RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 PPP1R2P1Q96PQ5 205 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 YPEL2Q96QA6 119 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 SERPINI1Q99574 410 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 SIGMAR1Q99720 223 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 LINC00467Q9BRT7 94 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 YIPF3Q9GZM5 350 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 IMUPQ9GZP8 106 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 C14orf105Q9NVL8 296 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 MED9Q9NWA0 146 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 NAT8Q9UHE5 227 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 CYSLTR1Q9Y271 337 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 ERGIC3Q9Y282 383 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 PRELID3BQ9Y3B1 194 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 TIMM22Q9Y584 194 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 SYNMO15061 1565 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 MED1Q15648 1581 aaPredicted RBP0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 SIP14410 1827 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 N4BP2Q86UW6 1770 aaPredicted RBP0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 CAMSAP2Q08AD1 1489 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 CCDC144AA2RUR9 1427 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 UHRF1BP1Q6BDS2 1440 aa0.47□□□□□ -2.33
SMCHD1-206ENST00000581631 MCM3APO60318 1980 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 DSTQ03001 7570 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 ROBO3Q96MS0 1386 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 HECW1Q76N89 1606 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 MYO5AQ9Y4I1 1855 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 SNRNP200O75643 2136 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 ZGRF1Q86YA3 2104 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 HECW2Q9P2P5 1572 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 IGKV3-7A0A075B6H7 116 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 hCG_1818297A0A087WSY0 165 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 A0A087X0T9 212 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 TRGV10A0A0A0MS01 117 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 A0A0D9SEW6 157 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 FAM159BA6NKW6 160 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 A8MT66 165 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 TRAPPC2LH3BP13 241 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 H3BT86 120 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 CYB5BO43169 146 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 CIAO1O76071 339 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 PROSCO94903 275 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 OR5F1O95221 314 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 ZNF682O95780 498 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 IFNA7P01567 189 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 IGKV1-5P01602 117 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 APOA2P02652 100 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 PMP2P02689 132 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 PPBPP02775 128 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 SHBGP04278 402 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 RPSAP08865 295 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 TFPTP0C1Z6 253 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 BAALC-AS2P0C853 105 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 ERP29P30040 261 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 S100A5P33763 92 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 CAPZBP47756 277 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 EIF2B2P49770 351 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 CDC42P60953 191 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 RPL19P84098 196 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 MYL5Q02045 173 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 KRR1Q13601 381 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 RHEBQ15382 184 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 KHDC3LQ587J8 217 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 BCL2L15Q5TBC7 163 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 FAM27BQ5VT28 67 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 DHRS4L2Q6PKH6 230 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 Q6Q795 121 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 UNQ6190/PRO20217Q6UXQ8 127 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 ZNF826PQ6ZT77 177 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 GOLT1AQ6ZVE7 132 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 PHF13Q86YI8 300 aaPredicted RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 C12orf45Q8N5I9 185 aaPredicted RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 SIGLECL1Q8N7X8 197 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 C12orf29Q8N999 325 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 C9orf163Q8N9P6 203 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 ZNF439Q8NDP4 499 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 WFDC11Q8NEX6 87 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 OR4E2Q8NGC2 313 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 OR8B3Q8NGG8 313 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 TERB2Q8NHR7 220 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 PFN4Q8NHR9 129 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 TEX47Q8TBZ9 253 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 FAM172AQ8WUF8 416 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 C4orf3Q8WVX3 66 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 CEP19Q96LK0 163 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 PHB2Q99623 299 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 GINS4Q9BRT9 223 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 CCDC94Q9BW85 323 aaPredicted RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 OR8D2Q9GZM6 311 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 C11orf68Q9H3H3 251 aaKnown RBP0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 ENY2Q9NPA8 101 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 CISHQ9NSE2 258 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 ARMC1Q9NVT9 282 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 CMTM6Q9NX76 183 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 IDI2-AS1Q9NZ38 188 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 OR5AC2Q9NZP5 309 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 PYCARDQ9ULZ3 195 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 EPDR1Q9UM22 224 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 HS3ST2Q9Y278 367 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 PKIGQ9Y2B9 76 aa0.46□□□□□ -2.34
SMCHD1-206ENST00000581631 SLC35A3Q9Y2D2 325 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms