00000582629 AKAIN1P0CW23 69 aa10.43□□□□□ -0.74
ITGB4-208ENST00000582629 RD3LP0DJH9 198 aa10.43□□□□□ -0.74
ITGB4-208ENST00000582629 SIGLEC15Q6ZMC9 328 aa10.43□□□□□ -0.74
ITGB4-208ENST00000582629 SMIM4Q8WVI0 70 aa10.43□□□□□ -0.74
ITGB4-208ENST00000582629 NPIPB3Q92617 1050 aa10.43□□□□□ -0.74
ITGB4-208ENST00000582629 ACY3Q96HD9 319 aa10.43□□□□□ -0.74
ITGB4-208ENST00000582629 MRPS26Q9BYN8 205 aaKnown RBP10.43□□□□□ -0.74
ITGB4-208ENST00000582629 CELA1Q9UNI1 258 aa10.43□□□□□ -0.74
ITGB4-208ENST00000582629 GPR132Q9UNW8 380 aa10.43□□□□□ -0.74
ITGB4-208ENST00000582629 FAT2Q9NYQ8 4349 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 DEFB131BA0A096LNP1 70 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 RGS5O15539 181 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 NXPH3O95157 252 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 AMBPP02760 352 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 SULT1A3P0DMM9 295 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 SULT1A4P0DMN0 295 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 NUP62P37198 522 aaPredicted RBP10.42□□□□□ -0.74
ITGB4-208ENST00000582629 ALDH3B2P48448 385 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 C12orf74Q32Q52 190 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 NMSQ5H8A3 153 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 OR4C16Q8NGL9 310 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 IL22RA2Q969J5 263 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 PRRT1Q99946 306 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 KIAA1109Q2LD37 5005 aa10.42□□□□□ -0.74
ITGB4-208ENST00000582629 DNAH2Q9P225 4427 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms