RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 CGB1A6NKQ9 187 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 H3BTX0 84 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 FAM87AP0C7U9 286 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 GNG4P50150 75 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 LCN2P80188 198 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 POU2AF1Q16633 256 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 NUP37Q8NFH4 326 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 CORO2AQ92828 525 aa8.48□□□□□ -1.05
TOP3A-209ENST00000580095 ARHGAP32A7KAX9 2087 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 NDUFB3O43676 98 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 SCGB1D1O95968 90 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 FOXC1Q12948 553 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 FOXL1Q12952 345 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 C1orf194Q5T5A4 169 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 LINC00574Q9H8X3 128 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 NDUFA4L2Q9NRX3 87 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 SERTAD4Q9NUC0 356 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 ZNF257Q9Y2Q1 563 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 LY6HO94772 140 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 MOSP00540 346 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 NBEAP1P0C6P0 100 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 CD99P14209 185 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 CD69Q07108 199 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 COA6Q5JTJ3 125 aaKnown RBP8.47□□□□□ -1.05
TOP3A-209ENST00000580095 ZNF705AQ6ZN79 300 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-209ENST00000580095 MMD2Q8IY49 270 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 GBGT1Q8N5D6 347 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 SSBP3Q9BWW4 388 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-209ENST00000580095 E7EQL1 145 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 FCN1O00602 326 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 MT-CO2P00403 227 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 GCGP01275 180 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 LOXP28300 417 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-209ENST00000580095 GRNP28799 593 aaKnown RBP8.47□□□□□ -1.05
TOP3A-209ENST00000580095 UBE2L3P68036 154 aaKnown RBP8.47□□□□□ -1.05
TOP3A-209ENST00000580095 BATFQ16520 125 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 OR5AU1Q8NGC0 362 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 OR5AN1Q8NGI8 311 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 OR1L8Q8NGR8 309 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 OR5B3Q8NH48 314 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 RNASE6Q93091 150 aaKnown RBP8.47□□□□□ -1.05
TOP3A-209ENST00000580095 TMEM18Q96B42 140 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 CLEC5AQ9NY25 188 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 BET1LQ9NYM9 111 aa8.47□□□□□ -1.05
TOP3A-209ENST00000580095 TECRQ9NZ01 308 aaKnown RBP8.47□□□□□ -1.05
TOP3A-209ENST00000580095 POLR3KQ9Y2Y1 108 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-209ENST00000580095 HRNRQ86YZ3 2850 aaPredicted RBP8.47□□□□□ -1.05
TOP3A-209ENST00000580095 NDUFB8O95169 186 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 OR5G3P0C626 314 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 C3orf36Q3SXR2 165 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 C2orf83Q53S99 150 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 LRRC10Q5BKY1 277 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 MRPL54Q6P161 138 aaKnown RBP8.46□□□□□ -1.06
TOP3A-209ENST00000580095 ST6GALNAC3Q8NDV1 305 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 LINC01560Q8TB33 94 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 SLC25A33Q9BSK2 321 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 MRPL18Q9H0U6 180 aaKnown RBP8.46□□□□□ -1.06
TOP3A-209ENST00000580095 TP53TG3Q9ULZ0 132 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 SNURFLB1AK76 121 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 ORM2P19652 201 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 APOBEC3AP31941 199 aaPredicted RBP8.46□□□□□ -1.06
TOP3A-209ENST00000580095 PDLIM4P50479 330 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 ERHP84090 104 aaKnown RBP8.46□□□□□ -1.06
TOP3A-209ENST00000580095 OSR1Q8TAX0 266 aaPredicted RBP8.46□□□□□ -1.06
TOP3A-209ENST00000580095 FAM168AQ92567 244 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 SLC35E1Q96K37 410 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 ZNF355PQ9NSJ1 428 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 IL36BQ9NZH7 164 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 V9GYV3 84 aa8.46□□□□□ -1.06
TOP3A-209ENST00000580095 AREGP15514 252 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 GNG5P63218 68 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 OR4C13Q8NGP0 309 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 BLNKQ8WV28 456 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 SLC25A2Q9BXI2 301 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 A0A1W2PPI3 338 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 SERF1AO75920 110 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 IGLV2-23P01705 113 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 COX7A1P24310 79 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 LINC00310P59036 64 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 TDRG1Q3Y452 100 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 PRR27Q6MZM9 219 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 PATE2Q6UY27 113 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 C11orf52Q96A22 123 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 FAM167A-AS1Q96KT0 104 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 WNK2Q9Y3S1 2297 aa8.45□□□□□ -1.06
TOP3A-209ENST00000580095 SHISA9B4DS77 424 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 DLL1O00548 723 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 COX7A2P2O60397 106 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 C8orf88P0DMB2 117 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 RANP62826 216 aaKnown RBP8.44□□□□□ -1.06
TOP3A-209ENST00000580095 RPEL1Q2QD12 228 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 MS4A10Q96PG2 267 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 FAM103A1Q9BTL3 118 aaKnown RBP8.44□□□□□ -1.06
TOP3A-209ENST00000580095 TMEM167BQ9NRX6 74 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 FKBP11Q9NYL4 201 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 NHLH1Q02575 133 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 MEF2CQ06413 473 aaPredicted RBP8.44□□□□□ -1.06
TOP3A-209ENST00000580095 SPACA3Q8IXA5 215 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 TXNDC17Q9BRA2 123 aa8.44□□□□□ -1.06
TOP3A-209ENST00000580095 SERTM2A0A1B0GWG4 89 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms