RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 APOHP02749 345 aaPredicted RBP9.94□□□□□ -0.82
ERBB2-206ENST00000578373 IGKV1D-39P04432 117 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 STAG3L2P0CL84 134 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 STAG3L3P0CL85 134 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 PPIFP30405 207 aaKnown RBP9.94□□□□□ -0.82
ERBB2-206ENST00000578373 RPL13AP40429 203 aaKnown RBP9.94□□□□□ -0.82
ERBB2-206ENST00000578373 MRPL32Q9BYC8 188 aaKnown RBP9.94□□□□□ -0.82
ERBB2-206ENST00000578373 A0A0C4DFX4 3053 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 TRAV1-1A0A0B4J248 108 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 A6NDN8 102 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 SRRM5B3KS81 715 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 IGKV1D-33P01593 117 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 IGKV1-33P01594 117 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 DLX1P56177 255 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 RBPMS2Q6ZRY4 209 aaKnown RBP9.94□□□□□ -0.82
ERBB2-206ENST00000578373 ZNF664Q8N3J9 261 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 SS18L1O75177 396 aaPredicted RBP9.94□□□□□ -0.82
ERBB2-206ENST00000578373 PSMB2P49721 201 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 PRDM13Q9H4Q3 707 aa9.94□□□□□ -0.82
ERBB2-206ENST00000578373 KIAA1671Q9BY89 1806 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 H7C2G1 150 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 NDUFA2O43678 99 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 IGKV1-16P04430 117 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 CD69Q07108 199 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 KLF17Q5JT82 389 aaPredicted RBP9.93□□□□□ -0.82
ERBB2-206ENST00000578373 CDPF1Q6NVV7 123 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 C19orf24Q9BVV8 132 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 Q9H3A6 140 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 IGHV1-46P01743 117 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 TRAV8-1A0A0A6YYK1 113 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 ASCL4Q6XD76 172 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 OR10AG1Q8NH19 301 aa9.93□□□□□ -0.82
ERBB2-206ENST00000578373 LY6G6EA0A0G2JKS1 128 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 FAM106CPP0CH98 169 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 ZNF726P1Q15940 193 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 GPR82Q96P67 336 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 U3KQA8 63 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 TRBV9A0A0B4J1U6 114 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 TRAV8-6A0A0B4J262 113 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 C12orf54Q6X4T0 127 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 PLA2G2EQ9NZK7 142 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 OTOGLQ3ZCN5 2332 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 IGKV1D-17A0A075B6S4 117 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 GFRA3O60609 400 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 LY6HO94772 140 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 FXYD7P58549 80 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 FOXL2NBQ6ZUU3 175 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 LAMTOR2Q9Y2Q5 125 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 COL4A3Q01955 1670 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 ZNF883P0CG24 379 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 DTX1Q86Y01 620 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 DMRTC2Q8IXT2 367 aaPredicted RBP9.92□□□□□ -0.82
ERBB2-206ENST00000578373 C1orf162Q8NEQ5 155 aaPredicted RBP9.92□□□□□ -0.82
ERBB2-206ENST00000578373 MIEN1Q9BRT3 115 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 LINC00312Q9Y6C7 94 aa9.92□□□□□ -0.82
ERBB2-206ENST00000578373 LOC105371242A0A075B767 164 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 A0A1B0GUT8 65 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 H3BVH4 76 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 LIPFP07098 398 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 GPR183P32249 361 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 ZNF138P52744 262 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 IL15RAQ13261 267 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 RPRMLQ8N4K4 120 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 SORL1Q92673 2214 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 MED12LQ86YW9 2145 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 NACAE9PAV3 2078 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 CHD3Q12873 2000 aaKnown RBP9.91□□□□□ -0.82
ERBB2-206ENST00000578373 LOC107984156A0A0G2JMH3 177 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 K7ERU9 68 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 CIDEAO60543 219 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 ZNF324O75467 553 aaPredicted RBP9.91□□□□□ -0.82
ERBB2-206ENST00000578373 CX3CL1P78423 397 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 ARL17AQ8IVW1 177 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 PIEZO1Q92508 2521 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 NPIPB11E5RHQ5 1161 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 DUX4L9Q6RFH8 374 aaPredicted RBP9.91□□□□□ -0.82
ERBB2-206ENST00000578373 WDR86Q86TI4 376 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 EXOC3-AS1Q8N2X6 119 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 TEX45Q8NA69 505 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 DEFB104AQ8WTQ1 72 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 RPP21Q9H633 154 aaKnown RBP9.91□□□□□ -0.82
ERBB2-206ENST00000578373 TMEM242Q9NWH2 141 aa9.91□□□□□ -0.82
ERBB2-206ENST00000578373 PRCDQ00LT1 54 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 COLCA1Q6ZS62 124 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 NAA38Q9BRA0 125 aaKnown RBP9.9□□□□□ -0.82
ERBB2-206ENST00000578373 FRMPD3Q5JV73 1810 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 IZUMO1RA6ND01 250 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 ETV2O00321 342 aaPredicted RBP9.9□□□□□ -0.82
ERBB2-206ENST00000578373 CACNG8Q8WXS5 425 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 TMEM160Q9NX00 188 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 ELOVL5Q9NYP7 299 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 LINC00527Q9UJ94 153 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 RPUSD1Q9UJJ7 312 aaKnown RBP9.9□□□□□ -0.82
ERBB2-206ENST00000578373 ANAPC10Q9UM13 185 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 TRBV20OR9-2A0A075B6H5 130 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 M0R381 172 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 METTL26Q96S19 204 aa9.9□□□□□ -0.82
ERBB2-206ENST00000578373 A0A1B0GW64 132 aa9.9□□□□□ -0.83
ERBB2-206ENST00000578373 M0R3E3 92 aa9.9□□□□□ -0.83
ERBB2-206ENST00000578373 FAM74A4Q5TZK3 123 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms